RNA–Protein interactions for RNA: ENST00000567982.5

POLR2C-208, Transcript of RNA polymerase II subunit C, human

TSL 2

Gene POLR2C, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2C-208	ENST00000567982	ZBTB43	O43298	467 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	DDAH1	O94760	285 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	TTLL1	O95922	423 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	TOP1	P11387	765 aa	Known RBP	13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	SOX10	P56693	466 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	SEPT2	Q15019	361 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	PPP4R3B	Q5MIZ7	849 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	PRPF38B	Q5VTL8	546 aa	Known RBP	13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	CDC37L1	Q7L3B6	337 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	CATIP	Q7Z7H3	387 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	MICU3	Q86XE3	530 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	RAB11FIP4	Q86YS3	637 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	MKL1	Q969V6	931 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	CDCA5	Q96FF9	252 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	MYL10	Q9BUA6	226 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	KAT14	Q9H8E8	782 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	CABP5	Q9NP86	173 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	NYAP2	Q9P242	653 aa		13.59	□□□□□ -0.23
POLR2C-208	ENST00000567982	CTNND1	O60716	968 aa	Known RBP	13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	RXRA	P19793	462 aa		13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	CCT2	P78371	535 aa	Known RBP	13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	SYNE3	Q6ZMZ3	975 aa		13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	SPRYD3	Q8NCJ5	442 aa		13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	PNMA1	Q8ND90	353 aa		13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	MAP3K14	Q99558	947 aa		13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	NCOA5	Q9HCD5	579 aa	Known RBP	13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	GINM1	Q9NU53	330 aa		13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.58	□□□□□ -0.24
POLR2C-208	ENST00000567982	GOLGA8A	A7E2F4	631 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	USP2	O75604	605 aa	Predicted RBP	13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	CTDNEP1	O95476	244 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	HSP90AA1	P07900	732 aa	Known RBP	13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	ASNS	P08243	561 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	CALM1	P0DP23	149 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	CALM2	P0DP24	149 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	CALM3	P0DP25	149 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	EEF2	P13639	858 aa	Known RBP	13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	CDC27	P30260	824 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	DDIT3	P35638	169 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	METAP2	P50579	478 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	ICA1	Q05084	483 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	RAB3GAP1	Q15042	981 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	PPP2R5B	Q15173	497 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	FANCB	Q8NB91	859 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	SMARCC2	Q8TAQ2	1214 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	CHMP4C	Q96CF2	233 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	ZIC5	Q96T25	663 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	LLPH	Q9BRT6	129 aa	Known RBP	13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	FOXD4L1	Q9NU39	408 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	CLIP2	Q9UDT6	1046 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	FZD1	Q9UP38	647 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	PAPPA2	Q9BXP8	1791 aa		13.57	□□□□□ -0.24
POLR2C-208	ENST00000567982	ATAD5	Q96QE3	1844 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	DHX16	O60231	1041 aa	Known RBP	13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	INPP5B	P32019	993 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	ADD1	P35611	737 aa	Known RBP	13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	NOG	Q13253	232 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	NTRK3	Q16288	839 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	RTN1	Q16799	776 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	CCDC144CP	Q8IYA2	1237 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	SCYL3	Q8IZE3	742 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	LRRC47	Q8N1G4	583 aa	Known RBP	13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	NSUN7	Q8NE18	718 aa	Known RBP	13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	NUP133	Q8WUM0	1156 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	WRNIP1	Q96S55	665 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	ZNF408	Q9H9D4	720 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	SYNPO2	Q9UMS6	1093 aa		13.56	□□□□□ -0.24
POLR2C-208	ENST00000567982	DOCK1	Q14185	1865 aa		13.55	□□□□□ -0.24
POLR2C-208	ENST00000567982		A0A1W2PRG0	241 aa		13.55	□□□□□ -0.24
POLR2C-208	ENST00000567982	SNHG28	P0DPA3	235 aa		13.55	□□□□□ -0.24
POLR2C-208	ENST00000567982	GRM4	Q14833	912 aa		13.55	□□□□□ -0.24
POLR2C-208	ENST00000567982	MAP3K11	Q16584	847 aa		13.55	□□□□□ -0.24
POLR2C-208	ENST00000567982	NOL9	Q5SY16	702 aa	Known RBP	13.55	□□□□□ -0.24
POLR2C-208	ENST00000567982	CWC22	Q9HCG8	908 aa	Known RBP	13.55	□□□□□ -0.24
POLR2C-208	ENST00000567982	RBM28	Q9NW13	759 aa	Known RBP	13.55	□□□□□ -0.24
POLR2C-208	ENST00000567982	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.55	□□□□□ -0.24
POLR2C-208	ENST00000567982	CCDC196	A0A1B0GTZ2	297 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	PALM3	A6NDB9	673 aa	Predicted RBP	13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	PPP1R12B	O60237	982 aa	Predicted RBP	13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	JAK2	O60674	1132 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	DTNB	O60941	627 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	PDHB	P11177	359 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	NF2	P35240	595 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	ATP2B2	Q01814	1243 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	FUT2	Q10981	343 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	RASGRP2	Q7LDG7	609 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	GMCL1P1	Q8NEA9	526 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	CTCFL	Q8NI51	663 aa	Predicted RBP	13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	ACER1	Q8TDN7	264 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	MAD2L2	Q9UI95	211 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	SMC3	Q9UQE7	1217 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	TMX2	Q9Y320	296 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	MYH4	Q9Y623	1939 aa		13.54	□□□□□ -0.24
POLR2C-208	ENST00000567982	PTPDC1	A2A3K4	754 aa		13.53	□□□□□ -0.24
POLR2C-208	ENST00000567982	USP17L5	A8MUK1	530 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms