RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 HOXC10Q9NYD6 342 aa25.65■■□□□ 1.7
CRNDE-205ENST00000558952 GJD2Q9UKL4 321 aa25.65■■□□□ 1.7
CRNDE-205ENST00000558952 CENPFP49454 3210 aa25.64■■□□□ 1.7
CRNDE-205ENST00000558952 SPDYE16A6NNV3 312 aaPredicted RBP25.64■■□□□ 1.7
CRNDE-205ENST00000558952 GJB1P08034 283 aa25.64■■□□□ 1.7
CRNDE-205ENST00000558952 EEF2P13639 858 aaKnown RBP25.64■■□□□ 1.7
CRNDE-205ENST00000558952 COG2Q14746 738 aa25.64■■□□□ 1.7
CRNDE-205ENST00000558952 NAPBQ9H115 298 aa25.64■■□□□ 1.7
CRNDE-205ENST00000558952 PORCNQ9H237 461 aa25.64■■□□□ 1.7
CRNDE-205ENST00000558952 VCPKMTQ9H867 229 aa25.64■■□□□ 1.7
CRNDE-205ENST00000558952 IGHDP01880 384 aa25.63■■□□□ 1.69
CRNDE-205ENST00000558952 SLC3A2P08195 630 aaKnown RBP25.63■■□□□ 1.69
CRNDE-205ENST00000558952 GPR142Q7Z601 462 aa25.63■■□□□ 1.69
CRNDE-205ENST00000558952 PLEKHH3Q7Z736 793 aa25.63■■□□□ 1.69
CRNDE-205ENST00000558952 CHD1LQ86WJ1 897 aa25.63■■□□□ 1.69
CRNDE-205ENST00000558952 SIAH1Q8IUQ4 282 aa25.63■■□□□ 1.69
CRNDE-205ENST00000558952 SPICE1Q8N0Z3 855 aa25.63■■□□□ 1.69
CRNDE-205ENST00000558952 UNC93B1Q9H1C4 597 aa25.63■■□□□ 1.69
CRNDE-205ENST00000558952 GOPCQ9HD26 462 aa25.63■■□□□ 1.69
CRNDE-205ENST00000558952 CNMDO75829 334 aa25.62■■□□□ 1.69
CRNDE-205ENST00000558952 HMGCRP04035 888 aa25.62■■□□□ 1.69
CRNDE-205ENST00000558952 CYP2B6P20813 491 aa25.62■■□□□ 1.69
CRNDE-205ENST00000558952 RASA1P20936 1047 aa25.62■■□□□ 1.69
CRNDE-205ENST00000558952 WDR78Q5VTH9 848 aa25.62■■□□□ 1.69
CRNDE-205ENST00000558952 POTEEQ6S8J3 1075 aa25.62■■□□□ 1.69
CRNDE-205ENST00000558952 ZNF444Q8N0Y2 327 aaPredicted RBP25.62■■□□□ 1.69
CRNDE-205ENST00000558952 TRIM6-TRIM34B2RNG4 842 aa25.61■■□□□ 1.69
CRNDE-205ENST00000558952 WDR46O15213 610 aaKnown RBP25.61■■□□□ 1.69
CRNDE-205ENST00000558952 RAD21O60216 631 aa25.61■■□□□ 1.69
CRNDE-205ENST00000558952 GJA8P48165 433 aa25.61■■□□□ 1.69
CRNDE-205ENST00000558952 NUCB1Q02818 461 aa25.61■■□□□ 1.69
CRNDE-205ENST00000558952 FLOT1O75955 427 aa25.6■■□□□ 1.69
CRNDE-205ENST00000558952 RGS2P41220 211 aa25.6■■□□□ 1.69
CRNDE-205ENST00000558952 PDE4BQ07343 736 aa25.6■■□□□ 1.69
CRNDE-205ENST00000558952 KIAA1755Q5JYT7 1200 aa25.6■■□□□ 1.69
CRNDE-205ENST00000558952 PRPF38BQ5VTL8 546 aaKnown RBP25.6■■□□□ 1.69
CRNDE-205ENST00000558952 TICAM2Q86XR7 235 aa25.6■■□□□ 1.69
CRNDE-205ENST00000558952 HELLSQ9NRZ9 838 aa25.6■■□□□ 1.69
CRNDE-205ENST00000558952 BTBD7Q9P203 1132 aa25.6■■□□□ 1.69
CRNDE-205ENST00000558952 KIAA0100Q14667 2235 aaKnown RBP25.59■■□□□ 1.69
CRNDE-205ENST00000558952 XRCC5P13010 732 aaKnown RBP25.59■■□□□ 1.69
CRNDE-205ENST00000558952 CCDC129Q6ZRS4 1044 aa25.59■■□□□ 1.69
CRNDE-205ENST00000558952 TRMT44Q8IYL2 757 aaKnown RBP25.59■■□□□ 1.69
CRNDE-205ENST00000558952 MB21D1Q8N884 522 aa25.59■■□□□ 1.69
CRNDE-205ENST00000558952 U2AF1L4Q8WU68 220 aaKnown RBP25.59■■□□□ 1.69
CRNDE-205ENST00000558952 RILPL2Q969X0 211 aa25.59■■□□□ 1.69
CRNDE-205ENST00000558952 IVNS1ABPQ9Y6Y0 642 aa25.59■■□□□ 1.69
CRNDE-205ENST00000558952 TNRC18O15417 2968 aaPredicted RBP25.59■■□□□ 1.69
CRNDE-205ENST00000558952 PRDM1O75626 825 aa25.58■■□□□ 1.69
CRNDE-205ENST00000558952 PPARAQ07869 468 aa25.58■■□□□ 1.69
CRNDE-205ENST00000558952 SAMD1Q6SPF0 538 aaPredicted RBP25.58■■□□□ 1.69
CRNDE-205ENST00000558952 SHISA4Q96DD7 197 aa25.58■■□□□ 1.69
CRNDE-205ENST00000558952 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.58■■□□□ 1.69
CRNDE-205ENST00000558952 SGPL1O95470 568 aa25.57■■□□□ 1.68
CRNDE-205ENST00000558952 CAPN2P17655 700 aa25.57■■□□□ 1.68
CRNDE-205ENST00000558952 DSG3P32926 999 aa25.57■■□□□ 1.68
CRNDE-205ENST00000558952 MORN1Q5T089 497 aa25.57■■□□□ 1.68
CRNDE-205ENST00000558952 NYAP2Q9P242 653 aa25.57■■□□□ 1.68
CRNDE-205ENST00000558952 DOCK3Q8IZD9 2030 aa25.56■■□□□ 1.68
CRNDE-205ENST00000558952 ZKSCAN1P17029 563 aaPredicted RBP25.56■■□□□ 1.68
CRNDE-205ENST00000558952 TRIB2Q92519 343 aa25.56■■□□□ 1.68
CRNDE-205ENST00000558952 DEFB118Q96PH6 123 aa25.56■■□□□ 1.68
CRNDE-205ENST00000558952 APBA2Q99767 749 aa25.56■■□□□ 1.68
CRNDE-205ENST00000558952 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.56■■□□□ 1.68
CRNDE-205ENST00000558952 PLXNB2O15031 1838 aa25.56■■□□□ 1.68
CRNDE-205ENST00000558952 TSPY3P0CV98 308 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 TSPY8P0CW00 308 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 MAP2K5Q13163 448 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 PLS1Q14651 629 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 MCMDC2Q4G0Z9 681 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 PLEKHM2Q8IWE5 1019 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 USP6NLQ92738 828 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 ATG4CQ96DT6 458 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 SPATC1LQ9H0A9 340 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 HMX1Q9NP08 348 aaPredicted RBP25.55■■□□□ 1.68
CRNDE-205ENST00000558952 PAK6Q9NQU5 681 aaPredicted RBP25.55■■□□□ 1.68
CRNDE-205ENST00000558952 RPTORQ8N122 1335 aa25.55■■□□□ 1.68
CRNDE-205ENST00000558952 BRCA2P51587 3418 aa25.54■■□□□ 1.68
CRNDE-205ENST00000558952 SLC15A5A6NIM6 579 aa25.54■■□□□ 1.68
CRNDE-205ENST00000558952 TFRCP02786 760 aaKnown RBP25.54■■□□□ 1.68
CRNDE-205ENST00000558952 PTPREP23469 700 aa25.54■■□□□ 1.68
CRNDE-205ENST00000558952 FAM227BQ96M60 508 aa25.54■■□□□ 1.68
CRNDE-205ENST00000558952 MOV10L1Q9BXT6 1211 aaKnown RBP25.54■■□□□ 1.68
CRNDE-205ENST00000558952 OSBPL3Q9H4L5 887 aa25.54■■□□□ 1.68
CRNDE-205ENST00000558952 CLIP2Q9UDT6 1046 aa25.54■■□□□ 1.68
CRNDE-205ENST00000558952 GREB1LQ9C091 1923 aaPredicted RBP25.54■■□□□ 1.68
CRNDE-205ENST00000558952 A0A0D9SFI3 127 aa25.53■■□□□ 1.68
CRNDE-205ENST00000558952 IRX6P78412 446 aaPredicted RBP25.53■■□□□ 1.68
CRNDE-205ENST00000558952 TRIM32Q13049 653 aa25.53■■□□□ 1.68
CRNDE-205ENST00000558952 FAM83BQ5T0W9 1011 aa25.53■■□□□ 1.68
CRNDE-205ENST00000558952 SHCBP1Q8NEM2 672 aa25.53■■□□□ 1.68
CRNDE-205ENST00000558952 A0A0G2JMZ2 1700 aa25.52■■□□□ 1.68
CRNDE-205ENST00000558952 IGKV6D-41A0A0C4DH26 115 aa25.52■■□□□ 1.68
CRNDE-205ENST00000558952 TTLL1O95922 423 aa25.52■■□□□ 1.68
CRNDE-205ENST00000558952 NMIQ13287 307 aaPredicted RBP25.52■■□□□ 1.68
CRNDE-205ENST00000558952 VPS53Q5VIR6 699 aa25.52■■□□□ 1.68
CRNDE-205ENST00000558952 NEDD1Q8NHV4 660 aa25.52■■□□□ 1.68
CRNDE-205ENST00000558952 CEP95Q96GE4 821 aa25.52■■□□□ 1.68
CRNDE-205ENST00000558952 MTMR4Q9NYA4 1195 aa25.52■■□□□ 1.68
CRNDE-205ENST00000558952 F5H6K3 240 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms