RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 ARNTP27540 789 aa6.26□□□□□ -1.41
CDR2-203ENST00000563573 DSC3Q14574 896 aa6.26□□□□□ -1.41
CDR2-203ENST00000563573 CBLL1Q75N03 491 aa6.26□□□□□ -1.41
CDR2-203ENST00000563573 FBF1Q8TES7 1133 aa6.26□□□□□ -1.41
CDR2-203ENST00000563573 KCNB2Q92953 911 aa6.26□□□□□ -1.41
CDR2-203ENST00000563573 ZC3H12CQ9C0D7 883 aaKnown RBP6.26□□□□□ -1.41
CDR2-203ENST00000563573 DISC1Q9NRI5 854 aa6.26□□□□□ -1.41
CDR2-203ENST00000563573 AKAP2Q9Y2D5 859 aa6.26□□□□□ -1.41
CDR2-203ENST00000563573 TECPR2O15040 1411 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 PTPRUQ92729 1446 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 BTBD11A6QL63 1104 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 GIPC1O14908 333 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 DYNC1LI2O43237 492 aaPredicted RBP6.25□□□□□ -1.41
CDR2-203ENST00000563573 TREHO43280 583 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 RNGTTO60942 597 aaKnown RBP6.25□□□□□ -1.41
CDR2-203ENST00000563573 NME2P22392 152 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 MAPK1P28482 360 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 ENOX2Q16206 610 aaKnown RBP6.25□□□□□ -1.41
CDR2-203ENST00000563573 SULF2Q8IWU5 870 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 ZSCAN29Q8IWY8 852 aaPredicted RBP6.25□□□□□ -1.41
CDR2-203ENST00000563573 WDR89Q96FK6 387 aaPredicted RBP6.25□□□□□ -1.41
CDR2-203ENST00000563573 CEP44Q9C0F1 390 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 PANK3Q9H999 370 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 MKNK2Q9HBH9 465 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 PAK6Q9NQU5 681 aaPredicted RBP6.25□□□□□ -1.41
CDR2-203ENST00000563573 DISP3Q9P2K9 1392 aa6.25□□□□□ -1.41
CDR2-203ENST00000563573 ROBO2Q9HCK4 1378 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 PNMA6FA0A0J9YX94 578 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 FAM87AP0C7U9 286 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 GSTT1P30711 240 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 ERVK-24P63145 666 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.24□□□□□ -1.41
CDR2-203ENST00000563573 SCARA3Q6AZY7 606 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 HDGFL2Q7Z4V5 671 aaPredicted RBP6.24□□□□□ -1.41
CDR2-203ENST00000563573 PDZD3Q86UT5 571 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 NETO1Q8TDF5 533 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 LGR6Q9HBX8 967 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 SSU72Q9NP77 194 aaKnown RBP6.24□□□□□ -1.41
CDR2-203ENST00000563573 TERF2IPQ9NYB0 399 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 PPM1HQ9ULR3 514 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 KNSTRNQ9Y448 316 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 PCDHGC5Q9Y5F6 944 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 XRN1Q8IZH2 1706 aaKnown RBP6.24□□□□□ -1.41
CDR2-203ENST00000563573 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.24□□□□□ -1.41
CDR2-203ENST00000563573 PTCH1Q13635 1447 aa6.24□□□□□ -1.41
CDR2-203ENST00000563573 PLEKHH1Q9ULM0 1364 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 NINLQ9Y2I6 1382 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 BIN1O00499 593 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 TTLL4Q14679 1199 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 ZC3H12AQ5D1E8 599 aaKnown RBP6.23□□□□□ -1.41
CDR2-203ENST00000563573 NXPE4Q6UWF7 544 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 NFXL1Q6ZNB6 911 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 ARHGAP27Q6ZUM4 889 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 RNF214Q8ND24 703 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 BCL7CQ8WUZ0 217 aaPredicted RBP6.23□□□□□ -1.41
CDR2-203ENST00000563573 VAV3Q9UKW4 847 aa6.23□□□□□ -1.41
CDR2-203ENST00000563573 ITGB5P18084 799 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 CDK5R2Q13319 367 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 LRRC14Q15048 493 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 ALG1LQ6GMV1 187 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 PI16Q6UXB8 463 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.22□□□□□ -1.41
CDR2-203ENST00000563573 TRAIPQ9BWF2 469 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 SLC12A5Q9H2X9 1139 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 C19orf44Q9H6X5 657 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 NCOA3Q9Y6Q9 1424 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 ITSN1Q15811 1721 aa6.22□□□□□ -1.41
CDR2-203ENST00000563573 RGPD8O14715 1765 aaPredicted RBP6.21□□□□□ -1.41
CDR2-203ENST00000563573 TULP4Q9NRJ4 1543 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 HCLS1P14317 486 aaPredicted RBP6.21□□□□□ -1.42
CDR2-203ENST00000563573 ATF3P18847 181 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 PRKCQQ04759 706 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 ZNF252P-AS1Q0IIN9 211 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 CNGB1Q14028 1251 aaPredicted RBP6.21□□□□□ -1.42
CDR2-203ENST00000563573 PLCL1Q15111 1095 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 MAP1SQ66K74 1059 aaPredicted RBP6.21□□□□□ -1.42
CDR2-203ENST00000563573 HOMEZQ8IX15 550 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 ANKRD24Q8TF21 1146 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 ACSBG1Q96GR2 724 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 NECAB3Q96P71 396 aaPredicted RBP6.21□□□□□ -1.42
CDR2-203ENST00000563573 CBX8Q9HC52 389 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 ADGRB2O60241 1585 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 NWD1Q149M9 1564 aa6.21□□□□□ -1.42
CDR2-203ENST00000563573 NKTRP30414 1462 aaKnown RBP6.21□□□□□ -1.42
CDR2-203ENST00000563573 MYOM1P52179 1685 aa6.2□□□□□ -1.42
CDR2-203ENST00000563573 KTN1Q86UP2 1357 aaKnown RBP6.2□□□□□ -1.42
CDR2-203ENST00000563573 TMEM265A0A087WTH1 108 aa6.2□□□□□ -1.42
CDR2-203ENST00000563573 TRIM37O94972 964 aa6.2□□□□□ -1.42
CDR2-203ENST00000563573 ATP2B2Q01814 1243 aa6.2□□□□□ -1.42
CDR2-203ENST00000563573 RALBP1Q15311 655 aa6.2□□□□□ -1.42
CDR2-203ENST00000563573 IFI16Q16666 785 aaKnown RBP6.2□□□□□ -1.42
CDR2-203ENST00000563573 NGDNQ8NEJ9 315 aaKnown RBP6.2□□□□□ -1.42
CDR2-203ENST00000563573 DUSP23Q9BVJ7 150 aa6.2□□□□□ -1.42
CDR2-203ENST00000563573 CACNA2D2Q9NY47 1150 aa6.2□□□□□ -1.42
CDR2-203ENST00000563573 STRCP1A6NGW2 1772 aa6.2□□□□□ -1.42
CDR2-203ENST00000563573 MSH6P52701 1360 aa6.19□□□□□ -1.42
CDR2-203ENST00000563573 ANKRD36BQ8N2N9 1353 aa6.19□□□□□ -1.42
CDR2-203ENST00000563573 NALCNQ8IZF0 1738 aa6.19□□□□□ -1.42
CDR2-203ENST00000563573 FMN2Q9NZ56 1722 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms