RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 TANGO6Q9C0B7 1094 aa22.5■■□□□ 1.19
KATNB1-202ENST00000562542 COBLO75128 1261 aa22.49■■□□□ 1.19
KATNB1-202ENST00000562542 ERCC3P19447 782 aa22.49■■□□□ 1.19
KATNB1-202ENST00000562542 PLS1Q14651 629 aa22.49■■□□□ 1.19
KATNB1-202ENST00000562542 SPATC1LQ9H0A9 340 aa22.49■■□□□ 1.19
KATNB1-202ENST00000562542 ZNF576Q9H609 170 aa22.49■■□□□ 1.19
KATNB1-202ENST00000562542 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.48■■□□□ 1.19
KATNB1-202ENST00000562542 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.48■■□□□ 1.19
KATNB1-202ENST00000562542 COG2Q14746 738 aa22.48■■□□□ 1.19
KATNB1-202ENST00000562542 MIGA1Q8NAN2 632 aa22.48■■□□□ 1.19
KATNB1-202ENST00000562542 TIFAQ96CG3 184 aa22.48■■□□□ 1.19
KATNB1-202ENST00000562542 XPNPEP3Q9NQH7 507 aa22.48■■□□□ 1.19
KATNB1-202ENST00000562542 TMEM39AQ9NV64 488 aa22.48■■□□□ 1.19
KATNB1-202ENST00000562542 HOXC10Q9NYD6 342 aa22.48■■□□□ 1.19
KATNB1-202ENST00000562542 PHF24Q9UPV7 400 aa22.48■■□□□ 1.19
KATNB1-202ENST00000562542 ZNF236Q9UL36 1845 aa22.47■■□□□ 1.19
KATNB1-202ENST00000562542 RARBP10826 455 aa22.47■■□□□ 1.19
KATNB1-202ENST00000562542 TTC6Q86TZ1 520 aa22.47■■□□□ 1.19
KATNB1-202ENST00000562542 NCAPG2Q86XI2 1143 aa22.47■■□□□ 1.19
KATNB1-202ENST00000562542 SHCBP1Q8NEM2 672 aa22.47■■□□□ 1.19
KATNB1-202ENST00000562542 GAS2L1Q99501 681 aaPredicted RBP22.47■■□□□ 1.19
KATNB1-202ENST00000562542 EHD4Q9H223 541 aa22.47■■□□□ 1.19
KATNB1-202ENST00000562542 MUC3AQ02505 3323 aa22.47■■□□□ 1.19
KATNB1-202ENST00000562542 KIAA0355O15063 1070 aa22.46■■□□□ 1.19
KATNB1-202ENST00000562542 ZAP70P43403 619 aa22.46■■□□□ 1.19
KATNB1-202ENST00000562542 RNF180Q86T96 592 aa22.46■■□□□ 1.19
KATNB1-202ENST00000562542 DBNDD2Q9BQY9 259 aa22.46■■□□□ 1.19
KATNB1-202ENST00000562542 PIH1D3Q9NQM4 214 aaKnown RBP22.46■■□□□ 1.19
KATNB1-202ENST00000562542 IDH1O75874 414 aaKnown RBP22.45■■□□□ 1.18
KATNB1-202ENST00000562542 OS9Q13438 667 aaPredicted RBP22.45■■□□□ 1.18
KATNB1-202ENST00000562542 CERS3Q8IU89 383 aa22.45■■□□□ 1.18
KATNB1-202ENST00000562542 CDCA7LQ96GN5 454 aa22.45■■□□□ 1.18
KATNB1-202ENST00000562542 MAML3Q96JK9 1138 aa22.45■■□□□ 1.18
KATNB1-202ENST00000562542 MROH8Q9H579 483 aa22.45■■□□□ 1.18
KATNB1-202ENST00000562542 MYH1P12882 1939 aa22.45■■□□□ 1.18
KATNB1-202ENST00000562542 PNMA6EA0A0J9YXQ4 647 aa22.44■■□□□ 1.18
KATNB1-202ENST00000562542 MPHOSPH10O00566 681 aaKnown RBP22.44■■□□□ 1.18
KATNB1-202ENST00000562542 PGK1P00558 417 aa22.44■■□□□ 1.18
KATNB1-202ENST00000562542 GNAI2P04899 355 aa22.44■■□□□ 1.18
KATNB1-202ENST00000562542 SEPT2Q15019 361 aa22.44■■□□□ 1.18
KATNB1-202ENST00000562542 TNNI3KQ59H18 835 aa22.44■■□□□ 1.18
KATNB1-202ENST00000562542 SAMD1Q6SPF0 538 aaPredicted RBP22.44■■□□□ 1.18
KATNB1-202ENST00000562542 IL27Q8NEV9 243 aa22.44■■□□□ 1.18
KATNB1-202ENST00000562542 ATXN2LQ8WWM7 1075 aaKnown RBP22.44■■□□□ 1.18
KATNB1-202ENST00000562542 THEGQ9P2T0 379 aa22.44■■□□□ 1.18
KATNB1-202ENST00000562542 FPGT-TNNI3KV9GXZ4 949 aa22.44■■□□□ 1.18
KATNB1-202ENST00000562542 A0A1W2PQ45 241 aaPredicted RBP22.43■■□□□ 1.18
KATNB1-202ENST00000562542 A0A1W2PQY0 241 aa22.43■■□□□ 1.18
KATNB1-202ENST00000562542 IGSF3O75054 1194 aa22.43■■□□□ 1.18
KATNB1-202ENST00000562542 FCER1AP12319 257 aa22.43■■□□□ 1.18
KATNB1-202ENST00000562542 SHMT1P34896 483 aa22.43■■□□□ 1.18
KATNB1-202ENST00000562542 CCDC129Q6ZRS4 1044 aa22.43■■□□□ 1.18
KATNB1-202ENST00000562542 ABRAQ8N0Z2 381 aa22.43■■□□□ 1.18
KATNB1-202ENST00000562542 MB21D1Q8N884 522 aa22.43■■□□□ 1.18
KATNB1-202ENST00000562542 ADAMTS19Q8TE59 1207 aa22.43■■□□□ 1.18
KATNB1-202ENST00000562542 FAM122AQ96E09 287 aa22.43■■□□□ 1.18
KATNB1-202ENST00000562542 DCDC2CA8MYV0 355 aa22.42■■□□□ 1.18
KATNB1-202ENST00000562542 GUCY1A2P33402 732 aa22.42■■□□□ 1.18
KATNB1-202ENST00000562542 PLA2G5P39877 138 aa22.42■■□□□ 1.18
KATNB1-202ENST00000562542 MAGEB6Q8N7X4 407 aa22.42■■□□□ 1.18
KATNB1-202ENST00000562542 SLC44A5Q8NCS7 719 aa22.42■■□□□ 1.18
KATNB1-202ENST00000562542 ASB2Q96Q27 587 aa22.42■■□□□ 1.18
KATNB1-202ENST00000562542 POLR3DP05423 398 aaPredicted RBP22.41■■□□□ 1.18
KATNB1-202ENST00000562542 CT47B1P0C2W7 299 aaPredicted RBP22.41■■□□□ 1.18
KATNB1-202ENST00000562542 PRDM12Q9H4Q4 367 aa22.41■■□□□ 1.18
KATNB1-202ENST00000562542 GPR108Q9NPR9 543 aa22.41■■□□□ 1.18
KATNB1-202ENST00000562542 NRBP1Q9UHY1 535 aa22.41■■□□□ 1.18
KATNB1-202ENST00000562542 A0A1W2PRG0 241 aa22.4■■□□□ 1.18
KATNB1-202ENST00000562542 FLOT1O75955 427 aa22.4■■□□□ 1.18
KATNB1-202ENST00000562542 PLCD1P51178 756 aa22.4■■□□□ 1.18
KATNB1-202ENST00000562542 UHRF1Q96T88 793 aaPredicted RBP22.4■■□□□ 1.18
KATNB1-202ENST00000562542 STARD7Q9NQZ5 370 aa22.4■■□□□ 1.18
KATNB1-202ENST00000562542 MYO5AQ9Y4I1 1855 aaKnown RBP22.39■■□□□ 1.18
KATNB1-202ENST00000562542 DSG3P32926 999 aa22.39■■□□□ 1.17
KATNB1-202ENST00000562542 MRPS5P82675 430 aaKnown RBP22.39■■□□□ 1.17
KATNB1-202ENST00000562542 FAAP100Q0VG06 881 aa22.39■■□□□ 1.17
KATNB1-202ENST00000562542 CCDC85BQ15834 202 aaPredicted RBP22.39■■□□□ 1.17
KATNB1-202ENST00000562542 AKNAD1Q5T1N1 836 aa22.39■■□□□ 1.17
KATNB1-202ENST00000562542 CCDC174Q6PII3 467 aa22.39■■□□□ 1.17
KATNB1-202ENST00000562542 ATG4CQ96DT6 458 aa22.39■■□□□ 1.17
KATNB1-202ENST00000562542 ZNF512BQ96KM6 892 aaPredicted RBP22.39■■□□□ 1.17
KATNB1-202ENST00000562542 MMP19Q99542 508 aa22.39■■□□□ 1.17
KATNB1-202ENST00000562542 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.39■■□□□ 1.177e-8■□□□□ 9.4
KATNB1-202ENST00000562542 TIMP1P01033 207 aa22.38■■□□□ 1.17
KATNB1-202ENST00000562542 PBX2P40425 430 aa22.38■■□□□ 1.17
KATNB1-202ENST00000562542 ANKRD33Q7Z3H0 272 aa22.38■■□□□ 1.17
KATNB1-202ENST00000562542 NUP133Q8WUM0 1156 aa22.38■■□□□ 1.17
KATNB1-202ENST00000562542 LENG1Q96BZ8 264 aaPredicted RBP22.38■■□□□ 1.17
KATNB1-202ENST00000562542 A0A0G2JMZ2 1700 aa22.37■■□□□ 1.17
KATNB1-202ENST00000562542 PGK2P07205 417 aa22.37■■□□□ 1.17
KATNB1-202ENST00000562542 AKR1A1P14550 325 aa22.37■■□□□ 1.17
KATNB1-202ENST00000562542 TAL1P17542 331 aaPredicted RBP22.37■■□□□ 1.17
KATNB1-202ENST00000562542 IGFBP4P22692 258 aa22.37■■□□□ 1.17
KATNB1-202ENST00000562542 SPICE1Q8N0Z3 855 aa22.37■■□□□ 1.17
KATNB1-202ENST00000562542 ARHGAP45Q92619 1136 aa22.37■■□□□ 1.17
KATNB1-202ENST00000562542 TOX2Q96NM4 488 aa22.37■■□□□ 1.17
KATNB1-202ENST00000562542 TINF2Q9BSI4 451 aa22.37■■□□□ 1.17
KATNB1-202ENST00000562542 PBX4Q9BYU1 374 aa22.37■■□□□ 1.17
KATNB1-202ENST00000562542 GRXCR1A8MXD5 290 aa22.36■■□□□ 1.17
KATNB1-202ENST00000562542 SLC25A27O95847 323 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms