RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 DEFB129Q9H1M3 183 aa8.67□□□□□ -1.02
IDH3A-220ENST00000560667 DHX36Q9H2U1 1008 aaKnown RBP8.67□□□□□ -1.02
IDH3A-220ENST00000560667 KAT14Q9H8E8 782 aa8.67□□□□□ -1.02
IDH3A-220ENST00000560667 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.67□□□□□ -1.026e-7■■□□□ 13.7
IDH3A-220ENST00000560667 POTECB2RU33 542 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 RAD21O60216 631 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 IFNAR1P17181 557 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 SLC16A2P36021 539 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.02
IDH3A-220ENST00000560667 IL27Q8NEV9 243 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 OXER1Q8TDS5 423 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 NUP88Q99567 741 aaPredicted RBP8.66□□□□□ -1.02
IDH3A-220ENST00000560667 ALG1Q9BT22 464 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 LMBRD1Q9NUN5 540 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 WDR33Q9C0J8 1336 aaKnown RBP8.66□□□□□ -1.02
IDH3A-220ENST00000560667 H7C1D1 291 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 NPM3O75607 178 aaKnown RBP8.66□□□□□ -1.02
IDH3A-220ENST00000560667 TOMM70O94826 608 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 POTEIP0CG38 1075 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 POTEJP0CG39 1038 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 RPS12P25398 132 aaKnown RBP8.66□□□□□ -1.02
IDH3A-220ENST00000560667 SNAP25P60880 206 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 EARS2Q5JPH6 523 aaKnown RBP8.66□□□□□ -1.02
IDH3A-220ENST00000560667 TYW1BQ6NUM6 668 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 CLEC17AQ6ZS10 378 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 KCTD1Q719H9 257 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 USP48Q86UV5 1035 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 SPICE1Q8N0Z3 855 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 FBXO18Q8NFZ0 1043 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 MTA3Q9BTC8 594 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 EHD4Q9H223 541 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 GPCPD1Q9NPB8 672 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 VPS54Q9P1Q0 977 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 ATRNL1Q5VV63 1379 aa8.66□□□□□ -1.02
IDH3A-220ENST00000560667 CENPFP49454 3210 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 PALM3A6NDB9 673 aaPredicted RBP8.65□□□□□ -1.02
IDH3A-220ENST00000560667 FAM205CA6NFA0 338 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 PHF20L1A8MW92 1017 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 H3BQV1 296 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 FMNL1O95466 1100 aaPredicted RBP8.65□□□□□ -1.02
IDH3A-220ENST00000560667 TAL1P17542 331 aaPredicted RBP8.65□□□□□ -1.02
IDH3A-220ENST00000560667 SSRP1Q08945 709 aaKnown RBP8.65□□□□□ -1.02
IDH3A-220ENST00000560667 RESTQ13127 1097 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 ABCB5Q2M3G0 1257 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 KRT40Q6A162 431 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 TMTC3Q6ZXV5 915 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 ZKSCAN4Q969J2 545 aaPredicted RBP8.65□□□□□ -1.02
IDH3A-220ENST00000560667 C8orf76Q96K31 380 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 GZF1Q9H116 711 aaPredicted RBP8.65□□□□□ -1.02
IDH3A-220ENST00000560667 NMRK2Q9NPI5 230 aa8.65□□□□□ -1.02
IDH3A-220ENST00000560667 BTBD18B2RXH4 712 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 KLRF2D3W0D1 207 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 MYO1BO43795 1136 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 DHX16O60231 1041 aaKnown RBP8.65□□□□□ -1.03
IDH3A-220ENST00000560667 PDHBP11177 359 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 INPP5BP32019 993 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 NR5A1Q13285 461 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 ZYXQ15942 572 aaKnown RBP8.65□□□□□ -1.03
IDH3A-220ENST00000560667 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.03
IDH3A-220ENST00000560667 ZNF287Q9HBT7 754 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 GGA3Q9NZ52 723 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 TMOD2Q9NZR1 351 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 SWAP70Q9UH65 585 aa8.65□□□□□ -1.03
IDH3A-220ENST00000560667 ADM5C9JUS6 153 aa8.64□□□□□ -1.03
IDH3A-220ENST00000560667 TTLL1O95922 423 aa8.64□□□□□ -1.03
IDH3A-220ENST00000560667 TOP1P11387 765 aaKnown RBP8.64□□□□□ -1.03
IDH3A-220ENST00000560667 NCLP19338 710 aaKnown RBP8.64□□□□□ -1.03
IDH3A-220ENST00000560667 HMGN5P82970 282 aaKnown RBP8.64□□□□□ -1.03
IDH3A-220ENST00000560667 GRM4Q14833 912 aa8.64□□□□□ -1.03
IDH3A-220ENST00000560667 MOB2Q70IA6 237 aa8.64□□□□□ -1.03
IDH3A-220ENST00000560667 FAM83AQ86UY5 434 aa8.64□□□□□ -1.03
IDH3A-220ENST00000560667 GPT2Q8TD30 523 aa8.64□□□□□ -1.03
IDH3A-220ENST00000560667 WNT7AO00755 349 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 FIBPO43427 364 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 TRAK2O60296 914 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 DDAH1O94760 285 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 APLP1P51693 650 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 NPY5RQ15761 445 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 HOMER1Q86YM7 354 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 CTCFLQ8NI51 663 aaPredicted RBP8.63□□□□□ -1.03
IDH3A-220ENST00000560667 TRIM34Q9BYJ4 488 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 CNTNAP5Q8WYK1 1306 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 F5H6K3 240 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 PRPF3O43395 683 aaKnown RBP8.63□□□□□ -1.03
IDH3A-220ENST00000560667 KIF23Q02241 960 aaPredicted RBP8.63□□□□□ -1.03
IDH3A-220ENST00000560667 MAP3K10Q02779 954 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 KLRC3Q07444 240 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 FKBP1CQ5VVH2 108 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 USP28Q96RU2 1077 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 PIGSQ96S52 555 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
IDH3A-220ENST00000560667 CLIC4Q9Y696 253 aa8.63□□□□□ -1.03
IDH3A-220ENST00000560667 NID2Q14112 1375 aa8.62□□□□□ -1.03
IDH3A-220ENST00000560667 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
IDH3A-220ENST00000560667 USP17L10C9JJH3 530 aa8.62□□□□□ -1.03
IDH3A-220ENST00000560667 PPP1R11O60927 126 aaPredicted RBP8.62□□□□□ -1.03
IDH3A-220ENST00000560667 PDCP20941 246 aa8.62□□□□□ -1.03
IDH3A-220ENST00000560667 CAP2P40123 477 aa8.62□□□□□ -1.03
IDH3A-220ENST00000560667 ICA1Q05084 483 aa8.62□□□□□ -1.03
IDH3A-220ENST00000560667 RASGRP4Q8TDF6 673 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms