RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 KIAA0355O15063 1070 aa15.71■□□□□ 0.11
RABGGTA-213ENST00000560127 STRNO43815 780 aa15.71■□□□□ 0.11
RABGGTA-213ENST00000560127 CLTBP09497 229 aa15.71■□□□□ 0.11
RABGGTA-213ENST00000560127 DYNLL1P63167 89 aaKnown RBP15.71■□□□□ 0.11
RABGGTA-213ENST00000560127 RAB3GAP1Q15042 981 aa15.71■□□□□ 0.11
RABGGTA-213ENST00000560127 FAM47AQ5JRC9 791 aa15.71■□□□□ 0.11
RABGGTA-213ENST00000560127 ZNF576Q9H609 170 aa15.71■□□□□ 0.11
RABGGTA-213ENST00000560127 PHF24Q9UPV7 400 aa15.71■□□□□ 0.11
RABGGTA-213ENST00000560127 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.7■□□□□ 0.1
RABGGTA-213ENST00000560127 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.7■□□□□ 0.1
RABGGTA-213ENST00000560127 CYP2E1P05181 493 aaPredicted RBP15.7■□□□□ 0.1
RABGGTA-213ENST00000560127 PLA2G5P39877 138 aa15.7■□□□□ 0.1
RABGGTA-213ENST00000560127 SLFN5Q08AF3 891 aa15.7■□□□□ 0.1
RABGGTA-213ENST00000560127 ANP32CO43423 234 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 ERCC3P19447 782 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 GUCY1A2P33402 732 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 FPGSQ05932 587 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 ABCB5Q2M3G0 1257 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 CERKLQ49MI3 558 aaPredicted RBP15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 TIFAQ96CG3 184 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 API5Q9BZZ5 524 aaKnown RBP15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 SPATC1LQ9H0A9 340 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 EHD4Q9H223 541 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 SERPINB13Q9UIV8 391 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 NAV1Q8NEY1 1877 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 MCM3APO60318 1980 aa15.69■□□□□ 0.1
RABGGTA-213ENST00000560127 PQBP1O60828 265 aaKnown RBP15.68■□□□□ 0.1
RABGGTA-213ENST00000560127 RAG1P15918 1043 aa15.68■□□□□ 0.1
RABGGTA-213ENST00000560127 SHCBP1Q8NEM2 672 aa15.68■□□□□ 0.1
RABGGTA-213ENST00000560127 ATXN2LQ8WWM7 1075 aaKnown RBP15.68■□□□□ 0.1
RABGGTA-213ENST00000560127 PPM1EQ8WY54 764 aa15.68■□□□□ 0.1
RABGGTA-213ENST00000560127 PIH1D3Q9NQM4 214 aaKnown RBP15.68■□□□□ 0.1
RABGGTA-213ENST00000560127 GNAI3P08754 354 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 SHMT1P34896 483 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 COG2Q14746 738 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 TTC39AQ5SRH9 613 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 ADAMTS19Q8TE59 1207 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 MAML3Q96JK9 1138 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 ASB2Q96Q27 587 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 XPNPEP3Q9NQH7 507 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 TMEM39AQ9NV64 488 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 HOXC10Q9NYD6 342 aa15.67■□□□□ 0.1
RABGGTA-213ENST00000560127 PRRC2BQ5JSZ5 2229 aaKnown RBP15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 A0A1W2PQ45 241 aaPredicted RBP15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 A0A1W2PQY0 241 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 A0A1W2PRG0 241 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 FAAP100Q0VG06 881 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 G3BP1Q13283 466 aaKnown RBP eCLIP15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 AKNAD1Q5T1N1 836 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 ABRAQ8N0Z2 381 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 FAM122AQ96E09 287 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 DBNDD2Q9BQY9 259 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 CABP5Q9NP86 173 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 SLC5A4Q9NY91 659 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 THEGQ9P2T0 379 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 BRWD1Q9NSI6 2320 aa15.66■□□□□ 0.1
RABGGTA-213ENST00000560127 MUC6Q6W4X9 2439 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 PNMA6EA0A0J9YXQ4 647 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 IGSF3O75054 1194 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 PGK1P00558 417 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 RARBP10826 455 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 CYP7A1P22680 504 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 PBX2P40425 430 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 ZAP70P43403 619 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 USP5P45974 858 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 SEPT2Q15019 361 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 MIGA1Q8NAN2 632 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 GAS2L1Q99501 681 aaPredicted RBP15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.65■□□□□ 0.18e-7■□□□□ 10.4
RABGGTA-213ENST00000560127 TANGO6Q9C0B7 1094 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 PRDM12Q9H4Q4 367 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 MROH8Q9H579 483 aa15.65■□□□□ 0.1
RABGGTA-213ENST00000560127 GRXCR1A8MXD5 290 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 PLCD1P51178 756 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 MAP3K12Q12852 859 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 TNNI3KQ59H18 835 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 KIAA1755Q5JYT7 1200 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 CCDC158Q5M9N0 1113 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 ANKRD33Q7Z3H0 272 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 RNF180Q86T96 592 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 TTC6Q86TZ1 520 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 NCAPG2Q86XI2 1143 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 TOX2Q96NM4 488 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 UHRF1Q96T88 793 aaPredicted RBP15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 PBX4Q9BYU1 374 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 NRBP1Q9UHY1 535 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 FPGT-TNNI3KV9GXZ4 949 aa15.64■□□□□ 0.09
RABGGTA-213ENST00000560127 ROBO3Q96MS0 1386 aa15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 TIMP1P01033 207 aa15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 TAL1P17542 331 aaPredicted RBP15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 DSG3P32926 999 aa15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 MRPS5P82675 430 aaKnown RBP15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 ADGRE1Q14246 886 aa15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 PLS1Q14651 629 aa15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 C16orf59Q7L2K0 433 aa15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 TRMT2AQ8IZ69 625 aaKnown RBP15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 MB21D1Q8N884 522 aa15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 SLC44A5Q8NCS7 719 aa15.63■□□□□ 0.09
RABGGTA-213ENST00000560127 LENG1Q96BZ8 264 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms