RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ASPNQ9BXN1 380 aa4.64□□□□□ -1.67
HERC1-203ENST00000558532 DUSP15Q9H1R2 295 aaPredicted RBP4.64□□□□□ -1.67
HERC1-203ENST00000558532 PRDM7Q9NQW5 492 aa4.64□□□□□ -1.67
HERC1-203ENST00000558532 MBNL3Q9NUK0 354 aaKnown RBP4.64□□□□□ -1.67
HERC1-203ENST00000558532 WASH4PA8MWX3 477 aa4.63□□□□□ -1.67
HERC1-203ENST00000558532 TNFRSF10CO14798 259 aa4.63□□□□□ -1.67
HERC1-203ENST00000558532 ACRP10323 421 aa4.63□□□□□ -1.67
HERC1-203ENST00000558532 NME1P15531 152 aaKnown RBP4.63□□□□□ -1.67
HERC1-203ENST00000558532 TAL1P17542 331 aaPredicted RBP4.63□□□□□ -1.67
HERC1-203ENST00000558532 GJA8P48165 433 aa4.63□□□□□ -1.67
HERC1-203ENST00000558532 TNNI2P48788 182 aa4.63□□□□□ -1.67
HERC1-203ENST00000558532 GINM1Q9NU53 330 aa4.63□□□□□ -1.67
HERC1-203ENST00000558532 PPT2Q9UMR5 302 aa4.63□□□□□ -1.67
HERC1-203ENST00000558532 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.63□□□□□ -1.67
HERC1-203ENST00000558532 SHISA3A0PJX4 238 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 ESR1P03372 595 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 ITGB5P18084 799 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 GBP1P32455 592 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 SOX9P48436 509 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 ZP2Q05996 745 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 GAB4Q2WGN9 574 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 SLC23A3Q6PIS1 610 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 TMEM192Q8IY95 271 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 LRRN4CLQ8ND94 238 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 UBE2FQ969M7 185 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 GPRASP2Q96D09 838 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 SLC9A7Q96T83 725 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 GPR62Q9BZJ7 368 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 TGIF2Q9GZN2 237 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 ACBD3Q9H3P7 528 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 CARS2Q9HA77 564 aaKnown RBP4.62□□□□□ -1.67
HERC1-203ENST00000558532 ZSWIM5Q9P217 1185 aa4.62□□□□□ -1.67
HERC1-203ENST00000558532 PAPLNO95428 1278 aa4.61□□□□□ -1.67
HERC1-203ENST00000558532 TCF3P15923 654 aa4.61□□□□□ -1.67
HERC1-203ENST00000558532 CCNFP41002 786 aa4.61□□□□□ -1.67
HERC1-203ENST00000558532 LRRFIP1Q32MZ4 808 aaKnown RBP4.61□□□□□ -1.67
HERC1-203ENST00000558532 NBPF12Q5TAG4 269 aaPredicted RBP4.61□□□□□ -1.67
HERC1-203ENST00000558532 CCDC81Q6ZN84 652 aa4.61□□□□□ -1.67
HERC1-203ENST00000558532 LSRQ86X29 649 aaPredicted RBP4.61□□□□□ -1.67
HERC1-203ENST00000558532 TAB3Q8N5C8 712 aaPredicted RBP4.61□□□□□ -1.67
HERC1-203ENST00000558532 RBBP8NLQ8NC74 664 aaPredicted RBP4.61□□□□□ -1.67
HERC1-203ENST00000558532 PI4K2BQ8TCG2 481 aa4.61□□□□□ -1.67
HERC1-203ENST00000558532 FERD3LQ96RJ6 166 aa4.61□□□□□ -1.67
HERC1-203ENST00000558532 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.61□□□□□ -1.67
HERC1-203ENST00000558532 RC3H2Q9HBD1 1191 aaKnown RBP4.61□□□□□ -1.67
HERC1-203ENST00000558532 LMCD1Q9NZU5 365 aa4.61□□□□□ -1.67
HERC1-203ENST00000558532 KCNH3Q9ULD8 1083 aa4.61□□□□□ -1.67
HERC1-203ENST00000558532 BAZ1AQ9NRL2 1556 aaPredicted RBP4.61□□□□□ -1.67
HERC1-203ENST00000558532 IMPDH2P12268 514 aa4.6□□□□□ -1.67
HERC1-203ENST00000558532 TPP2P29144 1249 aaPredicted RBP4.6□□□□□ -1.67
HERC1-203ENST00000558532 RBM25P49756 843 aaKnown RBP4.6□□□□□ -1.67
HERC1-203ENST00000558532 SNW1Q13573 536 aaKnown RBP4.6□□□□□ -1.67
HERC1-203ENST00000558532 COL9A2Q14055 689 aaPredicted RBP4.6□□□□□ -1.67
HERC1-203ENST00000558532 RUFY4Q6ZNE9 571 aa4.6□□□□□ -1.67
HERC1-203ENST00000558532 TMPRSS7Q7RTY8 843 aa4.6□□□□□ -1.67
HERC1-203ENST00000558532 TSPYL5Q86VY4 417 aaPredicted RBP4.6□□□□□ -1.67
HERC1-203ENST00000558532 ZNF512BQ96KM6 892 aaPredicted RBP4.6□□□□□ -1.67
HERC1-203ENST00000558532 SLC6A18Q96N87 628 aa4.6□□□□□ -1.67
HERC1-203ENST00000558532 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
HERC1-203ENST00000558532 TRIT1Q9H3H1 467 aaKnown RBP4.6□□□□□ -1.67
HERC1-203ENST00000558532 IGSF5Q9NSI5 407 aa4.6□□□□□ -1.67
HERC1-203ENST00000558532 C19orf73Q9NVV2 129 aa4.6□□□□□ -1.67
HERC1-203ENST00000558532 EFR3BQ9Y2G0 817 aa4.6□□□□□ -1.67
HERC1-203ENST00000558532 FAM86C2PA6NEL3 165 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 CLEC3AO75596 197 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 RNF4P78317 190 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 EEA1Q15075 1411 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 ZYXQ15942 572 aaKnown RBP4.59□□□□□ -1.67
HERC1-203ENST00000558532 NBPF9Q3BBW0 867 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 INTS3Q68E01 1043 aaKnown RBP4.59□□□□□ -1.67
HERC1-203ENST00000558532 FLAD1Q8NFF5 587 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 SPATA32Q96LK8 384 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 TM9SF2Q99805 663 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 HDAC8Q9BY41 377 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 GPATCH2Q9NW75 528 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 TNIKQ9UKE5 1360 aa4.59□□□□□ -1.67
HERC1-203ENST00000558532 NACADO15069 1562 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 CEP162Q5TB80 1403 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 C9IYK1 514 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 GUCY2CP25092 1073 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 ERCC5P28715 1186 aaPredicted RBP4.58□□□□□ -1.68
HERC1-203ENST00000558532 NASPP49321 788 aaPredicted RBP4.58□□□□□ -1.68
HERC1-203ENST00000558532 NMIQ13287 307 aaPredicted RBP4.58□□□□□ -1.68
HERC1-203ENST00000558532 FBXW10Q5XX13 1052 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 TMC3Q7Z5M5 1100 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 ATG4DQ86TL0 474 aaPredicted RBP4.58□□□□□ -1.68
HERC1-203ENST00000558532 PPFIBP1Q86W92 1011 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 CREG2Q8IUH2 290 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 ALPK1Q96QP1 1244 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 CCSER2Q9H7U1 834 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 DUSP13Q9UII6 198 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 CTNND2Q9UQB3 1225 aa4.58□□□□□ -1.68
HERC1-203ENST00000558532 DNAJC25-GNG10A0A024R161 153 aa4.57□□□□□ -1.68
HERC1-203ENST00000558532 SHOXO15266 292 aa4.57□□□□□ -1.68
HERC1-203ENST00000558532 JUNBP17275 347 aaPredicted RBP4.57□□□□□ -1.68
HERC1-203ENST00000558532 GIPRP48546 466 aa4.57□□□□□ -1.68
HERC1-203ENST00000558532 RALGPS1Q5JS13 557 aa4.57□□□□□ -1.68
HERC1-203ENST00000558532 UNC5AQ6ZN44 842 aa4.57□□□□□ -1.68
HERC1-203ENST00000558532 SHDQ96IW2 340 aa4.57□□□□□ -1.68
HERC1-203ENST00000558532 SRRTQ9BXP5 876 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms