RNA–Protein interactions for RNA: ENST00000558616.1

AC023908.2-201, humanhuman

TSL 3 BASIC

Gene AC023908.2, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023908.2-201ENST00000558616 CALM1P0DP23 149 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 CALM2P0DP24 149 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 CALM3P0DP25 149 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 GJB2P29033 226 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 FOSBP53539 338 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 TROAPQ12815 778 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 ZYXQ15942 572 aaKnown RBP8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 CCDC96Q2M329 555 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 PPP4R3BQ5MIZ7 849 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 CPLX2Q6PUV4 134 aaKnown RBP8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 MOB2Q70IA6 237 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 SIAH1Q8IUQ4 282 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 FANCBQ8NB91 859 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 NSUN7Q8NE18 718 aaKnown RBP8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 ACER1Q8TDN7 264 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 KLRG1Q96E93 195 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 INTS4Q96HW7 963 aaKnown RBP8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 FEZ1Q99689 392 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 ARHGEF10LQ9HCE6 1279 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 PICK1Q9NRD5 415 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 NYAP2Q9P242 653 aa8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 FRMPD2Q68DX3 1309 aaPredicted RBP8.54□□□□□ -1.04
AC023908.2-201ENST00000558616 GREB1LQ9C091 1923 aaPredicted RBP8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 CCDC196A0A1B0GTZ2 297 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 A0A1W2PRG0 241 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 PTPDC1A2A3K4 754 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 USP17L5A8MUK1 530 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 PLEKHA8P1O95397 391 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 CTDNEP1O95476 244 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 PARP1P09874 1014 aaKnown RBP8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 GOLGA8HP0CJ92 632 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 KIF5BP33176 963 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 ECE1P42892 770 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 IREB2P48200 963 aaKnown RBP8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 NOVP48745 357 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 GRM4Q14833 912 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 SLFN13Q68D06 897 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 USP17L2Q6R6M4 530 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 SCYL3Q8IZE3 742 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 STAG2Q8N3U4 1231 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 FAM184AQ8NB25 1140 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 PIBF1Q8WXW3 757 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 PHKBQ93100 1093 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 RBM28Q9NW13 759 aaKnown RBP8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 ZNF112Q9UJU3 913 aa8.53□□□□□ -1.04
AC023908.2-201ENST00000558616 UTRNP46939 3433 aa8.52□□□□□ -1.04
AC023908.2-201ENST00000558616 hCG_1642624A0A1W2PR95 340 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 F5H6K3 240 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 UBE2Q2LH0YL09 131 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 CDKL5O76039 1030 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 PDHBP11177 359 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 RCAN1P53805 252 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 KLRC3Q07444 240 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 SSRP1Q08945 709 aaKnown RBP8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 FOXD4L5Q5VV16 416 aaPredicted RBP8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 TMTC3Q6ZXV5 915 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 KCTD1Q719H9 257 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 ARMC9Q7Z3E5 817 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 SPICE1Q8N0Z3 855 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 FOXD4L4Q8WXT5 416 aaPredicted RBP8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 MKL1Q969V6 931 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 NUP88Q99567 741 aaPredicted RBP8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 LLPHQ9BRT6 129 aaKnown RBP8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 SLC26A6Q9BXS9 759 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 CPVLQ9H3G5 476 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 SH2D4AQ9H788 454 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 ELP3Q9H9T3 547 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 CWC22Q9HCG8 908 aaKnown RBP8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 VAT1LQ9HCJ6 419 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 ORC3Q9UBD5 711 aaPredicted RBP8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 MAD2L2Q9UI95 211 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 CSADQ9Y600 493 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 MYH4Q9Y623 1939 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 ATAD5Q96QE3 1844 aa8.52□□□□□ -1.05
AC023908.2-201ENST00000558616 DOCK1Q14185 1865 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 NID2Q14112 1375 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 TRIM75PA6NK02 468 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 KLRF2D3W0D1 207 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 CELF2O95319 508 aaKnown RBP8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 NDUFB10O96000 172 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 PTPRAP18433 802 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 SLC1A4P43007 532 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 GNAQP50148 359 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 HMGN5P82970 282 aaKnown RBP8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 AKAP17AQ02040 695 aaKnown RBP8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 SPP2Q13103 211 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 IKQ13123 557 aaPredicted RBP8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 VGLL4Q14135 290 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 PPP2R5BQ15173 497 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 NTRK3Q16288 839 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 KIAA1755Q5JYT7 1200 aa8.51□□□□□ -1.05
AC023908.2-201ENST00000558616 NOL9Q5SY16 702 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms