RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 FAM227BQ96M60 508 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 KANSL2Q9H9L4 492 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 TXNRD2Q9NNW7 524 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 HELLSQ9NRZ9 838 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 DIAPH3Q9NSV4 1193 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 MORF4L1Q9UBU8 362 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 TMX2Q9Y320 296 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 DOCK3Q8IZD9 2030 aa9.76□□□□□ -0.85
SNX1-207ENST00000559401 A0A0D9SFI3 127 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 FLOT1O75955 427 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 CCNA1P78396 465 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 PPARAQ07869 468 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 MCMDC2Q4G0Z9 681 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 LPAR1Q92633 364 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 VCPKMTQ9H867 229 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 GOPCQ9HD26 462 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 TOMM22Q9NS69 142 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 RBPJLQ9UBG7 517 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 ISY1Q9ULR0 285 aaKnown RBP9.75□□□□□ -0.85
SNX1-207ENST00000559401 PLXNB2O15031 1838 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 PARP14Q460N5 1801 aa9.75□□□□□ -0.85
SNX1-207ENST00000559401 A0A0G2JMZ2 1700 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 SPDYE16A6NNV3 312 aaPredicted RBP9.74□□□□□ -0.85
SNX1-207ENST00000559401 WDR46O15213 610 aaKnown RBP9.74□□□□□ -0.85
SNX1-207ENST00000559401 TSPY3P0CV98 308 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 TSPY8P0CW00 308 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 EN2P19622 333 aaPredicted RBP9.74□□□□□ -0.85
SNX1-207ENST00000559401 CYP2B6P20813 491 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 MAPK4P31152 587 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 MFAP1P55081 439 aaKnown RBP9.74□□□□□ -0.85
SNX1-207ENST00000559401 CTDSPL2Q05D32 466 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 IRF5Q13568 498 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 PLS1Q14651 629 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 COG2Q14746 738 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 MTFR1Q15390 333 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 KIAA1755Q5JYT7 1200 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 VPS53Q5VIR6 699 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 PORCNQ9H237 461 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 OSBPL3Q9H4L5 887 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 RABGAP1Q9Y3P9 1069 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 COL11A1P12107 1806 aaPredicted RBP9.74□□□□□ -0.85
SNX1-207ENST00000559401 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
SNX1-207ENST00000559401 KIAA0100Q14667 2235 aaKnown RBP9.73□□□□□ -0.85
SNX1-207ENST00000559401 TSPY2A6NKD2 308 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 HIP1O00291 1037 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 INHAP05111 366 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 CCL5P13501 91 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 SDSP20132 328 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 TFAP4Q01664 338 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 Q3C1V9 767 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 FAM47AQ5JRC9 791 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 RRP12Q5JTH9 1297 aaKnown RBP9.73□□□□□ -0.85
SNX1-207ENST00000559401 FAM83BQ5T0W9 1011 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 CWC27Q6UX04 472 aaKnown RBP9.73□□□□□ -0.85
SNX1-207ENST00000559401 PLEKHH3Q7Z736 793 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 ZNF589Q86UQ0 364 aaPredicted RBP9.73□□□□□ -0.85
SNX1-207ENST00000559401 SIAH1Q8IUQ4 282 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 SOCS4Q8WXH5 440 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 ATG4CQ96DT6 458 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 NUDT12Q9BQG2 462 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 RNF208Q9H0X6 261 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 HOXC10Q9NYD6 342 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 BTBD7Q9P203 1132 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 CLIP2Q9UDT6 1046 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 IVNS1ABPQ9Y6Y0 642 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 RLFQ13129 1914 aa9.73□□□□□ -0.85
SNX1-207ENST00000559401 FOXP2O15409 715 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 RANBP6O60518 1105 aaKnown RBP9.72□□□□□ -0.85
SNX1-207ENST00000559401 CNMDO75829 334 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 HMGCRP04035 888 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 HSPD1P10809 573 aaKnown RBP9.72□□□□□ -0.85
SNX1-207ENST00000559401 PDE4AP27815 886 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 HAND2P61296 217 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 GPR142Q7Z601 462 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 TICAM2Q86XR7 235 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 LRRC47Q8N1G4 583 aaKnown RBP9.72□□□□□ -0.85
SNX1-207ENST00000559401 PXYLP1Q8TE99 480 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 CHMP4CQ96CF2 233 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 CEP95Q96GE4 821 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 NUP88Q99567 741 aaPredicted RBP9.72□□□□□ -0.85
SNX1-207ENST00000559401 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.72□□□□□ -0.85
SNX1-207ENST00000559401 UNC93B1Q9H1C4 597 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 NYAP2Q9P242 653 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
SNX1-207ENST00000559401 TTLL1O95922 423 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 NDUFB10O96000 172 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 ZKSCAN1P17029 563 aaPredicted RBP9.71□□□□□ -0.86
SNX1-207ENST00000559401 DSG3P32926 999 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 RGS2P41220 211 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 TTC22Q5TAA0 569 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 POTEEQ6S8J3 1075 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 LBX2Q6XYB7 198 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 NCAPG2Q86XI2 1143 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 MB21D1Q8N884 522 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 NEDD1Q8NHV4 660 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 NKX2-3Q8TAU0 364 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 INCENPQ9NQS7 918 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 FBXO28Q9NVF7 368 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 MTMR4Q9NYA4 1195 aa9.71□□□□□ -0.86
SNX1-207ENST00000559401 GJD2Q9UKL4 321 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms