RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 POSTNQ15063 836 aa12.9□□□□□ -0.34
CLPX-204ENST00000559152 TTC38Q5R3I4 469 aa12.9□□□□□ -0.34
CLPX-204ENST00000559152 NT5DC1Q5TFE4 455 aa12.9□□□□□ -0.34
CLPX-204ENST00000559152 CCDC148Q8NFR7 591 aa12.9□□□□□ -0.34
CLPX-204ENST00000559152 DYNLL2Q96FJ2 89 aa12.9□□□□□ -0.34
CLPX-204ENST00000559152 PRIMPOLQ96LW4 560 aa12.9□□□□□ -0.34
CLPX-204ENST00000559152 SMC2O95347 1197 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
CLPX-204ENST00000559152 CT47A1Q5JQC4 288 aaPredicted RBP12.89□□□□□ -0.35
CLPX-204ENST00000559152 PROM2Q8N271 834 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 MLKLQ8NB16 471 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 SMARCE1Q969G3 411 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 SHISA4Q96DD7 197 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 ZC3H12CQ9C0D7 883 aaKnown RBP12.89□□□□□ -0.35
CLPX-204ENST00000559152 CSRNP2Q9H175 543 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 PCDHA5Q9Y5H7 936 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 A0A087WWV3 80 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 hCG_1642624A0A1W2PR95 340 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 CBFA2T2O43439 604 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 RASA1P20936 1047 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 PLCD1P51178 756 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 NEDD1Q8NHV4 660 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 NRBP1Q9UHY1 535 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 PYCARDQ9ULZ3 195 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 FLT1P17948 1338 aa12.89□□□□□ -0.35
CLPX-204ENST00000559152 SRGNP10124 158 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 SMARCA1P28370 1054 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 CDK8P49336 464 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
CLPX-204ENST00000559152 NCAPHQ15003 741 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 NPY5RQ15761 445 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 LRRC8AQ8IWT6 810 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 EYA3Q99504 573 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 SAP30BPQ9UHR5 308 aaKnown RBP12.88□□□□□ -0.35
CLPX-204ENST00000559152 PCDHA4Q9UN74 947 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 MYH6P13533 1939 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 RHBDL3P58872 404 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 SLC4A8Q2Y0W8 1093 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 BLIDQ8IZY5 108 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 CCDC12Q8WUD4 166 aaPredicted RBP12.88□□□□□ -0.35
CLPX-204ENST00000559152 TMEM47Q9BQJ4 181 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
CLPX-204ENST00000559152 SERTAD1Q9UHV2 236 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 MAD2L2Q9UI95 211 aa12.88□□□□□ -0.35
CLPX-204ENST00000559152 NAV1Q8NEY1 1877 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 LRRC37AA6NMS7 1700 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 PALM3A6NDB9 673 aaPredicted RBP12.87□□□□□ -0.35
CLPX-204ENST00000559152 SOCS7O14512 581 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 NRDCO43847 1150 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
CLPX-204ENST00000559152 GTF2IP78347 998 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 GRIN1Q05586 938 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 ARL6IP4Q66PJ3 421 aaKnown RBP12.87□□□□□ -0.35
CLPX-204ENST00000559152 PIK3AP1Q6ZUJ8 805 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 SLC51AQ86UW1 340 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 DAGLBQ8NCG7 672 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 PARP3Q9Y6F1 533 aa12.87□□□□□ -0.35
CLPX-204ENST00000559152 ACTN4O43707 911 aaKnown RBP12.86□□□□□ -0.35
CLPX-204ENST00000559152 SLFN14P0C7P3 912 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
CLPX-204ENST00000559152 ZNF174Q15697 407 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
CLPX-204ENST00000559152 FOXP4Q8IVH2 680 aaPredicted RBP12.86□□□□□ -0.35
CLPX-204ENST00000559152 CCDC150Q8NCX0 1101 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 CACTINQ8WUQ7 758 aaKnown RBP12.86□□□□□ -0.35
CLPX-204ENST00000559152 SPZ1Q9BXG8 430 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 PARP1P09874 1014 aaKnown RBP12.86□□□□□ -0.35
CLPX-204ENST00000559152 PTGDRQ13258 359 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 CCDC144BQ3MJ40 725 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 ISM2Q6H9L7 571 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
CLPX-204ENST00000559152 SPATA20Q8TB22 786 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 XPO4Q9C0E2 1151 aaKnown RBP12.86□□□□□ -0.35
CLPX-204ENST00000559152 IFNKQ9P0W0 207 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.86□□□□□ -0.35
CLPX-204ENST00000559152 MAN1B1Q9UKM7 699 aa12.86□□□□□ -0.35
CLPX-204ENST00000559152 FAM205CA6NFA0 338 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 G3V3G9 751 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 NOVP48745 357 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 FANCCQ00597 558 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 MORC3Q14149 939 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 DCAF8Q5TAQ9 597 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 FILIP1Q7Z7B0 1213 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 COL23A1Q86Y22 540 aaPredicted RBP12.85□□□□□ -0.35
CLPX-204ENST00000559152 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 DAGLAQ9Y4D2 1042 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 CCDC194A0A1B0GVG4 234 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 APBA3O96018 575 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
CLPX-204ENST00000559152 LONP1P36776 959 aaKnown RBP12.85□□□□□ -0.35
CLPX-204ENST00000559152 TXLNAP40222 546 aa12.85□□□□□ -0.35
CLPX-204ENST00000559152 LRMPQ12912 555 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms