RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 HOXD10P28358 340 aa15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 NMIQ13287 307 aaPredicted RBP15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 IRF5Q13568 498 aa15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 GIMAP6Q6P9H5 292 aa15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 SLAIN1Q8ND83 568 aa15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 TRIB2Q92519 343 aa15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 NUP88Q99567 741 aaPredicted RBP15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 VCPKMTQ9H867 229 aa15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 FBXO28Q9NVF7 368 aa15.16■□□□□ 0.02
CHRNA3-208ENST00000561128 MYH4Q9Y623 1939 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 PATL2C9JE40 543 aaKnown RBP15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 USP14P54578 494 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 CCL14Q16627 93 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 RASGRP2Q7LDG7 609 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 GPRC5AQ8NFJ5 357 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 USP6NLQ92738 828 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 ATG4CQ96DT6 458 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 DDRGK1Q96HY6 314 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 CCDC17Q96LX7 622 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 TANGO6Q9C0B7 1094 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 ZNF236Q9UL36 1845 aa15.15■□□□□ 0.02
CHRNA3-208ENST00000561128 APPP05067 770 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 ATP2B2Q01814 1243 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 CTDSPL2Q05D32 466 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 AAMPQ13685 434 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 MORN1Q5T089 497 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 LBX2Q6XYB7 198 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 GPR142Q7Z601 462 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 NBPF11Q86T75 865 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 COA7Q96BR5 231 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 IL25Q9H293 177 aa15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 MKI67P46013 3256 aaKnown RBP15.14■□□□□ 0.01
CHRNA3-208ENST00000561128 PLIN4Q96Q06 1357 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 LAMA4Q16363 1823 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 GNAT2P19087 354 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 CYP2B6P20813 491 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 PPARAQ07869 468 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 FAM47AQ5JRC9 791 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 SAMD1Q6SPF0 538 aaPredicted RBP15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 AMOTL1Q8IY63 956 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 PXYLP1Q8TE99 480 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 CEP95Q96GE4 821 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 TMEM106CQ9BVX2 250 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 NBPF3Q9H094 633 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 ARHGEF10LQ9HCE6 1279 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 BIN2Q9UBW5 565 aaPredicted RBP15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 RABGAP1Q9Y3P9 1069 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 FRMPD3Q5JV73 1810 aa15.13■□□□□ 0.01
CHRNA3-208ENST00000561128 GSPT1P15170 499 aaKnown RBP15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 FAM83BQ5T0W9 1011 aa15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 UBE2Q1Q7Z7E8 422 aa15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 LRRC47Q8N1G4 583 aaKnown RBP15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 MOV10L1Q9BXT6 1211 aaKnown RBP15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 RNF208Q9H0X6 261 aa15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 NAPBQ9H115 298 aa15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 OSBPL3Q9H4L5 887 aa15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 FLRT1Q9NZU1 646 aa15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 ZBTB47Q9UFB7 747 aaPredicted RBP15.12■□□□□ 0.01
CHRNA3-208ENST00000561128 ALPK3Q96L96 1907 aa15.11■□□□□ 0.01
CHRNA3-208ENST00000561128 TRIM6-TRIM34B2RNG4 842 aa15.11■□□□□ 0.01
CHRNA3-208ENST00000561128 NMT2O60551 498 aa15.11■□□□□ 0.01
CHRNA3-208ENST00000561128 NDUFB10O96000 172 aa15.11■□□□□ 0.01
CHRNA3-208ENST00000561128 DSG3P32926 999 aa15.11■□□□□ 0.01
CHRNA3-208ENST00000561128 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
CHRNA3-208ENST00000561128 KANSL2Q9H9L4 492 aa15.11■□□□□ 0.01
CHRNA3-208ENST00000561128 MKNK2Q9HBH9 465 aa15.11■□□□□ 0.01
CHRNA3-208ENST00000561128 PAK6Q9NQU5 681 aaPredicted RBP15.11■□□□□ 0.01
CHRNA3-208ENST00000561128 WDR46O15213 610 aaKnown RBP15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 FLOT1O75955 427 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 HMGCRP04035 888 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 GJB1P08034 283 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 MAPK4P31152 587 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 GJA8P48165 433 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 COG2Q14746 738 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 TMEM132BQ14DG7 1078 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 PLEKHH3Q7Z736 793 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 SKAP1Q86WV1 359 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 REPS2Q8NFH8 660 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 NPLOC4Q8TAT6 608 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 U2AF1L4Q8WU68 220 aaKnown RBP15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 GTF3C2Q8WUA4 911 aaPredicted RBP15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 LPAR1Q92633 364 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 CHMP4CQ96CF2 233 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 NYAP2Q9P242 653 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 PDE4DIPQ5VU43 2346 aa15.1■□□□□ 0.01
CHRNA3-208ENST00000561128 RAD21O60216 631 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 SDSP20132 328 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 UBXN2AP68543 259 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 LRRFIP1Q32MZ4 808 aaKnown RBP15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 MAP3K21Q5TCX8 1036 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 WDR78Q5VTH9 848 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 TBC1D10CQ8IV04 446 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 DIS3LQ8TF46 1054 aaKnown RBP15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 SOCS4Q8WXH5 440 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 DEFB118Q96PH6 123 aa15.09■□□□□ 0.01
CHRNA3-208ENST00000561128 APBA2Q99767 749 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms