RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 RARBP10826 455 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 FCER1AP12319 257 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 SHMT1P34896 483 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 DYNLL1P63167 89 aaKnown RBP12.39□□□□□ -0.43
RDH11-210ENST00000557331 SHHQ15465 462 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 GJC2Q5T442 439 aaPredicted RBP12.39□□□□□ -0.43
RDH11-210ENST00000557331 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 CCDC174Q6PII3 467 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 TMEM179Q6ZVK1 233 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 ACER1Q8TDN7 264 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 TANGO6Q9C0B7 1094 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 DBNLQ9UJU6 430 aaKnown RBP12.39□□□□□ -0.43
RDH11-210ENST00000557331 DIS3Q9Y2L1 958 aaKnown RBP12.39□□□□□ -0.43
RDH11-210ENST00000557331 EYSQ5T1H1 3165 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 CDH23Q9H251 3354 aa12.39□□□□□ -0.43
RDH11-210ENST00000557331 CDK5RAP2Q96SN8 1893 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 MAGEB6P1A0A0J9YX57 407 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 ERCC3P19447 782 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 GABPAQ06546 454 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 SHROOM1Q2M3G4 852 aaPredicted RBP12.38□□□□□ -0.43
RDH11-210ENST00000557331 AMOTL1Q8IY63 956 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 MSL3Q8N5Y2 521 aaKnown RBP12.38□□□□□ -0.43
RDH11-210ENST00000557331 MIGA1Q8NAN2 632 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 TRPV1Q8NER1 839 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 FRAT1Q92837 279 aaPredicted RBP12.38□□□□□ -0.43
RDH11-210ENST00000557331 BADQ92934 168 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 CCDC17Q96LX7 622 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 FAM161BQ96MY7 647 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 TOX2Q96NM4 488 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 ARHGEF10LQ9HCE6 1279 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 PRDM5Q9NQX1 630 aaPredicted RBP12.38□□□□□ -0.43
RDH11-210ENST00000557331 PHF24Q9UPV7 400 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 NDUFB9Q9Y6M9 179 aa12.38□□□□□ -0.43
RDH11-210ENST00000557331 ZNF236Q9UL36 1845 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 SPTBN5Q9NRC6 3674 aaKnown RBP12.37□□□□□ -0.43
RDH11-210ENST00000557331 MPHOSPH10O00566 681 aaKnown RBP12.37□□□□□ -0.43
RDH11-210ENST00000557331 DSG3P32926 999 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 ADCYAP1R1P41586 468 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 SEPT2Q15019 361 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 LRRC41Q15345 812 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 NCAPG2Q86XI2 1143 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 TSEN34Q9BSV6 310 aaKnown RBP12.37□□□□□ -0.43
RDH11-210ENST00000557331 PRDM6Q9NQX0 595 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 PDLIM7Q9NR12 457 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 MCM9Q9NXL9 1143 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 RLFQ13129 1914 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 FRMPD3Q5JV73 1810 aa12.37□□□□□ -0.43
RDH11-210ENST00000557331 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.36□□□□□ -0.43
RDH11-210ENST00000557331 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.36□□□□□ -0.43
RDH11-210ENST00000557331 KIAA0355O15063 1070 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 WDR46O15213 610 aaKnown RBP12.36□□□□□ -0.43
RDH11-210ENST00000557331 FLOT1O75955 427 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 CLTBP09497 229 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 FOSL2P15408 326 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 PLCD1P51178 756 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 TLE2Q04725 743 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 TRIM60Q495X7 471 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 FTSJ3Q8IY81 847 aaKnown RBP12.36□□□□□ -0.43
RDH11-210ENST00000557331 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.36□□□□□ -0.43
RDH11-210ENST00000557331 NUP133Q8WUM0 1156 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 EAF2Q96CJ1 260 aaPredicted RBP12.36□□□□□ -0.43
RDH11-210ENST00000557331 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 MAML3Q96JK9 1138 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 RIOK1Q9BRS2 568 aaKnown RBP12.36□□□□□ -0.43
RDH11-210ENST00000557331 XPNPEP3Q9NQH7 507 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 TMX2Q9Y320 296 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 MYO9BQ13459 2157 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 MROH7Q68CQ1 1323 aa12.36□□□□□ -0.43
RDH11-210ENST00000557331 ROBO3Q96MS0 1386 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 DCDC2CA8MYV0 355 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 COBLO75128 1261 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
RDH11-210ENST00000557331 RAG1P15918 1043 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 GUCY1A2P33402 732 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 PLS1Q14651 629 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 KCTD2Q14681 263 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 C9orf50Q5SZB4 431 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 SLC9C2Q5TAH2 1124 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 TMEM57Q8N5G2 664 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 CLUAP1Q96AJ1 413 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 RNPC3Q96LT9 517 aaKnown RBP12.35□□□□□ -0.43
RDH11-210ENST00000557331 TINF2Q9BSI4 451 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 CCDC8Q9H0W5 538 aaPredicted RBP12.35□□□□□ -0.43
RDH11-210ENST00000557331 ATP8A2Q9NTI2 1148 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 CNPY2Q9Y2B0 182 aa12.35□□□□□ -0.43
RDH11-210ENST00000557331 MOXD2PA6NHM9 499 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 CCER2I3L3R5 266 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 BCAR3O75815 825 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 AKR1A1P14550 325 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 FPGSQ05932 587 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 ANKRD33Q7Z3H0 272 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 RIOX2Q8IUF8 465 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 VCPKMTQ9H867 229 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 KANSL2Q9H9L4 492 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 TMEM39AQ9NV64 488 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 ADAMTS5Q9UNA0 930 aa12.34□□□□□ -0.43
RDH11-210ENST00000557331 A0A1W2PRG0 241 aa12.33□□□□□ -0.44
RDH11-210ENST00000557331 TRIM43BA6NCK2 446 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms