RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 GRB14Q14449 540 aa10.38□□□□□ -0.75
CAPN3-213ENST00000565173 C20orf194Q5TEA3 1177 aa10.38□□□□□ -0.75
CAPN3-213ENST00000565173 C7orf61Q8IZ16 206 aa10.38□□□□□ -0.75
CAPN3-213ENST00000565173 ATP8A2Q9NTI2 1148 aa10.38□□□□□ -0.75
CAPN3-213ENST00000565173 RLFQ13129 1914 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 CYP2D7A0A087X1C5 515 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 MPHOSPH10O00566 681 aaKnown RBP10.37□□□□□ -0.75
CAPN3-213ENST00000565173 GLRX3O76003 335 aaKnown RBP10.37□□□□□ -0.75
CAPN3-213ENST00000565173 MBD4O95243 580 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 AKR1B1P15121 316 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 COG2Q14746 738 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 C12orf60Q5U649 245 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 TMEM179Q6ZVK1 233 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 NPLOC4Q8TAT6 608 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 BCL11AQ9H165 835 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 HOXC10Q9NYD6 342 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 SWAP70Q9UH65 585 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 RCAN3Q9UKA8 241 aa10.37□□□□□ -0.75
CAPN3-213ENST00000565173 ZMYND8Q9ULU4 1186 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-213ENST00000565173 USP17L12C9JPN9 530 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 USP17L21D6R901 530 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 SMARCA5O60264 1052 aaPredicted RBP10.36□□□□□ -0.75
CAPN3-213ENST00000565173 SYN1P17600 705 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 CYP2C19P33261 490 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 CDK8P49336 464 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 UBE3CQ15386 1083 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 LRRC26Q2I0M4 334 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 WDR78Q5VTH9 848 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 CLEC10AQ8IUN9 316 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 TRPV1Q8NER1 839 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 LRCH3Q96II8 777 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 MOV10L1Q9BXT6 1211 aaKnown RBP10.36□□□□□ -0.75
CAPN3-213ENST00000565173 SPATC1LQ9H0A9 340 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 PUS7LQ9H0K6 701 aaKnown RBP10.36□□□□□ -0.75
CAPN3-213ENST00000565173 TMX2Q9Y320 296 aa10.36□□□□□ -0.75
CAPN3-213ENST00000565173 STRNO43815 780 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 COBLO75128 1261 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 ERCC3P19447 782 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 ADORA2AP29274 412 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 DSG3P32926 999 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 MAGEA10P43363 369 aaPredicted RBP10.35□□□□□ -0.75
CAPN3-213ENST00000565173 ATP2B2Q01814 1243 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 MFSD14CQ5VZR4 134 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 CTR9Q6PD62 1173 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 C16orf86Q6ZW13 317 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 SPICE1Q8N0Z3 855 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 LPAR1Q92633 364 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 CCDC17Q96LX7 622 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.35□□□□□ -0.75
CAPN3-213ENST00000565173 LRRCC1Q9C099 1032 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 TANGO6Q9C0B7 1094 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.35□□□□□ -0.75
CAPN3-213ENST00000565173 CHMP4BQ9H444 224 aaKnown RBP10.35□□□□□ -0.75
CAPN3-213ENST00000565173 VCPKMTQ9H867 229 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 CWC22Q9HCG8 908 aaKnown RBP10.35□□□□□ -0.75
CAPN3-213ENST00000565173 DDX20Q9UHI6 824 aaKnown RBP10.35□□□□□ -0.75
CAPN3-213ENST00000565173 ADAMTS5Q9UNA0 930 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 IVNS1ABPQ9Y6Y0 642 aa10.35□□□□□ -0.75
CAPN3-213ENST00000565173 UNC80Q8N2C7 3258 aa10.34□□□□□ -0.75
CAPN3-213ENST00000565173 A0A0G2JMZ2 1700 aa10.34□□□□□ -0.75
CAPN3-213ENST00000565173 CYBAP13498 195 aa10.34□□□□□ -0.75
CAPN3-213ENST00000565173 EEF2P13639 858 aaKnown RBP10.34□□□□□ -0.75
CAPN3-213ENST00000565173 OLFML2BQ68BL8 750 aa10.34□□□□□ -0.75
CAPN3-213ENST00000565173 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
CAPN3-213ENST00000565173 SHCBP1Q8NEM2 672 aa10.34□□□□□ -0.75
CAPN3-213ENST00000565173 ATG4CQ96DT6 458 aa10.34□□□□□ -0.75
CAPN3-213ENST00000565173 STRBPQ96SI9 672 aaKnown RBP10.34□□□□□ -0.75
CAPN3-213ENST00000565173 SLC4A4Q9Y6R1 1079 aa10.34□□□□□ -0.75
CAPN3-213ENST00000565173 BAZ2AQ9UIF9 1905 aaKnown RBP10.34□□□□□ -0.75
CAPN3-213ENST00000565173 FRMPD3Q5JV73 1810 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 EYSQ5T1H1 3165 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 FLOT1O75955 427 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 ICA1Q05084 483 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 TMEM132BQ14DG7 1078 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 LRIT3Q3SXY7 679 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 DPP9Q86TI2 863 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 ABRAQ8N0Z2 381 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 MROH8Q9H579 483 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 KANSL2Q9H9L4 492 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 ARHGEF10LQ9HCE6 1279 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 ZNF236Q9UL36 1845 aa10.33□□□□□ -0.76
CAPN3-213ENST00000565173 GSG1L2A8MUP6 293 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 DNM1LO00429 736 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 WDR46O15213 610 aaKnown RBP10.32□□□□□ -0.76
CAPN3-213ENST00000565173 MSCO60682 206 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 CNGA1P29973 690 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 ZSCAN25Q6NSZ9 544 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 GPR153Q6NV75 609 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 TDHQ8IZJ6 230 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 OSBP2Q969R2 916 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 SENP6Q9GZR1 1112 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-213ENST00000565173 DCTPP1Q9H773 170 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 ECHDC1Q9NTX5 307 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 FBXO28Q9NVF7 368 aa10.32□□□□□ -0.76
CAPN3-213ENST00000565173 PARP14Q460N5 1801 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 RASA1P20936 1047 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 PLS1Q14651 629 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 SBK1Q52WX2 424 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 PRAMEF19Q5SWL8 479 aa10.31□□□□□ -0.76
CAPN3-213ENST00000565173 TSHZ3Q63HK5 1081 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms