RNA–Protein interactions for RNA: ENST00000561609.5

PKM-205, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 1,568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-205ENST00000561609 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
PKM-205ENST00000561609 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
PKM-205ENST00000561609 RCOR1Q9UKL0 485 aa13.09□□□□□ -0.31
PKM-205ENST00000561609 DICER1Q9UPY3 1922 aaKnown RBP13.09□□□□□ -0.31
PKM-205ENST00000561609 GOLGB1Q14789 3259 aaKnown RBP13.08□□□□□ -0.32
PKM-205ENST00000561609 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
PKM-205ENST00000561609 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
PKM-205ENST00000561609 MYO1BO43795 1136 aa13.08□□□□□ -0.32
PKM-205ENST00000561609 SNHG28P0DPA3 235 aa13.08□□□□□ -0.32
PKM-205ENST00000561609 XBP1P17861 261 aa13.08□□□□□ -0.32
PKM-205ENST00000561609 PFKFB3Q16875 520 aaPredicted RBP13.08□□□□□ -0.32
PKM-205ENST00000561609 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
PKM-205ENST00000561609 RTEL1Q9NZ71 1219 aa13.08□□□□□ -0.32
PKM-205ENST00000561609 HERC5Q9UII4 1024 aaKnown RBP13.08□□□□□ -0.32
PKM-205ENST00000561609 KCNJ14Q9UNX9 436 aa13.08□□□□□ -0.32
PKM-205ENST00000561609 hCG_1642624A0A1W2PR95 340 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 MPHOSPH10O00566 681 aaKnown RBP13.07□□□□□ -0.32
PKM-205ENST00000561609 PARP1P09874 1014 aaKnown RBP13.07□□□□□ -0.32
PKM-205ENST00000561609 SCG2P13521 617 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 SMARCA1P28370 1054 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 GMPSP49915 693 aaPredicted RBP13.07□□□□□ -0.32
PKM-205ENST00000561609 SAFBQ15424 915 aaKnown RBP eCLIP13.07□□□□□ -0.32
PKM-205ENST00000561609 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 NBPF9Q3BBW0 867 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 CLEC10AQ8IUN9 316 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 DIS3L2Q8IYB7 885 aaKnown RBP13.07□□□□□ -0.32
PKM-205ENST00000561609 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 SPZ1Q9BXG8 430 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 FTOQ9C0B1 505 aaKnown RBP eCLIP13.07□□□□□ -0.323e-7■□□□□ 10.4
PKM-205ENST00000561609 FOXP1Q9H334 677 aaPredicted RBP13.07□□□□□ -0.32
PKM-205ENST00000561609 VEZTQ9HBM0 779 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 VPS54Q9P1Q0 977 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 TMEM63CQ9P1W3 806 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 PGAP2Q9UHJ9 254 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 MYH4Q9Y623 1939 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 CYTH3O43739 400 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 PDHBP11177 359 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 LMNB1P20700 586 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 GNL2Q13823 731 aaKnown RBP13.07□□□□□ -0.32
PKM-205ENST00000561609 USP17L2Q6R6M4 530 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 ARHGAP27Q6ZUM4 889 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 TMEM179Q6ZVK1 233 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 RASGRP2Q7LDG7 609 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
PKM-205ENST00000561609 MKL1Q969V6 931 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 NYAP2Q9P242 653 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 MTMR7Q9Y216 660 aa13.07□□□□□ -0.32
PKM-205ENST00000561609 ZNF541Q9H0D2 1346 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 USP17L5A8MUK1 530 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 BTBD18B2RXH4 712 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 KLRF2D3W0D1 207 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 TBC1D12O60347 775 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 YEATS4O95619 227 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 NASPP49321 788 aaPredicted RBP13.06□□□□□ -0.32
PKM-205ENST00000561609 CEBPZQ03701 1054 aaKnown RBP13.06□□□□□ -0.32
PKM-205ENST00000561609 ABCB5Q2M3G0 1257 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 ASPRV1Q53RT3 343 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 MICALL2Q8IY33 904 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 SYT17Q9BSW7 474 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 KANSL2Q9H9L4 492 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 CNOT7Q9UIV1 285 aaKnown RBP13.06□□□□□ -0.32
PKM-205ENST00000561609 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 SBF1O95248 1867 aa13.06□□□□□ -0.32
PKM-205ENST00000561609 EGFRP00533 1210 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 VEGFAP15692 232 aaPredicted RBP13.05□□□□□ -0.32
PKM-205ENST00000561609 ZNF445P59923 1031 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 MAP3K10Q02779 954 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 RRP1BQ14684 758 aaKnown RBP13.05□□□□□ -0.32
PKM-205ENST00000561609 NPY5RQ15761 445 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 SHROOM1Q2M3G4 852 aaPredicted RBP13.05□□□□□ -0.32
PKM-205ENST00000561609 ZSCAN23Q3MJ62 389 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 SYAP1Q96A49 352 aaPredicted RBP13.05□□□□□ -0.32
PKM-205ENST00000561609 TMEM39BQ9GZU3 492 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.05□□□□□ -0.321e-7■■■■□ 21.3
PKM-205ENST00000561609 SH3GLB2Q9NR46 395 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 CLIC4Q9Y696 253 aa13.05□□□□□ -0.32
PKM-205ENST00000561609 EEF2P13639 858 aaKnown RBP13.04□□□□□ -0.32
PKM-205ENST00000561609 KRT2P35908 639 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 TNNI2P48788 182 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 JAG1P78504 1218 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 ZNF543Q08ER8 600 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 SEPT2Q15019 361 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
PKM-205ENST00000561609 ANO1Q5XXA6 986 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 ILDR2Q71H61 639 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 SIAH1Q8IUQ4 282 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 FAM177A1Q8N128 213 aaPredicted RBP13.04□□□□□ -0.32
PKM-205ENST00000561609 OXER1Q8TDS5 423 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 RIOX1Q9H6W3 641 aa13.04□□□□□ -0.32
PKM-205ENST00000561609 GOLGA6L4A6NEF3 574 aa13.03□□□□□ -0.32
PKM-205ENST00000561609 GDF11O95390 407 aa13.03□□□□□ -0.32
PKM-205ENST00000561609 ICA1Q05084 483 aa13.03□□□□□ -0.32
PKM-205ENST00000561609 NR5A1Q13285 461 aa13.03□□□□□ -0.32
PKM-205ENST00000561609 TNFAIP1Q13829 316 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms