RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 TMEM265A0A087WTH1 108 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 GUCY1A2P33402 732 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 USP5P45974 858 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 EPHB4P54760 987 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 COG2Q14746 738 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 MIGA1Q8NAN2 632 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 SHCBP1Q8NEM2 672 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 SPATC1LQ9H0A9 340 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 CABP5Q9NP86 173 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 HOXC10Q9NYD6 342 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 TACC3Q9Y6A5 838 aa14.88□□□□□ -0.03
RTN1-208ENST00000557422 ERCC3P19447 782 aa14.87□□□□□ -0.03
RTN1-208ENST00000557422 SHMT1P34896 483 aa14.87□□□□□ -0.03
RTN1-208ENST00000557422 RARSP54136 660 aaKnown RBP14.87□□□□□ -0.03
RTN1-208ENST00000557422 TTC6Q86TZ1 520 aa14.87□□□□□ -0.03
RTN1-208ENST00000557422 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
RTN1-208ENST00000557422 PHF24Q9UPV7 400 aa14.87□□□□□ -0.03
RTN1-208ENST00000557422 SMCHD1A6NHR9 2005 aa14.87□□□□□ -0.03
RTN1-208ENST00000557422 IDH1O75874 414 aaKnown RBP14.86□□□□□ -0.03
RTN1-208ENST00000557422 PLCD1P51178 756 aa14.86□□□□□ -0.03
RTN1-208ENST00000557422 GRIN2CQ14957 1233 aa14.86□□□□□ -0.03
RTN1-208ENST00000557422 SEPT2Q15019 361 aa14.86□□□□□ -0.03
RTN1-208ENST00000557422 FAM47AQ5JRC9 791 aa14.86□□□□□ -0.03
RTN1-208ENST00000557422 TJAP1Q5JTD0 557 aa14.86□□□□□ -0.03
RTN1-208ENST00000557422 CERS3Q8IU89 383 aa14.86□□□□□ -0.03
RTN1-208ENST00000557422 USP38Q8NB14 1042 aa14.86□□□□□ -0.03
RTN1-208ENST00000557422 SLC5A4Q9NY91 659 aa14.86□□□□□ -0.03
RTN1-208ENST00000557422 A0A1W2PRG0 241 aa14.85□□□□□ -0.03
RTN1-208ENST00000557422 KIAA0355O15063 1070 aa14.85□□□□□ -0.03
RTN1-208ENST00000557422 CLTBP09497 229 aa14.85□□□□□ -0.03
RTN1-208ENST00000557422 COL9A1P20849 921 aa14.85□□□□□ -0.03
RTN1-208ENST00000557422 ABRAQ8N0Z2 381 aa14.85□□□□□ -0.03
RTN1-208ENST00000557422 MAML3Q96JK9 1138 aa14.85□□□□□ -0.03
RTN1-208ENST00000557422 TANGO6Q9C0B7 1094 aa14.85□□□□□ -0.03
RTN1-208ENST00000557422 MROH8Q9H579 483 aa14.85□□□□□ -0.03
RTN1-208ENST00000557422 TNFRSF10AO00220 468 aa14.84□□□□□ -0.03
RTN1-208ENST00000557422 RAG1P15918 1043 aa14.84□□□□□ -0.03
RTN1-208ENST00000557422 OS9Q13438 667 aaPredicted RBP14.84□□□□□ -0.03
RTN1-208ENST00000557422 POLA2Q14181 598 aa14.84□□□□□ -0.03
RTN1-208ENST00000557422 KIAA1755Q5JYT7 1200 aa14.84□□□□□ -0.03
RTN1-208ENST00000557422 MAGEB6Q8N7X4 407 aa14.84□□□□□ -0.03
RTN1-208ENST00000557422 MB21D1Q8N884 522 aa14.84□□□□□ -0.03
RTN1-208ENST00000557422 XPNPEP3Q9NQH7 507 aa14.84□□□□□ -0.03
RTN1-208ENST00000557422 DBNLQ9UJU6 430 aaKnown RBP14.84□□□□□ -0.03
RTN1-208ENST00000557422 TNNQ9UQP3 1299 aa14.84□□□□□ -0.03
RTN1-208ENST00000557422 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.83□□□□□ -0.04
RTN1-208ENST00000557422 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.83□□□□□ -0.04
RTN1-208ENST00000557422 TRIM27P14373 513 aa14.83□□□□□ -0.04
RTN1-208ENST00000557422 DNAJB2P25686 324 aa14.83□□□□□ -0.04
RTN1-208ENST00000557422 DSG3P32926 999 aa14.83□□□□□ -0.04
RTN1-208ENST00000557422 FPGSQ05932 587 aa14.83□□□□□ -0.04
RTN1-208ENST00000557422 GABPAQ06546 454 aa14.83□□□□□ -0.04
RTN1-208ENST00000557422 PLS1Q14651 629 aa14.83□□□□□ -0.04
RTN1-208ENST00000557422 NCAPG2Q86XI2 1143 aa14.83□□□□□ -0.04
RTN1-208ENST00000557422 ZNF576Q9H609 170 aa14.83□□□□□ -0.04
RTN1-208ENST00000557422 TLR7Q9NYK1 1049 aaKnown RBP14.83□□□□□ -0.04
RTN1-208ENST00000557422 ZNFX1Q9P2E3 1918 aaKnown RBP14.83□□□□□ -0.04
RTN1-208ENST00000557422 A0A0G2JMZ2 1700 aa14.83□□□□□ -0.04
RTN1-208ENST00000557422 MUC3AQ02505 3323 aa14.82□□□□□ -0.04
RTN1-208ENST00000557422 MPHOSPH10O00566 681 aaKnown RBP14.82□□□□□ -0.04
RTN1-208ENST00000557422 PQBP1O60828 265 aaKnown RBP14.82□□□□□ -0.04
RTN1-208ENST00000557422 PGK1P00558 417 aa14.82□□□□□ -0.04
RTN1-208ENST00000557422 POLR3DP05423 398 aaPredicted RBP14.82□□□□□ -0.04
RTN1-208ENST00000557422 RARBP10826 455 aa14.82□□□□□ -0.04
RTN1-208ENST00000557422 FCER1AP12319 257 aa14.82□□□□□ -0.04
RTN1-208ENST00000557422 EVX2Q03828 476 aa14.82□□□□□ -0.04
RTN1-208ENST00000557422 RNF180Q86T96 592 aa14.82□□□□□ -0.04
RTN1-208ENST00000557422 SSH3Q8TE77 659 aa14.82□□□□□ -0.04
RTN1-208ENST00000557422 TMEM39AQ9NV64 488 aa14.82□□□□□ -0.04
RTN1-208ENST00000557422 NRBP1Q9UHY1 535 aa14.82□□□□□ -0.04
RTN1-208ENST00000557422 NCOR1O75376 2440 aa14.81□□□□□ -0.04
RTN1-208ENST00000557422 A0A1W2PQ45 241 aaPredicted RBP14.81□□□□□ -0.04
RTN1-208ENST00000557422 A0A1W2PQY0 241 aa14.81□□□□□ -0.04
RTN1-208ENST00000557422 IPO8O15397 1037 aaKnown RBP14.81□□□□□ -0.04
RTN1-208ENST00000557422 SURF6O75683 361 aaKnown RBP14.81□□□□□ -0.04
RTN1-208ENST00000557422 TIFAQ96CG3 184 aa14.81□□□□□ -0.04
RTN1-208ENST00000557422 ATG4CQ96DT6 458 aa14.81□□□□□ -0.04
RTN1-208ENST00000557422 RIOK1Q9BRS2 568 aaKnown RBP14.81□□□□□ -0.04
RTN1-208ENST00000557422 CCDC8Q9H0W5 538 aaPredicted RBP14.81□□□□□ -0.04
RTN1-208ENST00000557422 ANTXR1Q9H6X2 564 aa14.81□□□□□ -0.04
RTN1-208ENST00000557422 MYO9BQ13459 2157 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 BCAR3O75815 825 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 FLOT1O75955 427 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 TAL1P17542 331 aaPredicted RBP14.8□□□□□ -0.04
RTN1-208ENST00000557422 ATP8B2P98198 1209 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 FAAP100Q0VG06 881 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 MAP3K12Q12852 859 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 TMED8Q6PL24 325 aaPredicted RBP14.8□□□□□ -0.04
RTN1-208ENST00000557422 ANKRD33Q7Z3H0 272 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 SIAH1Q8IUQ4 282 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 EAF2Q96CJ1 260 aaPredicted RBP14.8□□□□□ -0.04
RTN1-208ENST00000557422 TOX2Q96NM4 488 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 TINF2Q9BSI4 451 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 RAPGEFL1Q9UHV5 662 aa14.8□□□□□ -0.04
RTN1-208ENST00000557422 DCDC2CA8MYV0 355 aa14.79□□□□□ -0.04
RTN1-208ENST00000557422 SLC25A27O95847 323 aa14.79□□□□□ -0.04
RTN1-208ENST00000557422 PGK2P07205 417 aa14.79□□□□□ -0.04
RTN1-208ENST00000557422 TMEM132BQ14DG7 1078 aa14.79□□□□□ -0.04
RTN1-208ENST00000557422 SPICE1Q8N0Z3 855 aa14.79□□□□□ -0.04
RTN1-208ENST00000557422 SLC44A5Q8NCS7 719 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms