RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 DYNLL2Q96FJ2 89 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 APBA2Q99767 749 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 HELLSQ9NRZ9 838 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 RBPJLQ9UBG7 517 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 ZNF236Q9UL36 1845 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 DOCK3Q8IZD9 2030 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 ECM2O94769 699 aaPredicted RBP19.95■□□□□ 0.78
USB1-211ENST00000565662 NT5C2P49902 561 aa19.95■□□□□ 0.78
USB1-211ENST00000565662 GPR142Q7Z601 462 aa19.95■□□□□ 0.78
USB1-211ENST00000565662 ZNF444Q8N0Y2 327 aaPredicted RBP19.95■□□□□ 0.78
USB1-211ENST00000565662 SHCBP1Q8NEM2 672 aa19.95■□□□□ 0.78
USB1-211ENST00000565662 SLC5A4Q9NY91 659 aa19.95■□□□□ 0.78
USB1-211ENST00000565662 PLIN4Q96Q06 1357 aa19.95■□□□□ 0.78
USB1-211ENST00000565662 SPDYE16A6NNV3 312 aaPredicted RBP19.94■□□□□ 0.78
USB1-211ENST00000565662 MINDY4BA8MYZ0 360 aa19.94■□□□□ 0.78
USB1-211ENST00000565662 STRNO43815 780 aa19.94■□□□□ 0.78
USB1-211ENST00000565662 EN2P19622 333 aaPredicted RBP19.94■□□□□ 0.78
USB1-211ENST00000565662 SLFNL1Q499Z3 407 aa19.94■□□□□ 0.78
USB1-211ENST00000565662 IFNL3Q8IZI9 196 aa19.94■□□□□ 0.78
USB1-211ENST00000565662 ANKLE1Q8NAG6 615 aa19.94■□□□□ 0.78
USB1-211ENST00000565662 HTATIP2Q9BUP3 242 aa19.94■□□□□ 0.78
USB1-211ENST00000565662 NYAP2Q9P242 653 aa19.94■□□□□ 0.78
USB1-211ENST00000565662 GJD2Q9UKL4 321 aa19.94■□□□□ 0.78
USB1-211ENST00000565662 SLC15A5A6NIM6 579 aa19.93■□□□□ 0.78
USB1-211ENST00000565662 ZKSCAN1P17029 563 aaPredicted RBP19.93■□□□□ 0.78
USB1-211ENST00000565662 OSBPL3Q9H4L5 887 aa19.93■□□□□ 0.78
USB1-211ENST00000565662 TXNRD2Q9NNW7 524 aa19.93■□□□□ 0.78
USB1-211ENST00000565662 HMX1Q9NP08 348 aaPredicted RBP19.93■□□□□ 0.78
USB1-211ENST00000565662 PAK6Q9NQU5 681 aaPredicted RBP19.93■□□□□ 0.78
USB1-211ENST00000565662 ZMYM6O95789 1325 aa19.93■□□□□ 0.78
USB1-211ENST00000565662 RPTORQ8N122 1335 aa19.93■□□□□ 0.78
USB1-211ENST00000565662 PLXNB2O15031 1838 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 A0A1W2PRG0 241 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 M0R2C6 588 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 HIP1O00291 1037 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 TNRC18O15417 2968 aaPredicted RBP19.92■□□□□ 0.78
USB1-211ENST00000565662 FLOT1O75955 427 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 SGPL1O95470 568 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 SLC25A27O95847 323 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 MTFR1Q15390 333 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 CHD1LQ86WJ1 897 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 U2AF1L4Q8WU68 220 aaKnown RBP19.92■□□□□ 0.78
USB1-211ENST00000565662 MROH8Q9H579 483 aa19.92■□□□□ 0.78
USB1-211ENST00000565662 PARP14Q460N5 1801 aa19.91■□□□□ 0.78
USB1-211ENST00000565662 CYP2D7A0A087X1C5 515 aa19.91■□□□□ 0.78
USB1-211ENST00000565662 CHGBP05060 677 aa19.91■□□□□ 0.78
USB1-211ENST00000565662 PCP11498 1178 aaKnown RBP19.91■□□□□ 0.78
USB1-211ENST00000565662 EEF2P13639 858 aaKnown RBP19.91■□□□□ 0.78
USB1-211ENST00000565662 ELNP15502 786 aa19.91■□□□□ 0.78
USB1-211ENST00000565662 RASA1P20936 1047 aa19.91■□□□□ 0.78
USB1-211ENST00000565662 DSG3P32926 999 aa19.91■□□□□ 0.78
USB1-211ENST00000565662 MAP2K5Q13163 448 aa19.91■□□□□ 0.78
USB1-211ENST00000565662 MORN1Q5T089 497 aa19.91■□□□□ 0.78
USB1-211ENST00000565662 ABRAQ8N0Z2 381 aa19.91■□□□□ 0.78
USB1-211ENST00000565662 OTUD7AQ8TE49 926 aaPredicted RBP19.91■□□□□ 0.78
USB1-211ENST00000565662 EPB41L4AQ9HCS5 686 aaPredicted RBP19.91■□□□□ 0.78
USB1-211ENST00000565662 MYH4Q9Y623 1939 aa19.9■□□□□ 0.78
USB1-211ENST00000565662 HOXC6P09630 235 aa19.9■□□□□ 0.78
USB1-211ENST00000565662 ATP2B2Q01814 1243 aa19.9■□□□□ 0.78
USB1-211ENST00000565662 NUCB1Q02818 461 aa19.9■□□□□ 0.78
USB1-211ENST00000565662 LNPKQ9C0E8 428 aa19.9■□□□□ 0.78
USB1-211ENST00000565662 SPATC1LQ9H0A9 340 aa19.9■□□□□ 0.78
USB1-211ENST00000565662 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.9■□□□□ 0.78
USB1-211ENST00000565662 MSCO60682 206 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 TTLL1O95922 423 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 MYCP01106 439 aaPredicted RBP19.89■□□□□ 0.77
USB1-211ENST00000565662 TSPY3P0CV98 308 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 TSPY8P0CW00 308 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 FDX1P10109 184 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 PPARAQ07869 468 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 RLFQ13129 1914 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 GRB14Q14449 540 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 ALX1Q15699 326 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 MCMDC2Q4G0Z9 681 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 WDR78Q5VTH9 848 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 MFSD14CQ5VZR4 134 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 USP6NLQ92738 828 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 UNC93B1Q9H1C4 597 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 PORCNQ9H237 461 aa19.89■□□□□ 0.77
USB1-211ENST00000565662 TRIM6-TRIM34B2RNG4 842 aa19.88■□□□□ 0.77
USB1-211ENST00000565662 CNMDO75829 334 aa19.88■□□□□ 0.77
USB1-211ENST00000565662 FARP2O94887 1054 aaPredicted RBP19.88■□□□□ 0.77
USB1-211ENST00000565662 CYP2B6P20813 491 aa19.88■□□□□ 0.77
USB1-211ENST00000565662 PTPREP23469 700 aa19.88■□□□□ 0.77
USB1-211ENST00000565662 EVX2Q03828 476 aa19.88■□□□□ 0.77
USB1-211ENST00000565662 Q3C1V9 767 aa19.88■□□□□ 0.77
USB1-211ENST00000565662 ANAPC4Q9UJX5 808 aa19.88■□□□□ 0.77
USB1-211ENST00000565662 BRCA2P51587 3418 aa19.88■□□□□ 0.77
USB1-211ENST00000565662 MAP3K21Q5TCX8 1036 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 GMCL1P1Q8NEA9 526 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 NEDD1Q8NHV4 660 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 EXOC6Q8TAG9 804 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 TRIB2Q92519 343 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 MKL1Q969V6 931 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 SHISA4Q96DD7 197 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 CRISPLD2Q9H0B8 497 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 BTBD7Q9P203 1132 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 PPP1R9AQ9ULJ8 1098 aa19.87■□□□□ 0.77
USB1-211ENST00000565662 IGKV6D-41A0A0C4DH26 115 aa19.86■□□□□ 0.77
USB1-211ENST00000565662 TFRCP02786 760 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms