RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 TRIM10Q9UDY6 481 aa28.14■■■□□ 2.09
FANCA-221ENST00000566889 PCDHB6Q9Y5E3 794 aa28.14■■■□□ 2.09
FANCA-221ENST00000566889 RNF225M0QZC1 329 aaPredicted RBP28.13■■■□□ 2.09
FANCA-221ENST00000566889 KRT86O43790 486 aa28.13■■■□□ 2.09
FANCA-221ENST00000566889 MICALCLQ6ZW33 695 aa28.13■■■□□ 2.09
FANCA-221ENST00000566889 OTUD6BQ8N6M0 293 aa28.13■■■□□ 2.09
FANCA-221ENST00000566889 BANK1Q8NDB2 785 aa28.13■■■□□ 2.09
FANCA-221ENST00000566889 OR8K1Q8NGG5 319 aa28.13■■■□□ 2.09
FANCA-221ENST00000566889 PLBD2Q8NHP8 589 aa28.13■■■□□ 2.09
FANCA-221ENST00000566889 ALS2CLQ60I27 953 aa28.12■■■□□ 2.09
FANCA-221ENST00000566889 YTHDF3Q7Z739 585 aaKnown RBP28.12■■■□□ 2.09
FANCA-221ENST00000566889 CHP1Q99653 195 aa28.12■■■□□ 2.09
FANCA-221ENST00000566889 PAGR1Q9BTK6 254 aa28.12■■■□□ 2.09
FANCA-221ENST00000566889 C21orf2O43822 256 aa28.12■■■□□ 2.09
FANCA-221ENST00000566889 ZMYND10O75800 440 aa28.12■■■□□ 2.09
FANCA-221ENST00000566889 LIFRP42702 1097 aa28.12■■■□□ 2.09
FANCA-221ENST00000566889 SLC39A6Q13433 755 aa28.12■■■□□ 2.09
FANCA-221ENST00000566889 CAPZA3Q96KX2 299 aa28.12■■■□□ 2.09
FANCA-221ENST00000566889 NID2Q14112 1375 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 H0YHG0 523 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 MEFVO15553 781 aaPredicted RBP28.11■■■□□ 2.09
FANCA-221ENST00000566889 ZEB2O60315 1214 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 SRGAP2O75044 1071 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 GPTP24298 496 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 AFMP43652 599 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 ITIH3Q06033 890 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 LRRC24Q50LG9 513 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 USP49Q70CQ1 688 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 TBC1D10CQ8IV04 446 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 GSPT2Q8IYD1 628 aaKnown RBP28.11■■■□□ 2.09
FANCA-221ENST00000566889 MMGT1Q8N4V1 131 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 SLC52A2Q9HAB3 445 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 LY9Q9HBG7 655 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 RWDD2AQ9UIY3 292 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 CTNND2Q9UQB3 1225 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 NDUFAB1O14561 156 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 CDC25AP30304 524 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 TTF1Q15361 905 aaPredicted RBP28.11■■■□□ 2.09
FANCA-221ENST00000566889 TRIM22Q8IYM9 498 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 EHD4Q9H223 541 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 VPS16Q9H269 839 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 CEP126Q9P2H0 1117 aa28.11■■■□□ 2.09
FANCA-221ENST00000566889 SNRPA1P09661 255 aaKnown RBP28.1■■■□□ 2.09
FANCA-221ENST00000566889 TSR1Q2NL82 804 aaKnown RBP28.1■■■□□ 2.09
FANCA-221ENST00000566889 DNAJC7Q99615 494 aa28.1■■■□□ 2.09
FANCA-221ENST00000566889 HERVK_113P62684 666 aa28.1■■■□□ 2.09
FANCA-221ENST00000566889 TCP11X2Q5H9J9 407 aa28.1■■■□□ 2.09
FANCA-221ENST00000566889 SND1Q7KZF4 910 aaKnown RBP eCLIP28.1■■■□□ 2.09
FANCA-221ENST00000566889 GNL3LQ9NVN8 582 aaKnown RBP28.1■■■□□ 2.09
FANCA-221ENST00000566889 CHUKO15111 745 aa28.09■■■□□ 2.09
FANCA-221ENST00000566889 TMEM67Q5HYA8 995 aa28.09■■■□□ 2.09
FANCA-221ENST00000566889 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.09■■■□□ 2.092e-7■■■■□ 20.7
FANCA-221ENST00000566889 SENP2Q9HC62 589 aa28.09■■■□□ 2.09
FANCA-221ENST00000566889 SLC12A7Q9Y666 1083 aa28.09■■■□□ 2.09
FANCA-221ENST00000566889 CAMTA1Q9Y6Y1 1673 aa28.09■■■□□ 2.09
FANCA-221ENST00000566889 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.08■■■□□ 2.09
FANCA-221ENST00000566889 OSCARQ8IYS5 282 aa28.08■■■□□ 2.09
FANCA-221ENST00000566889 FNBP4Q8N3X1 1017 aaPredicted RBP28.08■■■□□ 2.09
FANCA-221ENST00000566889 ZNF572Q7Z3I7 529 aaPredicted RBP28.08■■■□□ 2.09
FANCA-221ENST00000566889 RUFY1Q96T51 708 aa28.08■■■□□ 2.09
FANCA-221ENST00000566889 DENND2AQ9ULE3 1009 aa28.08■■■□□ 2.09
FANCA-221ENST00000566889 LUC7L2Q9Y383 392 aaKnown RBP28.08■■■□□ 2.09
FANCA-221ENST00000566889 SAMM50Q9Y512 469 aa28.08■■■□□ 2.09
FANCA-221ENST00000566889 B4E1Z4 1266 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 KCNJ18B7U540 433 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 KCNJ12Q14500 433 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 EMBQ6PCB8 327 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 KIAA1328Q86T90 577 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 SMYD4Q8IYR2 804 aaPredicted RBP28.07■■■□□ 2.08
FANCA-221ENST00000566889 GIMAP7Q8NHV1 300 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 TAB2Q9NYJ8 693 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 KCNJ14Q9UNX9 436 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 A0A087X0B3 334 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 RDXP35241 583 aaKnown RBP28.07■■■□□ 2.08
FANCA-221ENST00000566889 EPHB4P54760 987 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 NEDD9Q14511 834 aa28.07■■■□□ 2.08
FANCA-221ENST00000566889 ZNF496Q96IT1 587 aaPredicted RBP28.07■■■□□ 2.08
FANCA-221ENST00000566889 JPH2Q9BR39 696 aaPredicted RBP28.07■■■□□ 2.08
FANCA-221ENST00000566889 UBXN1Q04323 297 aa28.06■■■□□ 2.08
FANCA-221ENST00000566889 PLCB4Q15147 1175 aa28.06■■■□□ 2.08
FANCA-221ENST00000566889 PHF8Q9UPP1 1060 aa28.06■■■□□ 2.08
FANCA-221ENST00000566889 A0A1W2PQC6 194 aa28.06■■■□□ 2.08
FANCA-221ENST00000566889 UBE2Q2LH0YL09 131 aa28.06■■■□□ 2.08
FANCA-221ENST00000566889 HSF2BPO75031 334 aa28.06■■■□□ 2.08
FANCA-221ENST00000566889 DEXIO95424 95 aa28.06■■■□□ 2.08
FANCA-221ENST00000566889 CYLC1P35663 651 aaPredicted RBP28.06■■■□□ 2.08
FANCA-221ENST00000566889 PAK1Q13153 545 aa28.06■■■□□ 2.08
FANCA-221ENST00000566889 ATRNO75882 1429 aa28.05■■■□□ 2.08
FANCA-221ENST00000566889 PDE2AO00408 941 aaPredicted RBP28.05■■■□□ 2.08
FANCA-221ENST00000566889 FERMT2Q96AC1 680 aa28.05■■■□□ 2.08
FANCA-221ENST00000566889 GGA2Q9UJY4 613 aa28.05■■■□□ 2.08
FANCA-221ENST00000566889 FBXO3Q9UK99 471 aa28.05■■■□□ 2.08
FANCA-221ENST00000566889 CAPN11Q9UMQ6 739 aa28.05■■■□□ 2.08
FANCA-221ENST00000566889 MYH7P12883 1935 aa28.05■■■□□ 2.08
FANCA-221ENST00000566889 TTC26A0AVF1 554 aa28.04■■■□□ 2.08
FANCA-221ENST00000566889 BMP15O95972 392 aa28.04■■■□□ 2.08
FANCA-221ENST00000566889 ZAP70P43403 619 aa28.04■■■□□ 2.08
FANCA-221ENST00000566889 HSP90AB3PQ58FF7 597 aa28.04■■■□□ 2.08
FANCA-221ENST00000566889 MYL10Q9BUA6 226 aa28.04■■■□□ 2.08
FANCA-221ENST00000566889 CWC25Q9NXE8 425 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms