RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 LRRC4CQ9HCJ2 640 aa8.65□□□□□ -1.02
DENND4A-204ENST00000562028 USP35Q9P2H5 1018 aa8.65□□□□□ -1.02
DENND4A-204ENST00000562028 CBX7O95931 251 aa8.64□□□□□ -1.03
DENND4A-204ENST00000562028 TGFB1P01137 390 aa8.64□□□□□ -1.03
DENND4A-204ENST00000562028 ITGB7P26010 798 aa8.64□□□□□ -1.03
DENND4A-204ENST00000562028 MFSD4AQ8N468 514 aa8.64□□□□□ -1.03
DENND4A-204ENST00000562028 PIWIL2Q8TC59 973 aaKnown RBP8.64□□□□□ -1.03
DENND4A-204ENST00000562028 KCNH3Q9ULD8 1083 aa8.64□□□□□ -1.03
DENND4A-204ENST00000562028 RNF112Q9ULX5 631 aa8.64□□□□□ -1.03
DENND4A-204ENST00000562028 PRR33A8MZF0 331 aa8.63□□□□□ -1.03
DENND4A-204ENST00000562028 SLC7A5Q01650 507 aa8.63□□□□□ -1.03
DENND4A-204ENST00000562028 GNPTABQ3T906 1256 aa8.63□□□□□ -1.03
DENND4A-204ENST00000562028 LARP1BQ659C4 914 aaKnown RBP8.63□□□□□ -1.03
DENND4A-204ENST00000562028 INTS5Q6P9B9 1019 aaKnown RBP8.63□□□□□ -1.03
DENND4A-204ENST00000562028 FAM181AQ8N9Y4 354 aa8.63□□□□□ -1.03
DENND4A-204ENST00000562028 Q96M66 194 aa8.63□□□□□ -1.03
DENND4A-204ENST00000562028 DNAJC2Q99543 621 aaKnown RBP8.63□□□□□ -1.03
DENND4A-204ENST00000562028 TRIM55Q9BYV6 548 aa8.63□□□□□ -1.03
DENND4A-204ENST00000562028 CAPN6Q9Y6Q1 641 aa8.63□□□□□ -1.03
DENND4A-204ENST00000562028 U3KQE9 123 aa8.63□□□□□ -1.03
DENND4A-204ENST00000562028 C9IYK1 514 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 ADAM23O75077 832 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 CEACAM5P06731 702 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 GRIK1P39086 918 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 NCAPHQ15003 741 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 NBPF9Q3BBW0 867 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 ANKRD39Q53RE8 183 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 VHLLQ6RSH7 139 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 PPFIBP1Q86W92 1011 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 DTWD2Q8NBA8 298 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 NETO1Q8TDF5 533 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 ZNF512BQ96KM6 892 aaPredicted RBP8.62□□□□□ -1.03
DENND4A-204ENST00000562028 MKRN2Q9H000 416 aaKnown RBP8.62□□□□□ -1.03
DENND4A-204ENST00000562028 ZC3H7BQ9UGR2 993 aaKnown RBP8.62□□□□□ -1.03
DENND4A-204ENST00000562028 PCDHB10Q9UN67 800 aa8.62□□□□□ -1.03
DENND4A-204ENST00000562028 FAM155AB1AL88 458 aaPredicted RBP8.61□□□□□ -1.03
DENND4A-204ENST00000562028 U2SURPO15042 1029 aaKnown RBP8.61□□□□□ -1.03
DENND4A-204ENST00000562028 LRRN2O75325 713 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 TNK2Q07912 1038 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 IFI16Q16666 785 aaKnown RBP8.61□□□□□ -1.03
DENND4A-204ENST00000562028 DDR2Q16832 855 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 NKPD1Q17RQ9 610 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 SPACA3Q8IXA5 215 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 CCDC144CPQ8IYA2 1237 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 KLHL6Q8WZ60 621 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 SIRPGQ9P1W8 387 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 PLAGL2Q9UPG8 496 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 SNX11Q9Y5W9 270 aa8.61□□□□□ -1.03
DENND4A-204ENST00000562028 COBLO75128 1261 aa8.6□□□□□ -1.03
DENND4A-204ENST00000562028 ITIH2P19823 946 aa8.6□□□□□ -1.03
DENND4A-204ENST00000562028 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
DENND4A-204ENST00000562028 AUHQ13825 339 aaKnown RBP8.6□□□□□ -1.03
DENND4A-204ENST00000562028 TDRD10Q5VZ19 366 aaKnown RBP8.6□□□□□ -1.03
DENND4A-204ENST00000562028 C6orf15Q6UXA7 325 aaPredicted RBP8.6□□□□□ -1.03
DENND4A-204ENST00000562028 FAM178BQ8IXR5 827 aa8.6□□□□□ -1.03
DENND4A-204ENST00000562028 C7orf61Q8IZ16 206 aa8.6□□□□□ -1.03
DENND4A-204ENST00000562028 PLD6Q8N2A8 252 aaKnown RBP8.6□□□□□ -1.03
DENND4A-204ENST00000562028 CELF2-AS1Q8N7Q2 184 aa8.6□□□□□ -1.03
DENND4A-204ENST00000562028 TMEM265A0A087WTH1 108 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 DDAH1O94760 285 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 TP53P04637 393 aaPredicted RBP8.59□□□□□ -1.03
DENND4A-204ENST00000562028 CLCN7P51798 805 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 SERINC3Q13530 473 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 MSMPQ1L6U9 139 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 AXDND1Q5T1B0 1012 aaPredicted RBP8.59□□□□□ -1.03
DENND4A-204ENST00000562028 KIAA1211LQ6NV74 962 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 PMFBP1Q8TBY8 1022 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 MICAL1Q8TDZ2 1067 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 GPR62Q9BZJ7 368 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 ST14Q9Y5Y6 855 aa8.59□□□□□ -1.03
DENND4A-204ENST00000562028 GJB6O95452 261 aa8.58□□□□□ -1.04
DENND4A-204ENST00000562028 HAUS7Q99871 368 aa8.58□□□□□ -1.04
DENND4A-204ENST00000562028 ST7Q9NRC1 585 aa8.58□□□□□ -1.04
DENND4A-204ENST00000562028 PRR13Q9NZ81 148 aa8.58□□□□□ -1.04
DENND4A-204ENST00000562028 PCDHB12Q9Y5F1 795 aa8.58□□□□□ -1.04
DENND4A-204ENST00000562028 RBAK-RBAKDNI3L0D1 243 aa8.57□□□□□ -1.04
DENND4A-204ENST00000562028 SRFP11831 508 aa8.57□□□□□ -1.04
DENND4A-204ENST00000562028 ZNF143P52747 638 aaPredicted RBP8.57□□□□□ -1.04
DENND4A-204ENST00000562028 DCAF15Q66K64 600 aa8.57□□□□□ -1.04
DENND4A-204ENST00000562028 ENOX1Q8TC92 643 aaKnown RBP8.57□□□□□ -1.04
DENND4A-204ENST00000562028 MKL1Q969V6 931 aa8.57□□□□□ -1.04
DENND4A-204ENST00000562028 TRIT1Q9H3H1 467 aaKnown RBP8.57□□□□□ -1.04
DENND4A-204ENST00000562028 FAM86C1Q9NVL1 165 aa8.57□□□□□ -1.04
DENND4A-204ENST00000562028 MSRB2Q9Y3D2 182 aa8.57□□□□□ -1.04
DENND4A-204ENST00000562028 SHOXO15266 292 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 CBFA2T2O43439 604 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 IGSF3O75054 1194 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 CD247P20963 164 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 TCEAL1Q15170 157 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 CDKAL1Q5VV42 579 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 HEATR6Q6AI08 1181 aaKnown RBP8.56□□□□□ -1.04
DENND4A-204ENST00000562028 LRP10Q7Z4F1 713 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 THAP5Q7Z6K1 395 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 MISP3Q96FF7 219 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 LNPKQ9C0E8 428 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 PRDM14Q9GZV8 571 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 CCDC113Q9H0I3 377 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 ASCC2Q9H1I8 757 aaPredicted RBP8.56□□□□□ -1.04
DENND4A-204ENST00000562028 OSBPL2Q9H1P3 480 aa8.56□□□□□ -1.04
DENND4A-204ENST00000562028 DUSP15Q9H1R2 295 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms