RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', human

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRPA1-215	ENST00000561187	FLRT1	Q9NZU1	646 aa		32.61	■■■□□ 2.81
SNRPA1-215	ENST00000561187	SWAP70	Q9UH65	585 aa		32.61	■■■□□ 2.81
SNRPA1-215	ENST00000561187	OGDHL	Q9ULD0	1010 aa		32.61	■■■□□ 2.81
SNRPA1-215	ENST00000561187	TRMT44	Q8IYL2	757 aa	Known RBP	32.6	■■■□□ 2.81
SNRPA1-215	ENST00000561187	IVNS1ABP	Q9Y6Y0	642 aa		32.6	■■■□□ 2.81
SNRPA1-215	ENST00000561187	GLRX3	O76003	335 aa	Known RBP	32.59	■■■□□ 2.81
SNRPA1-215	ENST00000561187	CAPN2	P17655	700 aa		32.59	■■■□□ 2.81
SNRPA1-215	ENST00000561187	ICA1	Q05084	483 aa		32.59	■■■□□ 2.81
SNRPA1-215	ENST00000561187	PRO3102	Q9H379	93 aa		32.59	■■■□□ 2.81
SNRPA1-215	ENST00000561187	ATP8A2	Q9NTI2	1148 aa		32.59	■■■□□ 2.81
SNRPA1-215	ENST00000561187	STAP2	Q9UGK3	403 aa		32.59	■■■□□ 2.81
SNRPA1-215	ENST00000561187	SLC4A4	Q9Y6R1	1079 aa		32.59	■■■□□ 2.81
SNRPA1-215	ENST00000561187	USP17L12	C9JPN9	530 aa		32.58	■■■□□ 2.81
SNRPA1-215	ENST00000561187	USP17L21	D6R901	530 aa		32.58	■■■□□ 2.81
SNRPA1-215	ENST00000561187	PTPRE	P23469	700 aa		32.58	■■■□□ 2.81
SNRPA1-215	ENST00000561187	LBX2	Q6XYB7	198 aa		32.58	■■■□□ 2.81
SNRPA1-215	ENST00000561187	PUS7L	Q9H0K6	701 aa	Known RBP	32.58	■■■□□ 2.81
SNRPA1-215	ENST00000561187	SYN1	P17600	705 aa		32.57	■■■□□ 2.8
SNRPA1-215	ENST00000561187	ATP2B2	Q01814	1243 aa		32.57	■■■□□ 2.8
SNRPA1-215	ENST00000561187	AMOTL1	Q8IY63	956 aa		32.57	■■■□□ 2.8
SNRPA1-215	ENST00000561187	LAMA3	Q16787	3333 aa		32.56	■■■□□ 2.8
SNRPA1-215	ENST00000561187	PFAS	O15067	1338 aa		32.56	■■■□□ 2.8
SNRPA1-215	ENST00000561187	SLC15A5	A6NIM6	579 aa		32.56	■■■□□ 2.8
SNRPA1-215	ENST00000561187	CDK8	P49336	464 aa		32.56	■■■□□ 2.8
SNRPA1-215	ENST00000561187	UBE3C	Q15386	1083 aa		32.56	■■■□□ 2.8
SNRPA1-215	ENST00000561187	STK11IP	Q8N1F8	1099 aa		32.56	■■■□□ 2.8
SNRPA1-215	ENST00000561187	NPLOC4	Q8TAT6	608 aa		32.56	■■■□□ 2.8
SNRPA1-215	ENST00000561187	ARHGEF10L	Q9HCE6	1279 aa		32.56	■■■□□ 2.8
SNRPA1-215	ENST00000561187	PLS1	Q14651	629 aa		32.55	■■■□□ 2.8
SNRPA1-215	ENST00000561187	C12orf60	Q5U649	245 aa		32.55	■■■□□ 2.8
SNRPA1-215	ENST00000561187	DDRGK1	Q96HY6	314 aa		32.55	■■■□□ 2.8
SNRPA1-215	ENST00000561187	MOV10L1	Q9BXT6	1211 aa	Known RBP	32.55	■■■□□ 2.8
SNRPA1-215	ENST00000561187	FRMPD3	Q5JV73	1810 aa		32.54	■■■□□ 2.8
SNRPA1-215	ENST00000561187	GRB14	Q14449	540 aa		32.54	■■■□□ 2.8
SNRPA1-215	ENST00000561187	COG2	Q14746	738 aa		32.54	■■■□□ 2.8
SNRPA1-215	ENST00000561187	MFSD14C	Q5VZR4	134 aa		32.54	■■■□□ 2.8
SNRPA1-215	ENST00000561187		A0A0G2JMZ2	1700 aa		32.54	■■■□□ 2.8
SNRPA1-215	ENST00000561187	RLF	Q13129	1914 aa		32.53	■■■□□ 2.8
SNRPA1-215	ENST00000561187	RAD21	O60216	631 aa		32.53	■■■□□ 2.8
SNRPA1-215	ENST00000561187	FLOT1	O75955	427 aa		32.53	■■■□□ 2.8
SNRPA1-215	ENST00000561187	CNGA1	P29973	690 aa		32.53	■■■□□ 2.8
SNRPA1-215	ENST00000561187	CYP2C19	P33261	490 aa		32.53	■■■□□ 2.8
SNRPA1-215	ENST00000561187	SIAH1	Q8IUQ4	282 aa		32.53	■■■□□ 2.8
SNRPA1-215	ENST00000561187	ATG4C	Q96DT6	458 aa		32.53	■■■□□ 2.8
SNRPA1-215	ENST00000561187	ECHDC1	Q9NTX5	307 aa		32.53	■■■□□ 2.8
SNRPA1-215	ENST00000561187	LHX8	Q68G74	356 aa		32.52	■■■□□ 2.8
SNRPA1-215	ENST00000561187	ZSCAN25	Q6NSZ9	544 aa		32.52	■■■□□ 2.8
SNRPA1-215	ENST00000561187	C16orf86	Q6ZW13	317 aa		32.52	■■■□□ 2.8
SNRPA1-215	ENST00000561187	SPATC1L	Q9H0A9	340 aa		32.52	■■■□□ 2.8
SNRPA1-215	ENST00000561187	CTR9	Q6PD62	1173 aa		32.51	■■■□□ 2.79
SNRPA1-215	ENST00000561187	VCPKMT	Q9H867	229 aa		32.51	■■■□□ 2.79
SNRPA1-215	ENST00000561187	HOXC10	Q9NYD6	342 aa		32.51	■■■□□ 2.79
SNRPA1-215	ENST00000561187	ERCC3	P19447	782 aa		32.5	■■■□□ 2.79
SNRPA1-215	ENST00000561187	ADORA2A	P29274	412 aa		32.5	■■■□□ 2.79
SNRPA1-215	ENST00000561187	SH2D4A	Q9H788	454 aa		32.5	■■■□□ 2.79
SNRPA1-215	ENST00000561187	TMX2	Q9Y320	296 aa		32.5	■■■□□ 2.79
SNRPA1-215	ENST00000561187	EEF2	P13639	858 aa	Known RBP	32.49	■■■□□ 2.79
SNRPA1-215	ENST00000561187	DSG3	P32926	999 aa		32.49	■■■□□ 2.79
SNRPA1-215	ENST00000561187	DPP9	Q86TI2	863 aa		32.49	■■■□□ 2.79
SNRPA1-215	ENST00000561187	NCAPG2	Q86XI2	1143 aa		32.49	■■■□□ 2.79
SNRPA1-215	ENST00000561187	LPAR1	Q92633	364 aa		32.49	■■■□□ 2.79
SNRPA1-215	ENST00000561187	SOX1	O00570	391 aa	Predicted RBP	32.48	■■■□□ 2.79
SNRPA1-215	ENST00000561187	CCDC17	Q96LX7	622 aa		32.48	■■■□□ 2.79
SNRPA1-215	ENST00000561187	HOXC6	P09630	235 aa		32.47	■■■□□ 2.79
SNRPA1-215	ENST00000561187	TRPV1	Q8NER1	839 aa		32.47	■■■□□ 2.79
SNRPA1-215	ENST00000561187	GPATCH3	Q96I76	525 aa		32.47	■■■□□ 2.79
SNRPA1-215	ENST00000561187	FBXO28	Q9NVF7	368 aa		32.47	■■■□□ 2.79
SNRPA1-215	ENST00000561187	PARP14	Q460N5	1801 aa		32.47	■■■□□ 2.79
SNRPA1-215	ENST00000561187	LRRC26	Q2I0M4	334 aa		32.46	■■■□□ 2.79
SNRPA1-215	ENST00000561187	ANO1	Q5XXA6	986 aa		32.46	■■■□□ 2.79
SNRPA1-215	ENST00000561187	DCTPP1	Q9H773	170 aa		32.46	■■■□□ 2.79
SNRPA1-215	ENST00000561187	ARPP21	Q9UBL0	812 aa	Predicted RBP	32.46	■■■□□ 2.79
SNRPA1-215	ENST00000561187	DDX20	Q9UHI6	824 aa	Known RBP	32.46	■■■□□ 2.79
SNRPA1-215	ENST00000561187	ZNF236	Q9UL36	1845 aa		32.45	■■■□□ 2.79
SNRPA1-215	ENST00000561187	WDR46	O15213	610 aa	Known RBP	32.45	■■■□□ 2.79
SNRPA1-215	ENST00000561187	COL6A1	P12109	1028 aa		32.45	■■■□□ 2.79
SNRPA1-215	ENST00000561187	KBTBD3	Q8NAB2	608 aa		32.45	■■■□□ 2.79
SNRPA1-215	ENST00000561187	OSBP2	Q969R2	916 aa		32.45	■■■□□ 2.79
SNRPA1-215	ENST00000561187	LRCH3	Q96II8	777 aa		32.45	■■■□□ 2.79
SNRPA1-215	ENST00000561187	STRBP	Q96SI9	672 aa	Known RBP	32.45	■■■□□ 2.79
SNRPA1-215	ENST00000561187	COL11A1	P12107	1806 aa	Predicted RBP	32.44	■■■□□ 2.78
SNRPA1-215	ENST00000561187	MINDY4B	A8MYZ0	360 aa		32.44	■■■□□ 2.78
SNRPA1-215	ENST00000561187	COBL	O75128	1261 aa		32.44	■■■□□ 2.78
SNRPA1-215	ENST00000561187	MAGEA10	P43363	369 aa	Predicted RBP	32.44	■■■□□ 2.78
SNRPA1-215	ENST00000561187	MB21D1	Q8N884	522 aa		32.44	■■■□□ 2.78
SNRPA1-215	ENST00000561187	GDF15	Q99988	308 aa		32.44	■■■□□ 2.78
SNRPA1-215	ENST00000561187	KANSL2	Q9H9L4	492 aa		32.43	■■■□□ 2.78
SNRPA1-215	ENST00000561187	DNAH12	Q6ZR08	3092 aa		32.43	■■■□□ 2.78
SNRPA1-215	ENST00000561187	GSG1L2	A8MUP6	293 aa		32.42	■■■□□ 2.78
SNRPA1-215	ENST00000561187		M0R2C6	588 aa		32.42	■■■□□ 2.78
SNRPA1-215	ENST00000561187	CYBA	P13498	195 aa		32.42	■■■□□ 2.78
SNRPA1-215	ENST00000561187	TMEM132B	Q14DG7	1078 aa		32.42	■■■□□ 2.78
SNRPA1-215	ENST00000561187	FAM83B	Q5T0W9	1011 aa		32.42	■■■□□ 2.78
SNRPA1-215	ENST00000561187	SHCBP1	Q8NEM2	672 aa		32.42	■■■□□ 2.78
SNRPA1-215	ENST00000561187	APPBP2	Q92624	585 aa		32.42	■■■□□ 2.78
SNRPA1-215	ENST00000561187	SENP6	Q9GZR1	1112 aa	Predicted RBP	32.42	■■■□□ 2.78
SNRPA1-215	ENST00000561187	MYCN	P04198	464 aa	Predicted RBP	32.41	■■■□□ 2.78
SNRPA1-215	ENST00000561187	NUP88	Q99567	741 aa	Predicted RBP	32.41	■■■□□ 2.78
SNRPA1-215	ENST00000561187	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	32.41	■■■□□ 2.78
SNRPA1-215	ENST00000561187	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	32.41	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms