RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 USP17L20D6RJB6 530 aa12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 TTLL1O95922 423 aa12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 PCP11498 1178 aaKnown RBP12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 LACTBP83111 547 aaPredicted RBP12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 USP17L24Q0WX57 530 aa12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 CATSPERGQ6ZRH7 1159 aa12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 TNS4Q8IZW8 715 aa12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 SPICE1Q8N0Z3 855 aa12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 LPAR1Q92633 364 aa12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 P2RX7Q99572 595 aaKnown RBP12.73□□□□□ -0.37
NSMCE1-213ENST00000567710 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 NMT2O60551 498 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 CDC45O75419 566 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 GCLCP48506 637 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 HERVK_113P62684 666 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 ANKRD13CQ8N6S4 541 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 NKX2-3Q8TAU0 364 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 ARHGAP39Q9C0H5 1083 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 MCOLN1Q9GZU1 580 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 GOPCQ9HD26 462 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 IL17RBQ9NRM6 502 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
NSMCE1-213ENST00000567710 WDR46O15213 610 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 RAD21O60216 631 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 CTGFP29279 349 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 KIF22Q14807 665 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 CASC1Q6TDU7 716 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 OTOP1Q7RTM1 612 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 LRRC47Q8N1G4 583 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 GTF3C2Q8WUA4 911 aaPredicted RBP12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 ESR2Q92731 530 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 MKL1Q969V6 931 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 TANGO6Q9C0B7 1094 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 LSG1Q9H089 658 aaKnown RBP12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 EFCC1Q9HA90 598 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 TRIM17Q9Y577 477 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 HTTP42858 3142 aa12.71□□□□□ -0.37
NSMCE1-213ENST00000567710 SPDYE16A6NNV3 312 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 F5H6K3 240 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 NDUFB10O96000 172 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 CYP21A2P08686 494 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 NOVP48745 357 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 NT5C2P49902 561 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 KLRC3Q07444 240 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 TXNRD2Q9NNW7 524 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 ANO2Q9NQ90 1003 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 TCP11L1Q9NUJ3 509 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 MORF4L1Q9UBU8 362 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 STX8Q9UNK0 236 aa12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 RBM8AQ9Y5S9 174 aaKnown RBP12.7□□□□□ -0.38
NSMCE1-213ENST00000567710 B4E1Z4 1266 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 PEX10O60683 326 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 KDM4AO75164 1064 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 FLOT1O75955 427 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 PSMC4P43686 418 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 COG2Q14746 738 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 ARHGEF6Q15052 776 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 PKN2Q16513 984 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 FAM83BQ5T0W9 1011 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 LBX2Q6XYB7 198 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 GMCL1P1Q8NEA9 526 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 TRIM47Q96LD4 638 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 NUP88Q99567 741 aaPredicted RBP12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 PAGR1Q9BTK6 254 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 KRT23Q9C075 422 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 CNNM2Q9H8M5 875 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 RBPJLQ9UBG7 517 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 TAF6LQ9Y6J9 622 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 ZSWIM8A7E2V4 1837 aa12.69□□□□□ -0.38
NSMCE1-213ENST00000567710 CNMDO75829 334 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 FMNL1O95466 1100 aaPredicted RBP12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 FCGRTP55899 365 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 ERVK-9P63128 1117 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 ERVK-24P63145 666 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 SLFN13Q68D06 897 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 GPRC5AQ8NFJ5 357 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 FBXO28Q9NVF7 368 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 HOXC10Q9NYD6 342 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 RABGAP1Q9Y3P9 1069 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
NSMCE1-213ENST00000567710 MYPNQ86TC9 1320 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 GNRH1P01148 92 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 DSG3P32926 999 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 Q3C1V9 767 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 FBXO46Q6PJ61 603 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 IQCA1Q86XH1 822 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 ATG4CQ96DT6 458 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 ZKSCAN3Q9BRR0 538 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 BTBD7Q9P203 1132 aa12.67□□□□□ -0.38
NSMCE1-213ENST00000567710 ZSWIM5Q9P217 1185 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms