RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 FERD3LQ96RJ6 166 aa8.32□□□□□ -1.08
GPHN-215ENST00000557654 RC3H2Q9HBD1 1191 aaKnown RBP8.32□□□□□ -1.08
GPHN-215ENST00000557654 SHISA3A0PJX4 238 aa8.31□□□□□ -1.08
GPHN-215ENST00000557654 MEIS3P2A8K0S8 358 aa8.31□□□□□ -1.08
GPHN-215ENST00000557654 SLC9A7Q96T83 725 aa8.31□□□□□ -1.08
GPHN-215ENST00000557654 EFR3BQ9Y2G0 817 aa8.31□□□□□ -1.08
GPHN-215ENST00000557654 ACRP10323 421 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 TPP2P29144 1249 aaPredicted RBP8.3□□□□□ -1.08
GPHN-215ENST00000557654 CHMP4BP1P59074 171 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 RUFY4Q6ZNE9 571 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 THAP5Q7Z6K1 395 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 TMEM192Q8IY95 271 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 GPRASP2Q96D09 838 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 ASPNQ9BXN1 380 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 KCNH3Q9ULD8 1083 aa8.3□□□□□ -1.08
GPHN-215ENST00000557654 TNFRSF10CO14798 259 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 ESR1P03372 595 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 SRFP11831 508 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 SNW1Q13573 536 aaKnown RBP8.29□□□□□ -1.08
GPHN-215ENST00000557654 LRRFIP1Q32MZ4 808 aaKnown RBP8.29□□□□□ -1.08
GPHN-215ENST00000557654 SLC23A3Q6PIS1 610 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 CREG2Q8IUH2 290 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 TGIF2Q9GZN2 237 aa8.29□□□□□ -1.08
GPHN-215ENST00000557654 GJA8P48165 433 aa8.28□□□□□ -1.08
GPHN-215ENST00000557654 NBPF12Q5TAG4 269 aaPredicted RBP8.28□□□□□ -1.08
GPHN-215ENST00000557654 SLC6A18Q96N87 628 aa8.28□□□□□ -1.08
GPHN-215ENST00000557654 GPR62Q9BZJ7 368 aa8.28□□□□□ -1.08
GPHN-215ENST00000557654 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.28□□□□□ -1.08
GPHN-215ENST00000557654 CLEC3AO75596 197 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 TCF3P15923 654 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 ZYXQ15942 572 aaKnown RBP8.27□□□□□ -1.09
GPHN-215ENST00000557654 GAB4Q2WGN9 574 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 LSRQ86X29 649 aaPredicted RBP8.27□□□□□ -1.09
GPHN-215ENST00000557654 RASGRP4Q8TDF6 673 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 CCSER2Q9H7U1 834 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 GPATCH2Q9NW75 528 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 LMCD1Q9NZU5 365 aa8.27□□□□□ -1.09
GPHN-215ENST00000557654 PAPLNO95428 1278 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 IMPDH2P12268 514 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 ERCC5P28715 1186 aaPredicted RBP8.26□□□□□ -1.09
GPHN-215ENST00000557654 SOX9P48436 509 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 NASPP49321 788 aaPredicted RBP8.26□□□□□ -1.09
GPHN-215ENST00000557654 TMC3Q7Z5M5 1100 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 TSPYL5Q86VY4 417 aaPredicted RBP8.26□□□□□ -1.09
GPHN-215ENST00000557654 TRIT1Q9H3H1 467 aaKnown RBP8.26□□□□□ -1.09
GPHN-215ENST00000557654 DUSP13Q9UII6 198 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 MINPP1Q9UNW1 487 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 INPP5FQ9Y2H2 1132 aa8.26□□□□□ -1.09
GPHN-215ENST00000557654 ITGB5P18084 799 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 RNF4P78317 190 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 NBPF9Q3BBW0 867 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 TDRD10Q5VZ19 366 aaKnown RBP8.25□□□□□ -1.09
GPHN-215ENST00000557654 C19orf73Q9NVV2 129 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 SLAMF8Q9P0V8 285 aa8.25□□□□□ -1.09
GPHN-215ENST00000557654 DNAJC25-GNG10A0A024R161 153 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 C9IYK1 514 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 NMIQ13287 307 aaPredicted RBP8.24□□□□□ -1.09
GPHN-215ENST00000557654 RALGPS1Q5JS13 557 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 TMPRSS7Q7RTY8 843 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 MKRN2Q9H000 416 aaKnown RBP8.24□□□□□ -1.09
GPHN-215ENST00000557654 FAM86C1Q9NVL1 165 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 PCDHA11Q9Y5I1 949 aa8.24□□□□□ -1.09
GPHN-215ENST00000557654 LTKP29376 864 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 CCNFP41002 786 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 EGR3Q06889 387 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 COL9A2Q14055 689 aaPredicted RBP8.23□□□□□ -1.09
GPHN-215ENST00000557654 CLEC16AQ2KHT3 1053 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 UNC5AQ6ZN44 842 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 PPFIBP1Q86W92 1011 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 RBBP8NLQ8NC74 664 aaPredicted RBP8.23□□□□□ -1.09
GPHN-215ENST00000557654 ALPK1Q96QP1 1244 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 TM9SF2Q99805 663 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 SRRTQ9BXP5 876 aaKnown RBP8.23□□□□□ -1.09
GPHN-215ENST00000557654 PRDM14Q9GZV8 571 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 CTNND2Q9UQB3 1225 aa8.23□□□□□ -1.09
GPHN-215ENST00000557654 GUCY2CP25092 1073 aa8.22□□□□□ -1.09
GPHN-215ENST00000557654 INTS3Q68E01 1043 aaKnown RBP8.22□□□□□ -1.09
GPHN-215ENST00000557654 CRBNQ96SW2 442 aa8.22□□□□□ -1.09
GPHN-215ENST00000557654 HDAC8Q9BY41 377 aa8.22□□□□□ -1.09
GPHN-215ENST00000557654 ADAMTS10Q9H324 1103 aa8.22□□□□□ -1.09
GPHN-215ENST00000557654 SUCOQ9UBS9 1254 aaKnown RBP8.22□□□□□ -1.09
GPHN-215ENST00000557654 MEIS1O00470 390 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 PRAMEF1O95521 474 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 EIF6P56537 245 aaKnown RBP8.21□□□□□ -1.1
GPHN-215ENST00000557654 FYB2Q5VWT5 728 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 ATG4DQ86TL0 474 aaPredicted RBP8.21□□□□□ -1.1
GPHN-215ENST00000557654 SPATA32Q96LK8 384 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 ASCC2Q9H1I8 757 aaPredicted RBP8.21□□□□□ -1.1
GPHN-215ENST00000557654 CAPN10Q9HC96 672 aa8.21□□□□□ -1.1
GPHN-215ENST00000557654 CARMIL2Q6F5E8 1435 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 GIPRP48546 466 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 HK2P52789 917 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 ERVFC1P60507 584 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 TTC6Q86TZ1 520 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 TAB3Q8N5C8 712 aaPredicted RBP8.2□□□□□ -1.1
GPHN-215ENST00000557654 FLAD1Q8NFF5 587 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 SHDQ96IW2 340 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 GFOD1Q9NXC2 390 aa8.2□□□□□ -1.1
GPHN-215ENST00000557654 FBXL21Q9UKT6 434 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms