RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 ROBO3Q96MS0 1386 aa18.54■□□□□ 0.56
CSHL1-208ENST00000558609 SZT2Q5T011 3432 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 SPDYE16A6NNV3 312 aaPredicted RBP18.53■□□□□ 0.56
CSHL1-208ENST00000558609 MINDY4BA8MYZ0 360 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 APPP05067 770 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 TDO2P48775 406 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 CCNA1P78396 465 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 COG2Q14746 738 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 KIAA1755Q5JYT7 1200 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 CLEC10AQ8IUN9 316 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 IFNL3Q8IZI9 196 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 NUDT12Q9BQG2 462 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 UNC93B1Q9H1C4 597 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 HOXC10Q9NYD6 342 aa18.53■□□□□ 0.56
CSHL1-208ENST00000558609 PLXNB2O15031 1838 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 IGHDP01880 384 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 XRCC5P13010 732 aaKnown RBP18.52■□□□□ 0.56
CSHL1-208ENST00000558609 EEF2P13639 858 aaKnown RBP18.52■□□□□ 0.56
CSHL1-208ENST00000558609 RASA1P20936 1047 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 GPR142Q7Z601 462 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 TICAM2Q86XR7 235 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.56
CSHL1-208ENST00000558609 SOCS4Q8WXH5 440 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 SHISA4Q96DD7 197 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.52■□□□□ 0.56
CSHL1-208ENST00000558609 NACAP1Q9BZK3 213 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 LNPKQ9C0E8 428 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 VCPKMTQ9H867 229 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 MKNK2Q9HBH9 465 aa18.52■□□□□ 0.56
CSHL1-208ENST00000558609 SUPT16HQ9Y5B9 1047 aaKnown RBP18.52■□□□□ 0.56
CSHL1-208ENST00000558609 HMGCRP04035 888 aa18.51■□□□□ 0.55
CSHL1-208ENST00000558609 CAPN2P17655 700 aa18.51■□□□□ 0.55
CSHL1-208ENST00000558609 PLEKHH3Q7Z736 793 aa18.51■□□□□ 0.55
CSHL1-208ENST00000558609 USP6NLQ92738 828 aa18.51■□□□□ 0.55
CSHL1-208ENST00000558609 TANGO6Q9C0B7 1094 aa18.51■□□□□ 0.55
CSHL1-208ENST00000558609 ZNF287Q9HBT7 754 aa18.51■□□□□ 0.55
CSHL1-208ENST00000558609 BTBD7Q9P203 1132 aa18.51■□□□□ 0.55
CSHL1-208ENST00000558609 H0YGN5 161 aa18.5■□□□□ 0.55
CSHL1-208ENST00000558609 MORN1Q5T089 497 aa18.5■□□□□ 0.55
CSHL1-208ENST00000558609 U2AF1L4Q8WU68 220 aaKnown RBP18.5■□□□□ 0.55
CSHL1-208ENST00000558609 PAK6Q9NQU5 681 aaPredicted RBP18.5■□□□□ 0.55
CSHL1-208ENST00000558609 GREB1LQ9C091 1923 aaPredicted RBP18.49■□□□□ 0.55
CSHL1-208ENST00000558609 WDR46O15213 610 aaKnown RBP18.49■□□□□ 0.55
CSHL1-208ENST00000558609 SGPL1O95470 568 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 CYP2B6P20813 491 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 DSG3P32926 999 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 ATP2B2Q01814 1243 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 NUCB1Q02818 461 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 B4GALNT3Q6L9W6 998 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 CHD1LQ86WJ1 897 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 TRMT44Q8IYL2 757 aaKnown RBP18.49■□□□□ 0.55
CSHL1-208ENST00000558609 SPICE1Q8N0Z3 855 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 STK11IPQ8N1F8 1099 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 TRIB2Q92519 343 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 RLFQ13129 1914 aa18.49■□□□□ 0.55
CSHL1-208ENST00000558609 RGS2P41220 211 aa18.48■□□□□ 0.55
CSHL1-208ENST00000558609 UBE2Q1Q7Z7E8 422 aa18.48■□□□□ 0.55
CSHL1-208ENST00000558609 ZNF444Q8N0Y2 327 aaPredicted RBP18.48■□□□□ 0.55
CSHL1-208ENST00000558609 MB21D1Q8N884 522 aa18.48■□□□□ 0.55
CSHL1-208ENST00000558609 NAPBQ9H115 298 aa18.48■□□□□ 0.55
CSHL1-208ENST00000558609 GOPCQ9HD26 462 aa18.48■□□□□ 0.55
CSHL1-208ENST00000558609 HELLSQ9NRZ9 838 aa18.48■□□□□ 0.55
CSHL1-208ENST00000558609 NYAP2Q9P242 653 aa18.48■□□□□ 0.55
CSHL1-208ENST00000558609 RANBP2P49792 3224 aaKnown RBP18.47■□□□□ 0.55
CSHL1-208ENST00000558609 IGKV6D-41A0A0C4DH26 115 aa18.47■□□□□ 0.55
CSHL1-208ENST00000558609 SLC15A5A6NIM6 579 aa18.47■□□□□ 0.55
CSHL1-208ENST00000558609 FOXP2O15409 715 aa18.47■□□□□ 0.55
CSHL1-208ENST00000558609 FLOT1O75955 427 aa18.47■□□□□ 0.55
CSHL1-208ENST00000558609 PTPREP23469 700 aa18.47■□□□□ 0.55
CSHL1-208ENST00000558609 CCDC129Q6ZRS4 1044 aa18.47■□□□□ 0.55
CSHL1-208ENST00000558609 DEFB118Q96PH6 123 aa18.47■□□□□ 0.55
CSHL1-208ENST00000558609 OSBPL3Q9H4L5 887 aa18.47■□□□□ 0.55
CSHL1-208ENST00000558609 CWC22Q9HCG8 908 aaKnown RBP18.47■□□□□ 0.55
CSHL1-208ENST00000558609 RPTORQ8N122 1335 aa18.47■□□□□ 0.55
CSHL1-208ENST00000558609 PRDM1O75626 825 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 SLC3A2P08195 630 aaKnown RBP18.46■□□□□ 0.55
CSHL1-208ENST00000558609 PDE4BQ07343 736 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 PPARAQ07869 468 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 TRIM32Q13049 653 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 MAP2K5Q13163 448 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 MAP3K21Q5TCX8 1036 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 PLEKHM2Q8IWE5 1019 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 SHCBP1Q8NEM2 672 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 APBA2Q99767 749 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 MOV10L1Q9BXT6 1211 aaKnown RBP18.46■□□□□ 0.55
CSHL1-208ENST00000558609 SPATC1LQ9H0A9 340 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 CRISPLD2Q9H0B8 497 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.46■□□□□ 0.55
CSHL1-208ENST00000558609 HMX1Q9NP08 348 aaPredicted RBP18.46■□□□□ 0.55
CSHL1-208ENST00000558609 ADAMTS5Q9UNA0 930 aa18.46■□□□□ 0.55
CSHL1-208ENST00000558609 TFRCP02786 760 aaKnown RBP18.45■□□□□ 0.54
CSHL1-208ENST00000558609 WDR78Q5VTH9 848 aa18.45■□□□□ 0.54
CSHL1-208ENST00000558609 MKL1Q969V6 931 aa18.45■□□□□ 0.54
CSHL1-208ENST00000558609 ATG4CQ96DT6 458 aa18.45■□□□□ 0.54
CSHL1-208ENST00000558609 IVNS1ABPQ9Y6Y0 642 aa18.45■□□□□ 0.54
CSHL1-208ENST00000558609 A0A0G2JMZ2 1700 aa18.45■□□□□ 0.54
CSHL1-208ENST00000558609 TRIM6-TRIM34B2RNG4 842 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 STRNO43815 780 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 HOXC6P09630 235 aa18.44■□□□□ 0.54
CSHL1-208ENST00000558609 ZKSCAN1P17029 563 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms