RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 USP17L20D6RJB6 530 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 TTLL1O95922 423 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 USP17L24Q0WX57 530 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 SPICE1Q8N0Z3 855 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 CD99L2Q8TCZ2 262 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 LPAR1Q92633 364 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 RPAP3Q9H6T3 665 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-205ENST00000558428 GOPCQ9HD26 462 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 MTMR4Q9NYA4 1195 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 U3KPZ7 1027 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-205ENST00000558428 NEDD4P46934 1319 aa14.62□□□□□ -0.07
SMAD3-205ENST00000558428 BCRP11274 1271 aa14.61□□□□□ -0.07
SMAD3-205ENST00000558428 KIF22Q14807 665 aa14.61□□□□□ -0.07
SMAD3-205ENST00000558428 KIAA1755Q5JYT7 1200 aa14.61□□□□□ -0.07
SMAD3-205ENST00000558428 CATSPERGQ6ZRH7 1159 aa14.61□□□□□ -0.07
SMAD3-205ENST00000558428 CTU1Q7Z7A3 348 aaKnown RBP14.61□□□□□ -0.07
SMAD3-205ENST00000558428 P2RX7Q99572 595 aaKnown RBP14.61□□□□□ -0.07
SMAD3-205ENST00000558428 ZSWIM8A7E2V4 1837 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 NMT2O60551 498 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 ECM2O94769 699 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-205ENST00000558428 GCLCP48506 637 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-205ENST00000558428 HERVK_113P62684 666 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 LACTBP83111 547 aaPredicted RBP14.6□□□□□ -0.07
SMAD3-205ENST00000558428 PPP4R3BQ5MIZ7 849 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 TNS4Q8IZW8 715 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 LRRC47Q8N1G4 583 aaKnown RBP14.6□□□□□ -0.07
SMAD3-205ENST00000558428 ANKRD13CQ8N6S4 541 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 ESR2Q92731 530 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 MAP4K1Q92918 833 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 TANGO6Q9C0B7 1094 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 LSG1Q9H089 658 aaKnown RBP14.6□□□□□ -0.07
SMAD3-205ENST00000558428 ANO2Q9NQ90 1003 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 STX8Q9UNK0 236 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 RBM8AQ9Y5S9 174 aaKnown RBP14.6□□□□□ -0.07
SMAD3-205ENST00000558428 MGAMO43451 1857 aa14.6□□□□□ -0.07
SMAD3-205ENST00000558428 WDR46O15213 610 aaKnown RBP14.59□□□□□ -0.07
SMAD3-205ENST00000558428 CYP21A2P08686 494 aa14.59□□□□□ -0.07
SMAD3-205ENST00000558428 ARHGEF6Q15052 776 aa14.59□□□□□ -0.07
SMAD3-205ENST00000558428 FAM110CQ1W6H9 321 aa14.59□□□□□ -0.07
SMAD3-205ENST00000558428 MKL1Q969V6 931 aa14.59□□□□□ -0.07
SMAD3-205ENST00000558428 EFCC1Q9HA90 598 aa14.59□□□□□ -0.07
SMAD3-205ENST00000558428 IL17RBQ9NRM6 502 aa14.59□□□□□ -0.07
SMAD3-205ENST00000558428 TRIM17Q9Y577 477 aa14.59□□□□□ -0.07
SMAD3-205ENST00000558428 DOCK3Q8IZD9 2030 aa14.59□□□□□ -0.07
SMAD3-205ENST00000558428 PARP14Q460N5 1801 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 B4E1Z4 1266 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 F5H6K3 240 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 KDM4AO75164 1064 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 NT5C2P49902 561 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 CAP1Q01518 475 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 KLRC3Q07444 240 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 FAM83BQ5T0W9 1011 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 OTOP1Q7RTM1 612 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 NKX2-3Q8TAU0 364 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 GTF3C2Q8WUA4 911 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-205ENST00000558428 KRT23Q9C075 422 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 ARHGAP39Q9C0H5 1083 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 MCOLN1Q9GZU1 580 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 CNNM2Q9H8M5 875 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 TCP11L1Q9NUJ3 509 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 SYNPO2Q9UMS6 1093 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 RLFQ13129 1914 aa14.58□□□□□ -0.08
SMAD3-205ENST00000558428 SPDYE16A6NNV3 312 aaPredicted RBP14.57□□□□□ -0.08
SMAD3-205ENST00000558428 FLOT1O75955 427 aa14.57□□□□□ -0.08
SMAD3-205ENST00000558428 NDUFB10O96000 172 aa14.57□□□□□ -0.08
SMAD3-205ENST00000558428 PSMC4P43686 418 aa14.57□□□□□ -0.08
SMAD3-205ENST00000558428 TRDNQ13061 729 aa14.57□□□□□ -0.08
SMAD3-205ENST00000558428 COG2Q14746 738 aa14.57□□□□□ -0.08
SMAD3-205ENST00000558428 SAMD1Q6SPF0 538 aaPredicted RBP14.57□□□□□ -0.08
SMAD3-205ENST00000558428 NUP88Q99567 741 aaPredicted RBP14.57□□□□□ -0.08
SMAD3-205ENST00000558428 PAGR1Q9BTK6 254 aa14.57□□□□□ -0.08
SMAD3-205ENST00000558428 TXNRD2Q9NNW7 524 aa14.57□□□□□ -0.08
SMAD3-205ENST00000558428 MORF4L1Q9UBU8 362 aa14.57□□□□□ -0.08
SMAD3-205ENST00000558428 PEX10O60683 326 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 FMNL1O95466 1100 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-205ENST00000558428 CTGFP29279 349 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 NOVP48745 357 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 FCGRTP55899 365 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 PKN2Q16513 984 aaKnown RBP14.56□□□□□ -0.08
SMAD3-205ENST00000558428 SLFN13Q68D06 897 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 GMCL1P1Q8NEA9 526 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 GPRC5AQ8NFJ5 357 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 ZKSCAN3Q9BRR0 538 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 HOXC10Q9NYD6 342 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 RBPJLQ9UBG7 517 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 RABGAP1Q9Y3P9 1069 aa14.56□□□□□ -0.08
SMAD3-205ENST00000558428 HTTP42858 3142 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 E7EWF7 191 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 DSG3P32926 999 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 ERVK-9P63128 1117 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 ERVK-24P63145 666 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 CCDC178Q5BJE1 867 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 POTEEQ6S8J3 1075 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 LBX2Q6XYB7 198 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 RALYLQ86SE5 291 aaKnown RBP14.55□□□□□ -0.08
SMAD3-205ENST00000558428 CHMP4CQ96CF2 233 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 TRIM47Q96LD4 638 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 TTC14Q96N46 770 aa14.55□□□□□ -0.08
SMAD3-205ENST00000558428 ZSWIM5Q9P217 1185 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms