RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 MAST1Q9Y2H9 1570 aa6.39□□□□□ -1.39
CAPN3-211ENST00000562199 CCDC196A0A1B0GTZ2 297 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 IQCA1LA6NCM1 817 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 BACH1O14867 736 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 ARAFP10398 606 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 EPXP11678 715 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 NCAM1P13591 858 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 HOXB4P17483 251 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-211ENST00000562199 KIF5BP33176 963 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 TXLNAP40222 546 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 MECOMQ03112 1051 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 SFSWAPQ12872 951 aaKnown RBP6.38□□□□□ -1.39
CAPN3-211ENST00000562199 TRDNQ13061 729 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 MTFR1Q15390 333 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 NFE2Q16621 373 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-211ENST00000562199 MYOCDQ8IZQ8 938 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 ZNF295-AS1Q8N0V1 137 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 PPHLN1Q8NEY8 458 aaKnown RBP6.38□□□□□ -1.39
CAPN3-211ENST00000562199 SRRTQ9BXP5 876 aaKnown RBP6.38□□□□□ -1.39
CAPN3-211ENST00000562199 DIAPH3Q9NSV4 1193 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 ZNF358Q9NW07 568 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 PARP2Q9UGN5 583 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 KDM2BQ8NHM5 1336 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 SYNJ2O15056 1496 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 FAM135AQ9P2D6 1515 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 ABCA8O94911 1581 aa6.38□□□□□ -1.39
CAPN3-211ENST00000562199 MYO5CQ9NQX4 1742 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 PREX2Q70Z35 1606 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 CCDC141Q6ZP82 1450 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 EIF3AQ14152 1382 aaKnown RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 PIK3R4Q99570 1358 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 H0YHG0 523 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 KIAA0754O94854 1291 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 GYS1P13807 737 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 IDEP14735 1019 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 SEC13P55735 322 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 PCBP4P57723 403 aaKnown RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 SESN3P58005 492 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 COX10Q12887 443 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 GNL2Q13823 731 aaKnown RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 SLMAPQ14BN4 828 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 PTPN14Q15678 1187 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 SEPT7Q16181 437 aaKnown RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 ZSCAN26Q16670 478 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 ERAP2Q6P179 960 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 ZNF449Q6P9G9 518 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 MCM10Q7L590 875 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 TNS4Q8IZW8 715 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 SKA1Q96BD8 255 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 ZBTB10Q96DT7 871 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 GPR101Q96P66 508 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 GSDMAQ96QA5 445 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 FEZ1Q99689 392 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 NGRNQ9NPE2 291 aaKnown RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 SH3GLB2Q9NR46 395 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 C6orf203Q9P0P8 240 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 ZMAT5Q9UDW3 170 aaKnown RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 CFDP1Q9UEE9 299 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 PCSK1NQ9UHG2 260 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 TAGLN3Q9UI15 199 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 DDX41Q9UJV9 622 aaKnown RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 RRP15Q9Y3B9 282 aaKnown RBP6.37□□□□□ -1.39
CAPN3-211ENST00000562199 N6AMT1Q9Y5N5 214 aa6.37□□□□□ -1.39
CAPN3-211ENST00000562199 IQGAP3Q86VI3 1631 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 SYNMO15061 1565 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 A2MP01023 1474 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 NUP155O75694 1391 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 TMCO5BA8MYB1 307 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 hCG_1984214I3L0E3 225 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 ADAM23O75077 832 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 E2F6O75461 281 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 MMEP08473 750 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 ALDH1B1P30837 517 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 HOXA10P31260 410 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-211ENST00000562199 ARID5AQ03989 594 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 TMEM164Q5U3C3 297 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 CHSY3Q70JA7 882 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 CENPQQ7L2Z9 268 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-211ENST00000562199 RASSF3Q86WH2 238 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 NKAIN3Q8N8D7 197 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 FLCNQ8NFG4 579 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 ZDHHC1Q8WTX9 485 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 SH3KBP1Q96B97 665 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 CRBNQ96SW2 442 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 NELL2Q99435 816 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 SELENOOQ9BVL4 669 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 RBSNQ9H1K0 784 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 VPS33BQ9H267 617 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 C12orf49Q9H741 205 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 TRPV5Q9NQA5 729 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 STRN4Q9NRL3 753 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 ZDHHC3Q9NYG2 299 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 SCHIP1Q9P0W5 487 aaPredicted RBP6.36□□□□□ -1.39
CAPN3-211ENST00000562199 LUZP4Q9P127 313 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 SEL1LQ9UBV2 794 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 TPCN1Q9ULQ1 816 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 GTF2A1LQ9UNN4 478 aa6.36□□□□□ -1.39
CAPN3-211ENST00000562199 PLXNC1O60486 1568 aa6.35□□□□□ -1.39
CAPN3-211ENST00000562199 ABCC2Q92887 1545 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms