RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 C16orf86Q6ZW13 317 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 AMOTL1Q8IY63 956 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 KRT222Q8N1A0 295 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 SDR42E1Q8WUS8 393 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 ABHD8Q96I13 439 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 CCDC17Q96LX7 622 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 KIF2CQ99661 725 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 WDR18Q9BV38 432 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 NACAP1Q9BZK3 213 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 MCOLN1Q9GZU1 580 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 YY1AP1Q9H869 796 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 EFCC1Q9HA90 598 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.32□□□□□ -0.92
RTF1-205ENST00000558298 EPB41L4AQ9HCS5 686 aaPredicted RBP9.32□□□□□ -0.92
RTF1-205ENST00000558298 MCM9Q9NXL9 1143 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 ANAPC4Q9UJX5 808 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 PALD1Q9ULE6 856 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 SYNPO2Q9UMS6 1093 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 PARP14Q460N5 1801 aa9.32□□□□□ -0.92
RTF1-205ENST00000558298 CCDC171Q6TFL3 1326 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 CCL15-CCL14A0A0B4J2E2 113 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 A0A0D9SFI3 127 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 A0A0G2JLL6 359 aaPredicted RBP9.31□□□□□ -0.92
RTF1-205ENST00000558298 PRPF40AO75400 957 aaKnown RBP9.31□□□□□ -0.92
RTF1-205ENST00000558298 FGRP09769 529 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 SHMT1P34896 483 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 PLCD1P51178 756 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 CRHR2Q13324 411 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 SNAPC2Q13487 334 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 CCL15Q16663 113 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 SH3D19Q5HYK7 790 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 PRRT2Q7Z6L0 340 aaPredicted RBP9.31□□□□□ -0.92
RTF1-205ENST00000558298 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
RTF1-205ENST00000558298 ZNF287Q9HBT7 754 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 PICK1Q9NRD5 415 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 AFG3L2Q9Y4W6 797 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 SLC4A4Q9Y6R1 1079 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 MORC2Q9Y6X9 1032 aaPredicted RBP9.31□□□□□ -0.92
RTF1-205ENST00000558298 A0A0G2JMZ2 1700 aa9.31□□□□□ -0.92
RTF1-205ENST00000558298 TRIM6-TRIM34B2RNG4 842 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 BTBD19C9JJ37 291 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 PRKAB2O43741 272 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 POLR3DP05423 398 aaPredicted RBP9.3□□□□□ -0.92
RTF1-205ENST00000558298 CETPP11597 493 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 CBX1P83916 185 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 TEX35Q5T0J7 233 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 OTUD7BQ6GQQ9 843 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.3□□□□□ -0.92
RTF1-205ENST00000558298 CTU1Q7Z7A3 348 aaKnown RBP9.3□□□□□ -0.92
RTF1-205ENST00000558298 ANKRD23Q86SG2 305 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 IFNL3Q8IZI9 196 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 CRACR2BQ8N4Y2 399 aaPredicted RBP9.3□□□□□ -0.92
RTF1-205ENST00000558298 C12orf42Q96LP6 360 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 DSCC1Q9BVC3 393 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 AS3MTQ9HBK9 375 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 TMEM51Q9NW97 253 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 ZBTB21Q9ULJ3 1066 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 MYH4Q9Y623 1939 aa9.3□□□□□ -0.92
RTF1-205ENST00000558298 RLFQ13129 1914 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 SYCE3A1L190 88 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 USP17L5A8MUK1 530 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 C19orf81C9J6K1 198 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 USP17L12C9JPN9 530 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 USP17L21D6R901 530 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 HSPD1P10809 573 aaKnown RBP9.29□□□□□ -0.92
RTF1-205ENST00000558298 JAG1P78504 1218 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 GPS2Q13227 327 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 DGKZQ13574 1117 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 GPAT2Q6NUI2 795 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 TMEM179Q6ZVK1 233 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 FASTKD5Q7L8L6 764 aaKnown RBP9.29□□□□□ -0.92
RTF1-205ENST00000558298 ZNF589Q86UQ0 364 aaPredicted RBP9.29□□□□□ -0.92
RTF1-205ENST00000558298 ZNF710Q8N1W2 664 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 ZNF280CQ8ND82 737 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 RUFY2Q8WXA3 655 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 FAM227BQ96M60 508 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 SEC62Q99442 399 aaKnown RBP9.29□□□□□ -0.92
RTF1-205ENST00000558298 CWC15Q9P013 229 aaKnown RBP9.29□□□□□ -0.92
RTF1-205ENST00000558298 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.29□□□□□ -0.92
RTF1-205ENST00000558298 DDX41Q9UJV9 622 aaKnown RBP9.29□□□□□ -0.92
RTF1-205ENST00000558298 CENPFP49454 3210 aa9.29□□□□□ -0.92
RTF1-205ENST00000558298 BRCA2P51587 3418 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 MGAMO43451 1857 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 TLR2O60603 784 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 FKTNO75072 461 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 BRD1O95696 1058 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 CHMLP26374 656 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 NOVP48745 357 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 NMIQ13287 307 aaPredicted RBP9.28□□□□□ -0.92
RTF1-205ENST00000558298 CERKLQ49MI3 558 aaPredicted RBP9.28□□□□□ -0.92
RTF1-205ENST00000558298 AXDND1Q5T1B0 1012 aaPredicted RBP9.28□□□□□ -0.92
RTF1-205ENST00000558298 ZNF397Q8NF99 534 aaPredicted RBP9.28□□□□□ -0.92
RTF1-205ENST00000558298 KIAA1524Q8TCG1 905 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 GPT2Q8TD30 523 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 RILPL2Q969X0 211 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 IL17RAQ96F46 866 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 KIAA1683Q9H0B3 1180 aa9.28□□□□□ -0.92
RTF1-205ENST00000558298 NAPBQ9H115 298 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms