RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 KIAA1755Q5JYT7 1200 aa18.99■□□□□ 0.63
CLK3-211ENST00000563297 C12orf60Q5U649 245 aa18.99■□□□□ 0.63
CLK3-211ENST00000563297 WDR78Q5VTH9 848 aa18.99■□□□□ 0.63
CLK3-211ENST00000563297 LHX8Q68G74 356 aa18.99■□□□□ 0.63
CLK3-211ENST00000563297 C11orf49Q9H6J7 331 aa18.99■□□□□ 0.63
CLK3-211ENST00000563297 STAP2Q9UGK3 403 aa18.99■□□□□ 0.63
CLK3-211ENST00000563297 CYP2D7A0A087X1C5 515 aa18.98■□□□□ 0.63
CLK3-211ENST00000563297 USP17L12C9JPN9 530 aa18.98■□□□□ 0.63
CLK3-211ENST00000563297 USP17L21D6R901 530 aa18.98■□□□□ 0.63
CLK3-211ENST00000563297 AKR1B1P15121 316 aa18.98■□□□□ 0.63
CLK3-211ENST00000563297 FLRT1Q9NZU1 646 aa18.98■□□□□ 0.63
CLK3-211ENST00000563297 HOXC6P09630 235 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 CDK8P49336 464 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 GRB14Q14449 540 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 C7orf61Q8IZ16 206 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 NPLOC4Q8TAT6 608 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 CCDC17Q96LX7 622 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 PUS7LQ9H0K6 701 aaKnown RBP18.97■□□□□ 0.63
CLK3-211ENST00000563297 TMX2Q9Y320 296 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 IVNS1ABPQ9Y6Y0 642 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 MYH7P12883 1935 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 MYH8P13535 1937 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 RLFQ13129 1914 aa18.97■□□□□ 0.63
CLK3-211ENST00000563297 A0A1W2PPC1 479 aa18.96■□□□□ 0.63
CLK3-211ENST00000563297 MFSD14CQ5VZR4 134 aa18.96■□□□□ 0.63
CLK3-211ENST00000563297 CLEC10AQ8IUN9 316 aa18.96■□□□□ 0.63
CLK3-211ENST00000563297 MOV10L1Q9BXT6 1211 aaKnown RBP18.96■□□□□ 0.63
CLK3-211ENST00000563297 TANGO6Q9C0B7 1094 aa18.96■□□□□ 0.63
CLK3-211ENST00000563297 SLC4A4Q9Y6R1 1079 aa18.96■□□□□ 0.63
CLK3-211ENST00000563297 PFASO15067 1338 aa18.96■□□□□ 0.63
CLK3-211ENST00000563297 COL6A1P12109 1028 aa18.95■□□□□ 0.62
CLK3-211ENST00000563297 DSG3P32926 999 aa18.95■□□□□ 0.62
CLK3-211ENST00000563297 ATP2B2Q01814 1243 aa18.95■□□□□ 0.62
CLK3-211ENST00000563297 ZSCAN25Q6NSZ9 544 aa18.95■□□□□ 0.62
CLK3-211ENST00000563297 CTR9Q6PD62 1173 aa18.95■□□□□ 0.62
CLK3-211ENST00000563297 C16orf86Q6ZW13 317 aa18.95■□□□□ 0.62
CLK3-211ENST00000563297 GDF15Q99988 308 aa18.95■□□□□ 0.62
CLK3-211ENST00000563297 ARHGEF10LQ9HCE6 1279 aa18.95■□□□□ 0.62
CLK3-211ENST00000563297 ZMYND8Q9ULU4 1186 aaPredicted RBP18.95■□□□□ 0.62
CLK3-211ENST00000563297 STRNO43815 780 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 IGHA2P01877 340 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 ICA1Q05084 483 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 AMOTL1Q8IY63 956 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 SPICE1Q8N0Z3 855 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 LPAR1Q92633 364 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 DDRGK1Q96HY6 314 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 SPATC1LQ9H0A9 340 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 DCTPP1Q9H773 170 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 VCPKMTQ9H867 229 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 ECHDC1Q9NTX5 307 aa18.94■□□□□ 0.62
CLK3-211ENST00000563297 CYP2C19P33261 490 aa18.93■□□□□ 0.62
CLK3-211ENST00000563297 BMP8BP34820 402 aa18.93■□□□□ 0.62
CLK3-211ENST00000563297 MB21D1Q8N884 522 aa18.93■□□□□ 0.62
CLK3-211ENST00000563297 SHCBP1Q8NEM2 672 aa18.93■□□□□ 0.62
CLK3-211ENST00000563297 FLOT1O75955 427 aa18.92■□□□□ 0.62
CLK3-211ENST00000563297 EEF2P13639 858 aaKnown RBP18.92■□□□□ 0.62
CLK3-211ENST00000563297 SYN1P17600 705 aa18.92■□□□□ 0.62
CLK3-211ENST00000563297 ERCC3P19447 782 aa18.92■□□□□ 0.62
CLK3-211ENST00000563297 ADORA2AP29274 412 aa18.92■□□□□ 0.62
CLK3-211ENST00000563297 DPP9Q86TI2 863 aa18.92■□□□□ 0.62
CLK3-211ENST00000563297 ATG4CQ96DT6 458 aa18.92■□□□□ 0.62
CLK3-211ENST00000563297 STRBPQ96SI9 672 aaKnown RBP18.92■□□□□ 0.62
CLK3-211ENST00000563297 SH2D4AQ9H788 454 aa18.92■□□□□ 0.62
CLK3-211ENST00000563297 ZNFX1Q9P2E3 1918 aaKnown RBP18.92■□□□□ 0.62
CLK3-211ENST00000563297 WDR46O15213 610 aaKnown RBP18.91■□□□□ 0.62
CLK3-211ENST00000563297 CNGA1P29973 690 aa18.91■□□□□ 0.62
CLK3-211ENST00000563297 KBTBD3Q8NAB2 608 aa18.91■□□□□ 0.62
CLK3-211ENST00000563297 TRPV1Q8NER1 839 aa18.91■□□□□ 0.62
CLK3-211ENST00000563297 KANSL2Q9H9L4 492 aa18.91■□□□□ 0.62
CLK3-211ENST00000563297 DDX20Q9UHI6 824 aaKnown RBP18.91■□□□□ 0.62
CLK3-211ENST00000563297 GSG1L2A8MUP6 293 aa18.9■□□□□ 0.62
CLK3-211ENST00000563297 SOX1O00570 391 aaPredicted RBP18.9■□□□□ 0.62
CLK3-211ENST00000563297 COBLO75128 1261 aa18.9■□□□□ 0.62
CLK3-211ENST00000563297 PLS1Q14651 629 aa18.9■□□□□ 0.62
CLK3-211ENST00000563297 LRRC26Q2I0M4 334 aa18.9■□□□□ 0.62
CLK3-211ENST00000563297 SBK1Q52WX2 424 aa18.9■□□□□ 0.62
CLK3-211ENST00000563297 OLFML2BQ68BL8 750 aa18.9■□□□□ 0.62
CLK3-211ENST00000563297 OSBP2Q969R2 916 aa18.9■□□□□ 0.62
CLK3-211ENST00000563297 MROH8Q9H579 483 aa18.9■□□□□ 0.62
CLK3-211ENST00000563297 ADAMTS5Q9UNA0 930 aa18.9■□□□□ 0.62
CLK3-211ENST00000563297 FRMPD3Q5JV73 1810 aa18.89■□□□□ 0.61
CLK3-211ENST00000563297 MSCO60682 206 aa18.89■□□□□ 0.61
CLK3-211ENST00000563297 TMEM132BQ14DG7 1078 aa18.89■□□□□ 0.61
CLK3-211ENST00000563297 SAMD1Q6SPF0 538 aaPredicted RBP18.89■□□□□ 0.61
CLK3-211ENST00000563297 NCAPG2Q86XI2 1143 aa18.89■□□□□ 0.61
CLK3-211ENST00000563297 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLK3-211ENST00000563297 FBXO28Q9NVF7 368 aa18.89■□□□□ 0.61
CLK3-211ENST00000563297 ARPP21Q9UBL0 812 aaPredicted RBP18.89■□□□□ 0.61
CLK3-211ENST00000563297 DNAH12Q6ZR08 3092 aa18.89■□□□□ 0.61
CLK3-211ENST00000563297 A0A0G2JMZ2 1700 aa18.88■□□□□ 0.61
CLK3-211ENST00000563297 PARP14Q460N5 1801 aa18.88■□□□□ 0.61
CLK3-211ENST00000563297 LAMA3Q16787 3333 aa18.88■□□□□ 0.61
CLK3-211ENST00000563297 CYBAP13498 195 aa18.88■□□□□ 0.61
CLK3-211ENST00000563297 MAGEA10P43363 369 aaPredicted RBP18.88■□□□□ 0.61
CLK3-211ENST00000563297 TSHZ3Q63HK5 1081 aa18.88■□□□□ 0.61
CLK3-211ENST00000563297 GIMAP6Q6P9H5 292 aa18.88■□□□□ 0.61
CLK3-211ENST00000563297 ABRAQ8N0Z2 381 aa18.88■□□□□ 0.61
CLK3-211ENST00000563297 LRCH3Q96II8 777 aa18.88■□□□□ 0.61
CLK3-211ENST00000563297 SENP6Q9GZR1 1112 aaPredicted RBP18.88■□□□□ 0.61
CLK3-211ENST00000563297 SMCHD1A6NHR9 2005 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms