RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 ZSCAN23Q3MJ62 389 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 CERKLQ49MI3 558 aaPredicted RBP27.17■■□□□ 1.94
TM2D3-209ENST00000560013 RTEL1Q9NZ71 1219 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 GOLGA6L4A6NEF3 574 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 FAM196BA6NMK8 535 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 MPHOSPH10O00566 681 aaKnown RBP27.17■■□□□ 1.94
TM2D3-209ENST00000560013 MYO1BO43795 1136 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 PRELPP51888 382 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 PPP4R3BQ5MIZ7 849 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 FKBP1CQ5VVH2 108 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 FAM151AQ8WW52 585 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 ZBED3Q96IU2 234 aaPredicted RBP27.17■■□□□ 1.94
TM2D3-209ENST00000560013 LZTS2Q9BRK4 669 aa27.17■■□□□ 1.94
TM2D3-209ENST00000560013 MYH4Q9Y623 1939 aa27.16■■□□□ 1.94
TM2D3-209ENST00000560013 FZD9O00144 591 aa27.16■■□□□ 1.94
TM2D3-209ENST00000560013 EIF6P56537 245 aaKnown RBP27.16■■□□□ 1.94
TM2D3-209ENST00000560013 DIS3L2Q8IYB7 885 aaKnown RBP27.16■■□□□ 1.94
TM2D3-209ENST00000560013 CSRNP1Q96S65 589 aa27.16■■□□□ 1.94
TM2D3-209ENST00000560013 FOXP1Q9H334 677 aaPredicted RBP27.16■■□□□ 1.94
TM2D3-209ENST00000560013 MYOZ2Q9NPC6 264 aa27.16■■□□□ 1.94
TM2D3-209ENST00000560013 VPS54Q9P1Q0 977 aa27.16■■□□□ 1.94
TM2D3-209ENST00000560013 CLIP2Q9UDT6 1046 aa27.16■■□□□ 1.94
TM2D3-209ENST00000560013 BTBD18B2RXH4 712 aa27.15■■□□□ 1.94
TM2D3-209ENST00000560013 PARP1P09874 1014 aaKnown RBP27.15■■□□□ 1.94
TM2D3-209ENST00000560013 PFKFB3Q16875 520 aaPredicted RBP27.15■■□□□ 1.94
TM2D3-209ENST00000560013 POLR3EQ9NVU0 708 aa27.15■■□□□ 1.94
TM2D3-209ENST00000560013 SCG2P13521 617 aa27.15■■□□□ 1.94
TM2D3-209ENST00000560013 PGBD1Q96JS3 809 aa27.15■■□□□ 1.94
TM2D3-209ENST00000560013 PHF20Q9BVI0 1012 aa27.15■■□□□ 1.94
TM2D3-209ENST00000560013 KLRF2D3W0D1 207 aa27.14■■□□□ 1.94
TM2D3-209ENST00000560013 WNT10BO00744 389 aa27.14■■□□□ 1.94
TM2D3-209ENST00000560013 NOSTRINQ8IVI9 506 aa27.14■■□□□ 1.94
TM2D3-209ENST00000560013 SHISA4Q96DD7 197 aa27.14■■□□□ 1.94
TM2D3-209ENST00000560013 VEZTQ9HBM0 779 aa27.14■■□□□ 1.94
TM2D3-209ENST00000560013 ZNF280AP59817 542 aaPredicted RBP27.13■■□□□ 1.93
TM2D3-209ENST00000560013 ZNF445P59923 1031 aa27.13■■□□□ 1.93
TM2D3-209ENST00000560013 CLIC4Q9Y696 253 aa27.13■■□□□ 1.93
TM2D3-209ENST00000560013 CNTNAP1P78357 1384 aa27.13■■□□□ 1.93
TM2D3-209ENST00000560013 YEATS4O95619 227 aa27.13■■□□□ 1.93
TM2D3-209ENST00000560013 GOLGA8HP0CJ92 632 aa27.13■■□□□ 1.93
TM2D3-209ENST00000560013 USP17L2Q6R6M4 530 aa27.13■■□□□ 1.93
TM2D3-209ENST00000560013 CLEC10AQ8IUN9 316 aa27.13■■□□□ 1.93
TM2D3-209ENST00000560013 FHDC1Q9C0D6 1143 aaPredicted RBP27.13■■□□□ 1.93
TM2D3-209ENST00000560013 HERC5Q9UII4 1024 aaKnown RBP27.13■■□□□ 1.93
TM2D3-209ENST00000560013 SMARCA1P28370 1054 aa27.12■■□□□ 1.93
TM2D3-209ENST00000560013 NASPP49321 788 aaPredicted RBP27.12■■□□□ 1.93
TM2D3-209ENST00000560013 FAM83AQ86UY5 434 aa27.12■■□□□ 1.93
TM2D3-209ENST00000560013 LRRC47Q8N1G4 583 aaKnown RBP27.12■■□□□ 1.93
TM2D3-209ENST00000560013 LINC00301Q8NCQ3 95 aa27.12■■□□□ 1.93
TM2D3-209ENST00000560013 DPF2Q92785 391 aa27.12■■□□□ 1.93
TM2D3-209ENST00000560013 SPZ1Q9BXG8 430 aa27.12■■□□□ 1.93
TM2D3-209ENST00000560013 SHTN1A0MZ66 631 aa27.11■■□□□ 1.93
TM2D3-209ENST00000560013 USP17L5A8MUK1 530 aa27.11■■□□□ 1.93
TM2D3-209ENST00000560013 CYTH3O43739 400 aa27.11■■□□□ 1.93
TM2D3-209ENST00000560013 PDHBP11177 359 aa27.11■■□□□ 1.93
TM2D3-209ENST00000560013 NBPF9Q3BBW0 867 aa27.11■■□□□ 1.93
TM2D3-209ENST00000560013 ANO1Q5XXA6 986 aa27.11■■□□□ 1.93
TM2D3-209ENST00000560013 RASGRP2Q7LDG7 609 aa27.11■■□□□ 1.93
TM2D3-209ENST00000560013 PIBF1Q8WXW3 757 aa27.11■■□□□ 1.93
TM2D3-209ENST00000560013 KANSL2Q9H9L4 492 aa27.11■■□□□ 1.93
TM2D3-209ENST00000560013 FSD2A1L4K1 749 aa27.1■■□□□ 1.93
TM2D3-209ENST00000560013 GOLGA6L3A6NEY3 463 aa27.1■■□□□ 1.93
TM2D3-209ENST00000560013 SLC35G1Q2M3R5 365 aa27.1■■□□□ 1.93
TM2D3-209ENST00000560013 TMEM179Q6ZVK1 233 aa27.1■■□□□ 1.93
TM2D3-209ENST00000560013 ISY1Q9ULR0 285 aaKnown RBP27.1■■□□□ 1.93
TM2D3-209ENST00000560013 SNHG28P0DPA3 235 aa27.1■■□□□ 1.93
TM2D3-209ENST00000560013 STK38Q15208 465 aa27.1■■□□□ 1.93
TM2D3-209ENST00000560013 CCDC183Q5T5S1 534 aa27.1■■□□□ 1.93
TM2D3-209ENST00000560013 GJA3Q9Y6H8 435 aa27.1■■□□□ 1.93
TM2D3-209ENST00000560013 DICER1Q9UPY3 1922 aaKnown RBP27.1■■□□□ 1.93
TM2D3-209ENST00000560013 KRT2P35908 639 aa27.09■■□□□ 1.93
TM2D3-209ENST00000560013 GMPSP49915 693 aaPredicted RBP27.09■■□□□ 1.93
TM2D3-209ENST00000560013 NR5A1Q13285 461 aa27.09■■□□□ 1.93
TM2D3-209ENST00000560013 ABCB5Q2M3G0 1257 aa27.09■■□□□ 1.93
TM2D3-209ENST00000560013 ASPRV1Q53RT3 343 aa27.09■■□□□ 1.93
TM2D3-209ENST00000560013 ARHGAP27Q6ZUM4 889 aa27.09■■□□□ 1.93
TM2D3-209ENST00000560013 KCNG4Q8TDN1 519 aa27.09■■□□□ 1.93
TM2D3-209ENST00000560013 OXER1Q8TDS5 423 aa27.09■■□□□ 1.93
TM2D3-209ENST00000560013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.09■■□□□ 1.931e-9■■■□□ 17.9
TM2D3-209ENST00000560013 NYAP2Q9P242 653 aa27.09■■□□□ 1.93
TM2D3-209ENST00000560013 VEGFAP15692 232 aaPredicted RBP27.08■■□□□ 1.93
TM2D3-209ENST00000560013 ATP2B2Q01814 1243 aa27.08■■□□□ 1.93
TM2D3-209ENST00000560013 BICD2Q8TD16 824 aa27.08■■□□□ 1.93
TM2D3-209ENST00000560013 MKL1Q969V6 931 aa27.08■■□□□ 1.93
TM2D3-209ENST00000560013 BRMS1Q9HCU9 246 aa27.08■■□□□ 1.93
TM2D3-209ENST00000560013 SH3GLB2Q9NR46 395 aa27.08■■□□□ 1.93
TM2D3-209ENST00000560013 ME1P48163 572 aa27.08■■□□□ 1.93
TM2D3-209ENST00000560013 RBM26Q5T8P6 1007 aaKnown RBP27.08■■□□□ 1.93
TM2D3-209ENST00000560013 MICALL2Q8IY33 904 aa27.08■■□□□ 1.93
TM2D3-209ENST00000560013 SYCE3A1L190 88 aa27.07■■□□□ 1.92
TM2D3-209ENST00000560013 SPTLC2O15270 562 aa27.07■■□□□ 1.92
TM2D3-209ENST00000560013 LIG1P18858 919 aa27.07■■□□□ 1.92
TM2D3-209ENST00000560013 SEPT2Q15019 361 aa27.07■■□□□ 1.92
TM2D3-209ENST00000560013 SF3A1Q15459 793 aaKnown RBP27.07■■□□□ 1.92
TM2D3-209ENST00000560013 SHROOM1Q2M3G4 852 aaPredicted RBP27.07■■□□□ 1.92
TM2D3-209ENST00000560013 GAS2L3Q86XJ1 694 aa27.07■■□□□ 1.92
TM2D3-209ENST00000560013 CNOT7Q9UIV1 285 aaKnown RBP27.07■■□□□ 1.92
TM2D3-209ENST00000560013 GDF11O95390 407 aa27.06■■□□□ 1.92
TM2D3-209ENST00000560013 EEF2P13639 858 aaKnown RBP27.06■■□□□ 1.92
TM2D3-209ENST00000560013 NLRP5P59047 1200 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms