RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 AKR1B1P15121 316 aa17.97■□□□□ 0.47
LRRC28-213ENST00000559399 MNX1P50219 401 aaPredicted RBP17.97■□□□□ 0.47
LRRC28-213ENST00000559399 COG2Q14746 738 aa17.97■□□□□ 0.47
LRRC28-213ENST00000559399 GPATCH3Q96I76 525 aa17.97■□□□□ 0.47
LRRC28-213ENST00000559399 PRO3102Q9H379 93 aa17.97■□□□□ 0.47
LRRC28-213ENST00000559399 C11orf49Q9H6J7 331 aa17.97■□□□□ 0.47
LRRC28-213ENST00000559399 HOXC10Q9NYD6 342 aa17.97■□□□□ 0.47
LRRC28-213ENST00000559399 NAV1Q8NEY1 1877 aa17.97■□□□□ 0.47
LRRC28-213ENST00000559399 CCND3P30281 292 aaPredicted RBP17.96■□□□□ 0.47
LRRC28-213ENST00000559399 CDK8P49336 464 aa17.96■□□□□ 0.47
LRRC28-213ENST00000559399 GRB14Q14449 540 aa17.96■□□□□ 0.47
LRRC28-213ENST00000559399 MFSD14CQ5VZR4 134 aa17.96■□□□□ 0.47
LRRC28-213ENST00000559399 C16orf86Q6ZW13 317 aa17.96■□□□□ 0.47
LRRC28-213ENST00000559399 CLEC10AQ8IUN9 316 aa17.96■□□□□ 0.47
LRRC28-213ENST00000559399 PUS7LQ9H0K6 701 aaKnown RBP17.96■□□□□ 0.47
LRRC28-213ENST00000559399 TMX2Q9Y320 296 aa17.96■□□□□ 0.47
LRRC28-213ENST00000559399 MYH1P12882 1939 aa17.96■□□□□ 0.47
LRRC28-213ENST00000559399 HOXC6P09630 235 aa17.95■□□□□ 0.46
LRRC28-213ENST00000559399 SIAH1Q8IUQ4 282 aa17.95■□□□□ 0.46
LRRC28-213ENST00000559399 MOV10L1Q9BXT6 1211 aaKnown RBP17.95■□□□□ 0.46
LRRC28-213ENST00000559399 DCTPP1Q9H773 170 aa17.95■□□□□ 0.46
LRRC28-213ENST00000559399 ARPP21Q9UBL0 812 aaPredicted RBP17.95■□□□□ 0.46
LRRC28-213ENST00000559399 SMIM22K7EJ46 135 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 KIAA1755Q5JYT7 1200 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 CTR9Q6PD62 1173 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 C7orf61Q8IZ16 206 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 SPICE1Q8N0Z3 855 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 MB21D1Q8N884 522 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 KBTBD3Q8NAB2 608 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 SPATC1LQ9H0A9 340 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 VCPKMTQ9H867 229 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 FLRT1Q9NZU1 646 aa17.94■□□□□ 0.46
LRRC28-213ENST00000559399 A0A1W2PPC1 479 aa17.93■□□□□ 0.46
LRRC28-213ENST00000559399 WDR46O15213 610 aaKnown RBP17.93■□□□□ 0.46
LRRC28-213ENST00000559399 FLOT1O75955 427 aa17.93■□□□□ 0.46
LRRC28-213ENST00000559399 DSG3P32926 999 aa17.93■□□□□ 0.46
LRRC28-213ENST00000559399 ATP2B2Q01814 1243 aa17.93■□□□□ 0.46
LRRC28-213ENST00000559399 LHX8Q68G74 356 aa17.93■□□□□ 0.46
LRRC28-213ENST00000559399 SHCBP1Q8NEM2 672 aa17.93■□□□□ 0.46
LRRC28-213ENST00000559399 KANSL2Q9H9L4 492 aa17.93■□□□□ 0.46
LRRC28-213ENST00000559399 PLXNB2O15031 1838 aa17.93■□□□□ 0.46
LRRC28-213ENST00000559399 RANBP2P49792 3224 aaKnown RBP17.92■□□□□ 0.46
LRRC28-213ENST00000559399 STRNO43815 780 aa17.92■□□□□ 0.46
LRRC28-213ENST00000559399 ERCC3P19447 782 aa17.92■□□□□ 0.46
LRRC28-213ENST00000559399 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
LRRC28-213ENST00000559399 NPLOC4Q8TAT6 608 aa17.92■□□□□ 0.46
LRRC28-213ENST00000559399 APPBP2Q92624 585 aa17.92■□□□□ 0.46
LRRC28-213ENST00000559399 STRBPQ96SI9 672 aaKnown RBP17.92■□□□□ 0.46
LRRC28-213ENST00000559399 PFASO15067 1338 aa17.92■□□□□ 0.46
LRRC28-213ENST00000559399 MSCO60682 206 aa17.91■□□□□ 0.46
LRRC28-213ENST00000559399 COL6A1P12109 1028 aa17.91■□□□□ 0.46
LRRC28-213ENST00000559399 EEF2P13639 858 aaKnown RBP17.91■□□□□ 0.46
LRRC28-213ENST00000559399 ADORA2AP29274 412 aa17.91■□□□□ 0.46
LRRC28-213ENST00000559399 CYP2C19P33261 490 aa17.91■□□□□ 0.46
LRRC28-213ENST00000559399 PLS1Q14651 629 aa17.91■□□□□ 0.46
LRRC28-213ENST00000559399 DPP9Q86TI2 863 aa17.91■□□□□ 0.46
LRRC28-213ENST00000559399 ATG4CQ96DT6 458 aa17.91■□□□□ 0.46
LRRC28-213ENST00000559399 MROH8Q9H579 483 aa17.91■□□□□ 0.46
LRRC28-213ENST00000559399 STAP2Q9UGK3 403 aa17.91■□□□□ 0.46
LRRC28-213ENST00000559399 DDX20Q9UHI6 824 aaKnown RBP17.91■□□□□ 0.46
LRRC28-213ENST00000559399 ZMYND8Q9ULU4 1186 aaPredicted RBP17.91■□□□□ 0.46
LRRC28-213ENST00000559399 ZFYP08048 801 aaPredicted RBP17.9■□□□□ 0.46
LRRC28-213ENST00000559399 SBK1Q52WX2 424 aa17.9■□□□□ 0.46
LRRC28-213ENST00000559399 OLFML2BQ68BL8 750 aa17.9■□□□□ 0.46
LRRC28-213ENST00000559399 GIMAP6Q6P9H5 292 aa17.9■□□□□ 0.46
LRRC28-213ENST00000559399 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
LRRC28-213ENST00000559399 GOPCQ9HD26 462 aa17.9■□□□□ 0.46
LRRC28-213ENST00000559399 CEP290O15078 2479 aa17.9■□□□□ 0.46
LRRC28-213ENST00000559399 GSG1L2A8MUP6 293 aa17.89■□□□□ 0.45
LRRC28-213ENST00000559399 RNF113AO15541 343 aaKnown RBP17.89■□□□□ 0.45
LRRC28-213ENST00000559399 CNGA1P29973 690 aa17.89■□□□□ 0.45
LRRC28-213ENST00000559399 LRRFIP1Q32MZ4 808 aaKnown RBP17.89■□□□□ 0.45
LRRC28-213ENST00000559399 NCAPG2Q86XI2 1143 aa17.89■□□□□ 0.45
LRRC28-213ENST00000559399 ABRAQ8N0Z2 381 aa17.89■□□□□ 0.45
LRRC28-213ENST00000559399 OSBP2Q969R2 916 aa17.89■□□□□ 0.45
LRRC28-213ENST00000559399 GDF15Q99988 308 aa17.89■□□□□ 0.45
LRRC28-213ENST00000559399 SLC5A4Q9NY91 659 aa17.89■□□□□ 0.45
LRRC28-213ENST00000559399 ROBO3Q96MS0 1386 aa17.89■□□□□ 0.45
LRRC28-213ENST00000559399 DOCK3Q8IZD9 2030 aa17.88■□□□□ 0.45
LRRC28-213ENST00000559399 GPAA1O43292 621 aa17.88■□□□□ 0.45
LRRC28-213ENST00000559399 RAD21O60216 631 aa17.88■□□□□ 0.45
LRRC28-213ENST00000559399 IGHA2P01877 340 aa17.88■□□□□ 0.45
LRRC28-213ENST00000559399 CYBAP13498 195 aa17.88■□□□□ 0.45
LRRC28-213ENST00000559399 GNAT2P19087 354 aa17.88■□□□□ 0.45
LRRC28-213ENST00000559399 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.88■□□□□ 0.45
LRRC28-213ENST00000559399 MKNK2Q9HBH9 465 aa17.88■□□□□ 0.45
LRRC28-213ENST00000559399 TTC41PQ6P2S7 1318 aa17.88■□□□□ 0.45
LRRC28-213ENST00000559399 MINDY4BA8MYZ0 360 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 COBLO75128 1261 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 SLC25A27O95847 323 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 SYN1P17600 705 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 RASA1P20936 1047 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 BMP8BP34820 402 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 TDO2P48775 406 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 TMEM132BQ14DG7 1078 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 TRPV1Q8NER1 839 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 FBXO28Q9NVF7 368 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 ADAMTS5Q9UNA0 930 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 PCDHB15Q9Y5E8 787 aa17.87■□□□□ 0.45
LRRC28-213ENST00000559399 TRIOBPQ9H2D6 2365 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms