RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 PKN1Q16512 942 aa23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 USP17L2Q6R6M4 530 aa23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 METTL16Q86W50 562 aaKnown RBP23.66■■□□□ 1.38
SNRPA1-205ENST00000558036 TCHHQ07283 1943 aa23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 JAG1P78504 1218 aa23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 CEBPZQ03701 1054 aaKnown RBP23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 TRIM29Q14134 588 aa23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 WASF1Q92558 559 aa23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 CPVLQ9H3G5 476 aa23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 TTLL1O95922 423 aa23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 KIF23Q02241 960 aaPredicted RBP23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 SHISA4Q96DD7 197 aa23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 CCDC17Q96LX7 622 aa23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 MYH8P13535 1937 aa23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 COL2A1P02458 1487 aaPredicted RBP23.65■■□□□ 1.38
SNRPA1-205ENST00000558036 USP17L5A8MUK1 530 aa23.64■■□□□ 1.37
SNRPA1-205ENST00000558036 PRPF3O43395 683 aaKnown RBP23.64■■□□□ 1.37
SNRPA1-205ENST00000558036 SLC35G1Q2M3R5 365 aa23.64■■□□□ 1.37
SNRPA1-205ENST00000558036 FKBP1CQ5VVH2 108 aa23.64■■□□□ 1.37
SNRPA1-205ENST00000558036 MAP3K14Q99558 947 aa23.64■■□□□ 1.37
SNRPA1-205ENST00000558036 VEGFAP15692 232 aaPredicted RBP23.63■■□□□ 1.37
SNRPA1-205ENST00000558036 SEPT2Q15019 361 aa23.63■■□□□ 1.37
SNRPA1-205ENST00000558036 SKOR2Q2VWA4 1001 aaPredicted RBP23.63■■□□□ 1.37
SNRPA1-205ENST00000558036 MIGA2Q7L4E1 593 aa23.63■■□□□ 1.37
SNRPA1-205ENST00000558036 TMEM87AQ8NBN3 555 aa23.63■■□□□ 1.37
SNRPA1-205ENST00000558036 VPS54Q9P1Q0 977 aa23.63■■□□□ 1.37
SNRPA1-205ENST00000558036 PALM3A6NDB9 673 aaPredicted RBP23.62■■□□□ 1.37
SNRPA1-205ENST00000558036 RASA3Q14644 834 aa23.62■■□□□ 1.37
SNRPA1-205ENST00000558036 KIF4BQ2VIQ3 1234 aa23.62■■□□□ 1.37
SNRPA1-205ENST00000558036 FAM83AQ86UY5 434 aa23.62■■□□□ 1.37
SNRPA1-205ENST00000558036 RNF181Q9P0P0 153 aa23.62■■□□□ 1.37
SNRPA1-205ENST00000558036 CYTH3O43739 400 aa23.62■■□□□ 1.37
SNRPA1-205ENST00000558036 ABCB5Q2M3G0 1257 aa23.62■■□□□ 1.37
SNRPA1-205ENST00000558036 KLHL40Q2TBA0 621 aa23.62■■□□□ 1.37
SNRPA1-205ENST00000558036 FRMPD2Q68DX3 1309 aaPredicted RBP23.61■■□□□ 1.37
SNRPA1-205ENST00000558036 KLRF2D3W0D1 207 aa23.61■■□□□ 1.37
SNRPA1-205ENST00000558036 GH2P01242 217 aa23.61■■□□□ 1.37
SNRPA1-205ENST00000558036 PARP1P09874 1014 aaKnown RBP23.61■■□□□ 1.37
SNRPA1-205ENST00000558036 PDHBP11177 359 aa23.61■■□□□ 1.37
SNRPA1-205ENST00000558036 HERC5Q9UII4 1024 aaKnown RBP23.61■■□□□ 1.37
SNRPA1-205ENST00000558036 BAZ2BQ9UIF8 2168 aaKnown RBP23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 MMP1P03956 469 aa23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 EEF2P13639 858 aaKnown RBP23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 GPC2Q8N158 579 aa23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 SPATA32Q96LK8 384 aa23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 USP28Q96RU2 1077 aa23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 PGAP2Q9UHJ9 254 aa23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 HACL1Q9UJ83 578 aa23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 GNL2Q13823 731 aaKnown RBP23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 TRPM4Q8TD43 1214 aa23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 LEO1Q8WVC0 666 aaPredicted RBP23.6■■□□□ 1.37
SNRPA1-205ENST00000558036 BTBD18B2RXH4 712 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 RAD21O60216 631 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 MMP14P50281 582 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 TMEM179Q6ZVK1 233 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 SIAH1Q8IUQ4 282 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 GPRC5DQ9NZD1 345 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 H7C1D1 291 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 DDNO94850 711 aaPredicted RBP23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 GNAQP50148 359 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 ICA1Q05084 483 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 CAVIN1Q6NZI2 390 aaKnown RBP23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 DIS3L2Q8IYB7 885 aaKnown RBP23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 OXER1Q8TDS5 423 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 SCAND2PQ9GZW5 306 aaPredicted RBP23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 UBA5Q9GZZ9 404 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 KANSL2Q9H9L4 492 aa23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 RBM27Q9P2N5 1060 aaKnown RBP23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 GREB1LQ9C091 1923 aaPredicted RBP23.59■■□□□ 1.37
SNRPA1-205ENST00000558036 SCG2P13521 617 aa23.58■■□□□ 1.37
SNRPA1-205ENST00000558036 EPS15P42566 896 aa23.58■■□□□ 1.37
SNRPA1-205ENST00000558036 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.58■■□□□ 1.37
SNRPA1-205ENST00000558036 TNNI2P48788 182 aa23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 NR5A1Q13285 461 aa23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 MYSM1Q5VVJ2 828 aa23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 BRAPQ7Z569 592 aa23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 GPKOWQ92917 476 aaPredicted RBP eCLIP23.57■■□□□ 1.364e-9■■■□□ 16.8
SNRPA1-205ENST00000558036 VAT1LQ9HCJ6 419 aa23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 GPCPD1Q9NPB8 672 aa23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 U2AF2P26368 475 aaKnown RBP eCLIP23.57■■□□□ 1.362e-7■■■□□ 14.8
SNRPA1-205ENST00000558036 PFKFB3Q16875 520 aaPredicted RBP23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 CSPP1Q1MSJ5 1256 aa23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 RGS22Q8NE09 1264 aa23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 CFAP45Q9UL16 551 aa23.57■■□□□ 1.36
SNRPA1-205ENST00000558036 SBF1O95248 1867 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 SNHG28P0DPA3 235 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 SAFBQ15424 915 aaKnown RBP eCLIP23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 C9orf131Q5VYM1 1079 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 TEPSINQ96N21 525 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 ZNF396Q96N95 335 aaPredicted RBP23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 UBE2HP62256 183 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 TNFAIP1Q13829 316 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 HOMER1Q86YM7 354 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 DEFB129Q9H1M3 183 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 CABP5Q9NP86 173 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 NYAP2Q9P242 653 aa23.56■■□□□ 1.36
SNRPA1-205ENST00000558036 XBP1P17861 261 aa23.55■■□□□ 1.36
SNRPA1-205ENST00000558036 ANGEL2Q5VTE6 544 aaKnown RBP23.55■■□□□ 1.36
SNRPA1-205ENST00000558036 KCTD1Q719H9 257 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms