RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 TMX2Q9Y320 296 aa30.08■■■□□ 2.41
FANCA-228ENST00000567943 PXYLP1Q8TE99 480 aa30.07■■■□□ 2.4
FANCA-228ENST00000567943 RILPL2Q969X0 211 aa30.07■■■□□ 2.4
FANCA-228ENST00000567943 PAGR1Q9BTK6 254 aa30.07■■■□□ 2.4
FANCA-228ENST00000567943 TDO2P48775 406 aa30.06■■■□□ 2.4
FANCA-228ENST00000567943 LBX2Q6XYB7 198 aa30.06■■■□□ 2.4
FANCA-228ENST00000567943 GTF3C2Q8WUA4 911 aaPredicted RBP30.06■■■□□ 2.4
FANCA-228ENST00000567943 SPDYE16A6NNV3 312 aaPredicted RBP30.05■■■□□ 2.4
FANCA-228ENST00000567943 EEF2P13639 858 aaKnown RBP30.05■■■□□ 2.4
FANCA-228ENST00000567943 RABGAP1Q9Y3P9 1069 aa30.05■■■□□ 2.4
FANCA-228ENST00000567943 A0A0G2JMZ2 1700 aa30.05■■■□□ 2.4
FANCA-228ENST00000567943 CCL5P13501 91 aa30.04■■■□□ 2.4
FANCA-228ENST00000567943 KANSL2Q9H9L4 492 aa30.04■■■□□ 2.4
FANCA-228ENST00000567943 ARHGEF10LQ9HCE6 1279 aa30.04■■■□□ 2.4
FANCA-228ENST00000567943 BTBD7Q9P203 1132 aa30.04■■■□□ 2.4
FANCA-228ENST00000567943 PDE4AP27815 886 aa30.03■■■□□ 2.4
FANCA-228ENST00000567943 SPICE1Q8N0Z3 855 aa30.03■■■□□ 2.4
FANCA-228ENST00000567943 NACAP1Q9BZK3 213 aa30.03■■■□□ 2.4
FANCA-228ENST00000567943 VCPKMTQ9H867 229 aa30.03■■■□□ 2.4
FANCA-228ENST00000567943 BIN2Q9UBW5 565 aaPredicted RBP30.03■■■□□ 2.4
FANCA-228ENST00000567943 INHAP05111 366 aa30.02■■■□□ 2.4
FANCA-228ENST00000567943 VPS53Q5VIR6 699 aa30.02■■■□□ 2.4
FANCA-228ENST00000567943 LPAR1Q92633 364 aa30.02■■■□□ 2.4
FANCA-228ENST00000567943 SHISA4Q96DD7 197 aa30.02■■■□□ 2.4
FANCA-228ENST00000567943 FAM227BQ96M60 508 aa30.02■■■□□ 2.4
FANCA-228ENST00000567943 UNC93B1Q9H1C4 597 aa30.02■■■□□ 2.4
FANCA-228ENST00000567943 HELLSQ9NRZ9 838 aa30.02■■■□□ 2.4
FANCA-228ENST00000567943 PRDM1O75626 825 aa30.01■■■□□ 2.39
FANCA-228ENST00000567943 TICAM2Q86XR7 235 aa30.01■■■□□ 2.39
FANCA-228ENST00000567943 MKNK2Q9HBH9 465 aa30.01■■■□□ 2.39
FANCA-228ENST00000567943 MYH4Q9Y623 1939 aa30■■■□□ 2.39
FANCA-228ENST00000567943 IGKV6D-41A0A0C4DH26 115 aa30■■■□□ 2.39
FANCA-228ENST00000567943 A0A0D9SFI3 127 aa30■■■□□ 2.39
FANCA-228ENST00000567943 MAPK4P31152 587 aa30■■■□□ 2.39
FANCA-228ENST00000567943 UBXN2AP68543 259 aa30■■■□□ 2.39
FANCA-228ENST00000567943 COG2Q14746 738 aa30■■■□□ 2.39
FANCA-228ENST00000567943 GPR142Q7Z601 462 aa30■■■□□ 2.39
FANCA-228ENST00000567943 USP6NLQ92738 828 aa30■■■□□ 2.39
FANCA-228ENST00000567943 TANGO6Q9C0B7 1094 aa30■■■□□ 2.39
FANCA-228ENST00000567943 ATP2B2Q01814 1243 aa29.99■■■□□ 2.39
FANCA-228ENST00000567943 NMIQ13287 307 aaPredicted RBP29.99■■■□□ 2.39
FANCA-228ENST00000567943 RNF208Q9H0X6 261 aa29.99■■■□□ 2.39
FANCA-228ENST00000567943 NAPBQ9H115 298 aa29.99■■■□□ 2.39
FANCA-228ENST00000567943 SH2D4AQ9H788 454 aa29.99■■■□□ 2.39
FANCA-228ENST00000567943 GJB1P08034 283 aa29.98■■■□□ 2.39
FANCA-228ENST00000567943 PPARAQ07869 468 aa29.98■■■□□ 2.39
FANCA-228ENST00000567943 MCMDC2Q4G0Z9 681 aa29.98■■■□□ 2.39
FANCA-228ENST00000567943 MORN1Q5T089 497 aa29.98■■■□□ 2.39
FANCA-228ENST00000567943 COL11A1P12107 1806 aaPredicted RBP29.98■■■□□ 2.39
FANCA-228ENST00000567943 TRIM32Q13049 653 aa29.97■■■□□ 2.39
FANCA-228ENST00000567943 HOXC10Q9NYD6 342 aa29.97■■■□□ 2.39
FANCA-228ENST00000567943 WDR46O15213 610 aaKnown RBP29.96■■■□□ 2.39
FANCA-228ENST00000567943 SDSP20132 328 aa29.96■■■□□ 2.39
FANCA-228ENST00000567943 CYP2B6P20813 491 aa29.96■■■□□ 2.39
FANCA-228ENST00000567943 DSG3P32926 999 aa29.96■■■□□ 2.39
FANCA-228ENST00000567943 GJA8P48165 433 aa29.96■■■□□ 2.39
FANCA-228ENST00000567943 PLEKHH3Q7Z736 793 aa29.96■■■□□ 2.39
FANCA-228ENST00000567943 TRIB2Q92519 343 aa29.96■■■□□ 2.39
FANCA-228ENST00000567943 NUDT12Q9BQG2 462 aa29.96■■■□□ 2.39
FANCA-228ENST00000567943 NYAP2Q9P242 653 aa29.96■■■□□ 2.39
FANCA-228ENST00000567943 TACC3Q9Y6A5 838 aa29.96■■■□□ 2.39
FANCA-228ENST00000567943 ZNF589Q86UQ0 364 aaPredicted RBP29.95■■■□□ 2.39
FANCA-228ENST00000567943 ZNF444Q8N0Y2 327 aaPredicted RBP29.95■■■□□ 2.39
FANCA-228ENST00000567943 SOCS4Q8WXH5 440 aa29.95■■■□□ 2.39
FANCA-228ENST00000567943 INCENPQ9NQS7 918 aa29.95■■■□□ 2.39
FANCA-228ENST00000567943 FLOT1O75955 427 aa29.94■■■□□ 2.38
FANCA-228ENST00000567943 HMGCRP04035 888 aa29.94■■■□□ 2.38
FANCA-228ENST00000567943 XRCC5P13010 732 aaKnown RBP29.94■■■□□ 2.38
FANCA-228ENST00000567943 ATG4CQ96DT6 458 aa29.94■■■□□ 2.38
FANCA-228ENST00000567943 PAK6Q9NQU5 681 aaPredicted RBP29.94■■■□□ 2.38
FANCA-228ENST00000567943 FBXO28Q9NVF7 368 aa29.94■■■□□ 2.38
FANCA-228ENST00000567943 CCNA1P78396 465 aa29.93■■■□□ 2.38
FANCA-228ENST00000567943 CCAR1Q8IX12 1150 aaKnown RBP29.93■■■□□ 2.38
FANCA-228ENST00000567943 U2AF1L4Q8WU68 220 aaKnown RBP29.93■■■□□ 2.38
FANCA-228ENST00000567943 CEP95Q96GE4 821 aa29.93■■■□□ 2.38
FANCA-228ENST00000567943 MOV10L1Q9BXT6 1211 aaKnown RBP29.93■■■□□ 2.38
FANCA-228ENST00000567943 ZNF287Q9HBT7 754 aa29.93■■■□□ 2.38
FANCA-228ENST00000567943 GOPCQ9HD26 462 aa29.93■■■□□ 2.38
FANCA-228ENST00000567943 ADAMTS5Q9UNA0 930 aa29.93■■■□□ 2.38
FANCA-228ENST00000567943 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.93■■■□□ 2.38
FANCA-228ENST00000567943 PLIN4Q96Q06 1357 aa29.92■■■□□ 2.38
FANCA-228ENST00000567943 CTDSPL2Q05D32 466 aa29.92■■■□□ 2.38
FANCA-228ENST00000567943 ALX1Q15699 326 aa29.92■■■□□ 2.38
FANCA-228ENST00000567943 FAM47AQ5JRC9 791 aa29.92■■■□□ 2.38
FANCA-228ENST00000567943 TTC22Q5TAA0 569 aa29.92■■■□□ 2.38
FANCA-228ENST00000567943 MTMR4Q9NYA4 1195 aa29.92■■■□□ 2.38
FANCA-228ENST00000567943 SLC3A2P08195 630 aaKnown RBP29.91■■■□□ 2.38
FANCA-228ENST00000567943 PTPREP23469 700 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 PDE4BQ07343 736 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 CCL14Q16627 93 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 FAM83BQ5T0W9 1011 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 UBE2Q1Q7Z7E8 422 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 NEDD1Q8NHV4 660 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 NUP88Q99567 741 aaPredicted RBP29.91■■■□□ 2.38
FANCA-228ENST00000567943 SPATC1LQ9H0A9 340 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 DIAPH3Q9NSV4 1193 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 CLIP2Q9UDT6 1046 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 ANAPC4Q9UJX5 808 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 CCDC171Q6TFL3 1326 aa29.91■■■□□ 2.38
FANCA-228ENST00000567943 F5H6K3 240 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms