RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ZBTB3Q9H5J0 574 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 JADE2Q9NQC1 790 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 INCENPQ9NQS7 918 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 TOMM22Q9NS69 142 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 ZNHIT6Q9NWK9 470 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 NRBP1Q9UHY1 535 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 ITGB1BP2Q9UKP3 347 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 TTF2Q9UNY4 1162 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 ZNF652Q9Y2D9 606 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 SRPRBQ9Y5M8 271 aaKnown RBP6.2□□□□□ -1.42
GABPB1-207ENST00000558335 LAMB2P55268 1798 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 PLCH1Q4KWH8 1693 aa6.2□□□□□ -1.42
GABPB1-207ENST00000558335 AKAP11Q9UKA4 1901 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 LRP5O75197 1615 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 CICQ96RK0 1608 aaPredicted RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 ERICH4A6NGS2 130 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 TRIM75PA6NK02 468 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 EXOC5O00471 708 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 MMP1P03956 469 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 POLR3DP05423 398 aaPredicted RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 GCFC2P16383 781 aaKnown RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 ITGA6P23229 1130 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 PTPREP23469 700 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 CALML3P27482 149 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 IGHMBP2P38935 993 aaKnown RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 ZAP70P43403 619 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 PLCD1P51178 756 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 EIF5P55010 431 aaKnown RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 PIP4K2BP78356 416 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 GRIK3Q13003 919 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 STIM1Q13586 685 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 BRD3Q15059 726 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 POSTNQ15063 836 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 DPCR1Q3MIW9 517 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC152Q4G0S7 254 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 LRRC24Q50LG9 513 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC181Q5TID7 509 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 LHX8Q68G74 356 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 IQCEQ6IPM2 695 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 GALNT17Q6IS24 598 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC70Q6NSX1 233 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 C17orf53Q8N3J3 647 aaPredicted RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 NME8Q8N427 588 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 OGFOD1Q8N543 542 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 NOC3LQ8WTT2 800 aaKnown RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 HDAC7Q8WUI4 952 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 C17orf50Q8WW18 174 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 RABGGTAQ92696 567 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 GOLGA1Q92805 767 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 BHMTQ93088 406 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 RPGRIP1Q96KN7 1286 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 BAG1Q99933 345 aaPredicted RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 MAF1Q9H063 256 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 TMX1Q9H3N1 280 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 MAGEF1Q9HAY2 307 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 NCOA5Q9HCD5 579 aaKnown RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 ARFGAP3Q9NP61 516 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 BATF3Q9NR55 127 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 IRAK4Q9NWZ3 460 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 AATFQ9NY61 560 aaKnown RBP eCLIP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 HPS5Q9UPZ3 1129 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 CLIC4Q9Y696 253 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 PDS5AQ29RF7 1337 aaKnown RBP6.19□□□□□ -1.42
GABPB1-207ENST00000558335 ITIH6Q6UXX5 1313 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 ABCA3Q99758 1704 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 MYH6P13533 1939 aa6.19□□□□□ -1.42
GABPB1-207ENST00000558335 GOLGA6L10A6NI86 522 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 AKR1B15C9JRZ8 316 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 LAD1O00515 517 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 IRS4O14654 1257 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 IDH1O75874 414 aaKnown RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 DDAH1O94760 285 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 SNUPNO95149 360 aaKnown RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 A1BGP04217 495 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 POTEIP0CG38 1075 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 H2AFXP16104 143 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 PDE6AP16499 860 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 HMGB2P26583 209 aaKnown RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 KIF5BP33176 963 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 KRT2P35908 639 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 CORO7P57737 925 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 GUCY1B3Q02153 619 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 DDR1Q08345 913 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 ORC2Q13416 577 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 SF3B2Q13435 895 aaKnown RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 PTPAQ15257 358 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 CCDC93Q567U6 631 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 SPATA1Q5VX52 437 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 GBP6Q6ZN66 633 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 TTLL7Q6ZT98 887 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 CATIPQ7Z7H3 387 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 ILDR1Q86SU0 546 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-207ENST00000558335 TRIM74Q86UV6 250 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 TRIM73Q86UV7 250 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 NLRP10Q86W26 655 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 TMTC1Q8IUR5 882 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 AMOTL1Q8IY63 956 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 IFNL3Q8IZI9 196 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 SPATA5Q8NB90 893 aa6.18□□□□□ -1.42
GABPB1-207ENST00000558335 PROCA1Q8NCQ7 364 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms