RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 RRAGCQ9HB90 399 aa14.19□□□□□ -0.14
HERC1-205ENST00000559886 SYT1P21579 422 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 NUCB2P80303 420 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 FUT2Q10981 343 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 TMTC3Q6ZXV5 915 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 NBPF11Q86T75 865 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 USP48Q86UV5 1035 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 MAD2L2Q9UI95 211 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 SYNPO2Q9UMS6 1093 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 KIF3AQ9Y496 699 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 STK36Q9NRP7 1315 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 PALM3A6NDB9 673 aaPredicted RBP14.18□□□□□ -0.14
HERC1-205ENST00000559886 PPFIA3O75145 1194 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 SNHG28P0DPA3 235 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 PDHBP11177 359 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 PDCP20941 246 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 PKP1Q13835 747 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 DLK2Q6UY11 383 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 FAM184AQ8NB25 1140 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 PHKBQ93100 1093 aa14.18□□□□□ -0.14
HERC1-205ENST00000559886 ORC3Q9UBD5 711 aaPredicted RBP14.18□□□□□ -0.14
HERC1-205ENST00000559886 PAPPA2Q9BXP8 1791 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 PLEKHA8P1O95397 391 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 FMNL1O95466 1100 aaPredicted RBP14.17□□□□□ -0.14
HERC1-205ENST00000559886 PDIA4P13667 645 aaKnown RBP14.17□□□□□ -0.14
HERC1-205ENST00000559886 INPP5BP32019 993 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 GNAQP50148 359 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 LARP1BQ659C4 914 aaKnown RBP14.17□□□□□ -0.14
HERC1-205ENST00000559886 CDC37L1Q7L3B6 337 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 CMTR1Q8N1G2 835 aaKnown RBP14.17□□□□□ -0.14
HERC1-205ENST00000559886 STAG2Q8N3U4 1231 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 KLRG1Q96E93 195 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 USP17L5A8MUK1 530 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 PARP1P09874 1014 aaKnown RBP14.17□□□□□ -0.14
HERC1-205ENST00000559886 POTEIP0CG38 1075 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 POTEJP0CG39 1038 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 SSRP1Q08945 709 aaKnown RBP14.17□□□□□ -0.14
HERC1-205ENST00000559886 RASGRP2Q7LDG7 609 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 SRBD1Q8N5C6 995 aaKnown RBP14.17□□□□□ -0.14
HERC1-205ENST00000559886 WRNIP1Q96S55 665 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 ARHGEF10LQ9HCE6 1279 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 MTMR7Q9Y216 660 aa14.17□□□□□ -0.14
HERC1-205ENST00000559886 A0A1W2PRG0 241 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 STX6O43752 255 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 USP17L2Q6R6M4 530 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 TRIM22Q8IYM9 498 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 CCDC82Q8N4S0 544 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 GMCL1P1Q8NEA9 526 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 CDCA5Q96FF9 252 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 SLC26A6Q9BXS9 759 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 RNF26Q9BY78 433 aaPredicted RBP14.16□□□□□ -0.14
HERC1-205ENST00000559886 GLIS2Q9BZE0 524 aaPredicted RBP14.16□□□□□ -0.14
HERC1-205ENST00000559886 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.16□□□□□ -0.14
HERC1-205ENST00000559886 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 TMX2Q9Y320 296 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 ZDHHC9Q9Y397 364 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 PHIPQ8WWQ0 1821 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 USP2O75604 605 aaPredicted RBP14.16□□□□□ -0.14
HERC1-205ENST00000559886 BRD1O95696 1058 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 ASPRV1Q53RT3 343 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 SCYL3Q8IZE3 742 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 LZTS2Q9BRK4 669 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 FZD1Q9UP38 647 aa14.16□□□□□ -0.14
HERC1-205ENST00000559886 OTOFQ9HC10 1997 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.15□□□□□ -0.14
HERC1-205ENST00000559886 ACER1Q8TDN7 264 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 CNTNAP5Q8WYK1 1306 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 WDR33Q9C0J8 1336 aaKnown RBP14.15□□□□□ -0.14
HERC1-205ENST00000559886 KLRF2D3W0D1 207 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 F5H6K3 240 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 PRPF3O43395 683 aaKnown RBP14.15□□□□□ -0.14
HERC1-205ENST00000559886 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
HERC1-205ENST00000559886 GOLGA8HP0CJ92 632 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 SMARCA1P28370 1054 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 ECE1P42892 770 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 KLRC3Q07444 240 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 ZNF543Q08ER8 600 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 ZKSCAN4Q969J2 545 aaPredicted RBP14.15□□□□□ -0.14
HERC1-205ENST00000559886 NMRK2Q9NPI5 230 aa14.15□□□□□ -0.14
HERC1-205ENST00000559886 DEXIO95424 95 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 NF2P35240 595 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 NOL9Q5SY16 702 aaKnown RBP14.14□□□□□ -0.15
HERC1-205ENST00000559886 GPATCH4Q5T3I0 446 aaKnown RBP14.14□□□□□ -0.15
HERC1-205ENST00000559886 SLFN13Q68D06 897 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 LDHDQ86WU2 507 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 DCAF4Q8WV16 495 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 GMCL1Q96IK5 515 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 SH2D4AQ9H788 454 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 MTMR6Q9Y217 621 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 UBE2Q2LH0YL09 131 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 NDUFB10O96000 172 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 PRKG1Q13976 671 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 SLC35G1Q2M3R5 365 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 MAP1SQ66K74 1059 aaPredicted RBP14.14□□□□□ -0.15
HERC1-205ENST00000559886 CCDC84Q86UT8 332 aaPredicted RBP14.14□□□□□ -0.15
HERC1-205ENST00000559886 RGS22Q8NE09 1264 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 WASF1Q92558 559 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 SPZ1Q9BXG8 430 aa14.14□□□□□ -0.15
HERC1-205ENST00000559886 V9GY48 417 aaPredicted RBP14.14□□□□□ -0.15
HERC1-205ENST00000559886 CYTH3O43739 400 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms