RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 TAF1CQ15572 869 aaPredicted RBP5.13□□□□□ -1.59
VPS13C-205ENST00000558088 ANKS4BQ8N8V4 417 aa5.13□□□□□ -1.59
VPS13C-205ENST00000558088 ASPNQ9BXN1 380 aa5.13□□□□□ -1.59
VPS13C-205ENST00000558088 IRF2BPLQ9H1B7 796 aa5.13□□□□□ -1.59
VPS13C-205ENST00000558088 GPR160Q9UJ42 338 aa5.13□□□□□ -1.59
VPS13C-205ENST00000558088 RFXAPO00287 272 aa5.12□□□□□ -1.59
VPS13C-205ENST00000558088 PEX10O60683 326 aa5.12□□□□□ -1.59
VPS13C-205ENST00000558088 DLG4P78352 724 aa5.12□□□□□ -1.59
VPS13C-205ENST00000558088 MLECQ14165 292 aa5.12□□□□□ -1.59
VPS13C-205ENST00000558088 MEI1Q5TIA1 1274 aa5.12□□□□□ -1.59
VPS13C-205ENST00000558088 SLFN12Q8IYM2 578 aa5.12□□□□□ -1.59
VPS13C-205ENST00000558088 PPP1R13LQ8WUF5 828 aa5.12□□□□□ -1.59
VPS13C-205ENST00000558088 INTS4Q96HW7 963 aaKnown RBP5.12□□□□□ -1.59
VPS13C-205ENST00000558088 TLR6Q9Y2C9 796 aa5.12□□□□□ -1.59
VPS13C-205ENST00000558088 YBX2Q9Y2T7 364 aaKnown RBP5.12□□□□□ -1.59
VPS13C-205ENST00000558088 CORINQ9Y5Q5 1042 aa5.12□□□□□ -1.59
VPS13C-205ENST00000558088 UPK3BL1B0FP48 263 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 UPK3BL2E5RIL1 263 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 ITGAEP38570 1179 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 XPCQ01831 940 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-205ENST00000558088 ZNF385BQ569K4 471 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 TMEM201Q5SNT2 666 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 TMEM151BQ8IW70 566 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 PHACTR4Q8IZ21 702 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 PHC3Q8NDX5 983 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 BAHD1Q8TBE0 780 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-205ENST00000558088 CCDC74BQ96LY2 380 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 MCOLN1Q9GZU1 580 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 KLHL3Q9UH77 587 aa5.11□□□□□ -1.59
VPS13C-205ENST00000558088 CNOT6Q9ULM6 557 aaKnown RBP5.11□□□□□ -1.59
VPS13C-205ENST00000558088 TEX51A0A1B0GUA7 166 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 ANKRD33BA6NCL7 494 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 CILPO75339 1184 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 PWP1Q13610 501 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 TCERG1LQ5VWI1 586 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 GATAD2BQ8WXI9 593 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 KREMEN1Q96MU8 473 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 ZCCHC4Q9H5U6 513 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 PARP2Q9UGN5 583 aa5.1□□□□□ -1.59
VPS13C-205ENST00000558088 SSU72P8A0A1W2PR75 194 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 RBM47A0AV96 593 aaKnown RBP5.09□□□□□ -1.59
VPS13C-205ENST00000558088 OR14I1A6ND48 311 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 LRRN2O75325 713 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 GBP1P32455 592 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 RNF4P78317 190 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 LMNB2Q03252 620 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 CAMK2GQ13555 558 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-205ENST00000558088 SLC14A2Q15849 920 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 TIGD5Q53EQ6 642 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 BNC2Q6ZN30 1099 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-205ENST00000558088 RELL1Q8IUW5 271 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 ZNF552Q9H707 407 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-205ENST00000558088 SP110Q9HB58 689 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 PARD6AQ9NPB6 346 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 REV1Q9UBZ9 1251 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 ZMYM5Q9UJ78 669 aa5.09□□□□□ -1.59
VPS13C-205ENST00000558088 HTR3BO95264 441 aa5.08□□□□□ -1.6
VPS13C-205ENST00000558088 BMP7P18075 431 aa5.08□□□□□ -1.6
VPS13C-205ENST00000558088 RPL10P27635 214 aaKnown RBP5.08□□□□□ -1.6
VPS13C-205ENST00000558088 TEKQ02763 1124 aa5.08□□□□□ -1.6
VPS13C-205ENST00000558088 SNAP47Q5SQN1 464 aa5.08□□□□□ -1.6
VPS13C-205ENST00000558088 OLFML2BQ68BL8 750 aa5.08□□□□□ -1.6
VPS13C-205ENST00000558088 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
VPS13C-205ENST00000558088 RNF111Q6ZNA4 994 aa5.08□□□□□ -1.6
VPS13C-205ENST00000558088 ENOX1Q8TC92 643 aaKnown RBP5.08□□□□□ -1.6
VPS13C-205ENST00000558088 KRTAP4-11Q9BYQ6 195 aa5.08□□□□□ -1.6
VPS13C-205ENST00000558088 MRS2Q9HD23 443 aa5.08□□□□□ -1.6
VPS13C-205ENST00000558088 PRR36Q9H6K5 1346 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 MYOCOSA0A1B0GUC4 107 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 RBAK-RBAKDNI3L0D1 243 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 F13A1P00488 732 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 PF4P02776 101 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 HOXA5P20719 270 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 GBP2P32456 591 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-205ENST00000558088 DAB2P98082 770 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 NMIQ13287 307 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-205ENST00000558088 ADGRF1Q5T601 910 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 RELTQ969Z4 430 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 CRELD1Q96HD1 420 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 TMEM74Q96NL1 305 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 RNF19AQ9NV58 838 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 SIRT5Q9NXA8 310 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 KCTD3Q9Y597 815 aa5.07□□□□□ -1.6
VPS13C-205ENST00000558088 FAM221AA4D161 298 aa5.06□□□□□ -1.6
VPS13C-205ENST00000558088 CHURC1-FNTBB4DL54 471 aa5.06□□□□□ -1.6
VPS13C-205ENST00000558088 F6X3S4 739 aa5.06□□□□□ -1.6
VPS13C-205ENST00000558088 GRIN3BO60391 1043 aa5.06□□□□□ -1.6
VPS13C-205ENST00000558088 BUD31P41223 144 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-205ENST00000558088 PCBP3P57721 371 aaKnown RBP5.06□□□□□ -1.6
VPS13C-205ENST00000558088 WAPLQ7Z5K2 1190 aa5.06□□□□□ -1.6
VPS13C-205ENST00000558088 SYTL5Q8TDW5 730 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-205ENST00000558088 KIF2CQ99661 725 aa5.06□□□□□ -1.6
VPS13C-205ENST00000558088 IRAK3Q9Y616 596 aa5.06□□□□□ -1.6
VPS13C-205ENST00000558088 USP31Q70CQ4 1352 aa5.05□□□□□ -1.6
VPS13C-205ENST00000558088 SHISA3A0PJX4 238 aa5.05□□□□□ -1.6
VPS13C-205ENST00000558088 HRKO00198 91 aa5.05□□□□□ -1.6
VPS13C-205ENST00000558088 SORBS3O60504 671 aa5.05□□□□□ -1.6
VPS13C-205ENST00000558088 PSPNO60542 156 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms