RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 SH2D4AQ9H788 454 aa13.43□□□□□ -0.26
BMP4-204ENST00000558961 KANSL2Q9H9L4 492 aa13.43□□□□□ -0.26
BMP4-204ENST00000558961 ARHGEF10LQ9HCE6 1279 aa13.43□□□□□ -0.26
BMP4-204ENST00000558961 RABGAP1Q9Y3P9 1069 aa13.43□□□□□ -0.26
BMP4-204ENST00000558961 SPDYE16A6NNV3 312 aaPredicted RBP13.42□□□□□ -0.26
BMP4-204ENST00000558961 TDO2P48775 406 aa13.42□□□□□ -0.26
BMP4-204ENST00000558961 KIAA1755Q5JYT7 1200 aa13.42□□□□□ -0.26
BMP4-204ENST00000558961 NACAP1Q9BZK3 213 aa13.42□□□□□ -0.26
BMP4-204ENST00000558961 VCPKMTQ9H867 229 aa13.42□□□□□ -0.26
BMP4-204ENST00000558961 HELLSQ9NRZ9 838 aa13.42□□□□□ -0.26
BMP4-204ENST00000558961 GJD2Q9UKL4 321 aa13.42□□□□□ -0.26
BMP4-204ENST00000558961 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
BMP4-204ENST00000558961 IGKV6D-41A0A0C4DH26 115 aa13.41□□□□□ -0.26
BMP4-204ENST00000558961 ADCY3O60266 1144 aa13.41□□□□□ -0.26
BMP4-204ENST00000558961 CNMDO75829 334 aa13.41□□□□□ -0.26
BMP4-204ENST00000558961 MAPK4P31152 587 aa13.41□□□□□ -0.26
BMP4-204ENST00000558961 SOCS4Q8WXH5 440 aa13.41□□□□□ -0.26
BMP4-204ENST00000558961 TMEM106CQ9BVX2 250 aa13.41□□□□□ -0.26
BMP4-204ENST00000558961 ZNF287Q9HBT7 754 aa13.41□□□□□ -0.26
BMP4-204ENST00000558961 A0A0D9SFI3 127 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 MINDY4BA8MYZ0 360 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 WDR46O15213 610 aaKnown RBP13.4□□□□□ -0.26
BMP4-204ENST00000558961 PEX10O60683 326 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 EEF2P13639 858 aaKnown RBP13.4□□□□□ -0.26
BMP4-204ENST00000558961 MTFR1Q15390 333 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 Q3C1V9 767 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 CCDC129Q6ZRS4 1044 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 NAPBQ9H115 298 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 PORCNQ9H237 461 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 NYAP2Q9P242 653 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 SYNPO2Q9UMS6 1093 aa13.4□□□□□ -0.26
BMP4-204ENST00000558961 FRMPD3Q5JV73 1810 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 APPP05067 770 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 XRCC5P13010 732 aaKnown RBP13.39□□□□□ -0.27
BMP4-204ENST00000558961 ELNP15502 786 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 EN2P19622 333 aaPredicted RBP13.39□□□□□ -0.27
BMP4-204ENST00000558961 UBXN2AP68543 259 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 PPARAQ07869 468 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 COG2Q14746 738 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 ALX1Q15699 326 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 VPS53Q5VIR6 699 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 GPR142Q7Z601 462 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 USP6NLQ92738 828 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 SHISA4Q96DD7 197 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 FAM227BQ96M60 508 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 PAGR1Q9BTK6 254 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 MKNK2Q9HBH9 465 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 BTBD7Q9P203 1132 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 ANAPC4Q9UJX5 808 aa13.39□□□□□ -0.27
BMP4-204ENST00000558961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
BMP4-204ENST00000558961 MKI67P46013 3256 aaKnown RBP13.39□□□□□ -0.27
BMP4-204ENST00000558961 PDE4DIPQ5VU43 2346 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 INHAP05111 366 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 GJB1P08034 283 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 CCL5P13501 91 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 CCNA1P78396 465 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 PDE4BQ07343 736 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 MCMDC2Q4G0Z9 681 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 MORN1Q5T089 497 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 MB21D1Q8N884 522 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 NUDT12Q9BQG2 462 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 GOPCQ9HD26 462 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 HOXC10Q9NYD6 342 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
BMP4-204ENST00000558961 HMGCRP04035 888 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 SLC3A2P08195 630 aaKnown RBP13.37□□□□□ -0.27
BMP4-204ENST00000558961 FGRP09769 529 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 CAPN2P17655 700 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 DSG3P32926 999 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 GJA8P48165 433 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 NMIQ13287 307 aaPredicted RBP13.37□□□□□ -0.27
BMP4-204ENST00000558961 ZNF589Q86UQ0 364 aaPredicted RBP13.37□□□□□ -0.27
BMP4-204ENST00000558961 SPICE1Q8N0Z3 855 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 NKX2-3Q8TAU0 364 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 MKL1Q969V6 931 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 PAK6Q9NQU5 681 aaPredicted RBP13.37□□□□□ -0.27
BMP4-204ENST00000558961 MTMR4Q9NYA4 1195 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 CCDC171Q6TFL3 1326 aa13.37□□□□□ -0.27
BMP4-204ENST00000558961 TRIM6-TRIM34B2RNG4 842 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 PRDM1O75626 825 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 FLOT1O75955 427 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 HSPD1P10809 573 aaKnown RBP13.36□□□□□ -0.27
BMP4-204ENST00000558961 SDSP20132 328 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 PDE4AP27815 886 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 MAP3K21Q5TCX8 1036 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 PLEKHH3Q7Z736 793 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 UBE2Q1Q7Z7E8 422 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 TRMT44Q8IYL2 757 aaKnown RBP13.36□□□□□ -0.27
BMP4-204ENST00000558961 ZNF444Q8N0Y2 327 aaPredicted RBP13.36□□□□□ -0.27
BMP4-204ENST00000558961 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 SHCBP1Q8NEM2 672 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 NEDD1Q8NHV4 660 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 TRIB2Q92519 343 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 CEP95Q96GE4 821 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 APBA2Q99767 749 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 UNC93B1Q9H1C4 597 aa13.36□□□□□ -0.27
BMP4-204ENST00000558961 ORC4O43929 436 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 MYCP01106 439 aaPredicted RBP13.35□□□□□ -0.27
BMP4-204ENST00000558961 HOXC6P09630 235 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms