RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TIMM10P62072 90 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 GADL1Q6ZQY3 521 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 PROCA1Q8NCQ7 364 aaPredicted RBP10.69□□□□□ -0.7
VRK1-206ENST00000557222 DPF3Q92784 378 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 XAGE2Q96GT9 111 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 OSBPL5Q9H0X9 879 aaPredicted RBP10.69□□□□□ -0.7
VRK1-206ENST00000557222 ABCF2Q9UG63 623 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 AGTPBP1Q9UPW5 1226 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 ZSWIM8A7E2V4 1837 aa10.69□□□□□ -0.7
VRK1-206ENST00000557222 ADCY3O60266 1144 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 GCLCP48506 637 aaPredicted RBP10.68□□□□□ -0.7
VRK1-206ENST00000557222 FLT3LGP49771 235 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 RARSP54136 660 aaKnown RBP10.68□□□□□ -0.7
VRK1-206ENST00000557222 RHBDL3P58872 404 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 MECOMQ03112 1051 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 PABPC4Q13310 644 aaKnown RBP eCLIP10.68□□□□□ -0.75e-11■□□□□ 10.7
VRK1-206ENST00000557222 FAM110CQ1W6H9 321 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 SMCR8Q8TEV9 937 aaPredicted RBP10.68□□□□□ -0.7
VRK1-206ENST00000557222 U2AF1L4Q8WU68 220 aaKnown RBP10.68□□□□□ -0.7
VRK1-206ENST00000557222 COA7Q96BR5 231 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 MEIS3Q99687 375 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 DDX4Q9NQI0 724 aaKnown RBP10.68□□□□□ -0.7
VRK1-206ENST00000557222 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 MGAMO43451 1857 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 DOCK2Q92608 1830 aa10.68□□□□□ -0.7
VRK1-206ENST00000557222 A0A1W2PPC1 479 aa10.67□□□□□ -0.7
VRK1-206ENST00000557222 TNPO2O14787 897 aaKnown RBP10.67□□□□□ -0.7
VRK1-206ENST00000557222 IPO8O15397 1037 aaKnown RBP10.67□□□□□ -0.7
VRK1-206ENST00000557222 SRGAP3O43295 1099 aa10.67□□□□□ -0.7
VRK1-206ENST00000557222 JUNDP17535 347 aa10.67□□□□□ -0.7
VRK1-206ENST00000557222 ARID4AP29374 1257 aaPredicted RBP10.67□□□□□ -0.7
VRK1-206ENST00000557222 TFCP2Q12800 502 aa10.67□□□□□ -0.7
VRK1-206ENST00000557222 FOXC1Q12948 553 aa10.67□□□□□ -0.7
VRK1-206ENST00000557222 SPATA5Q8NB90 893 aa10.67□□□□□ -0.7
VRK1-206ENST00000557222 NSUN4Q96CB9 384 aaKnown RBP10.67□□□□□ -0.7
VRK1-206ENST00000557222 PRO3102Q9H379 93 aa10.67□□□□□ -0.7
VRK1-206ENST00000557222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.67□□□□□ -0.7
VRK1-206ENST00000557222 GINM1Q9NU53 330 aa10.67□□□□□ -0.7
VRK1-206ENST00000557222 HERC5Q9UII4 1024 aaKnown RBP10.67□□□□□ -0.7
VRK1-206ENST00000557222 GABRQQ9UN88 632 aa10.67□□□□□ -0.7
VRK1-206ENST00000557222 PTPRFP10586 1907 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 TRIM75PA6NK02 468 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 FARP2O94887 1054 aaPredicted RBP10.66□□□□□ -0.7
VRK1-206ENST00000557222 UQCRFS1P1P0C7P4 283 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 PICALMQ13492 652 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 SH3D19Q5HYK7 790 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 ZNF280CQ8ND82 737 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 ZNF384Q8TF68 577 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 UNC93B1Q9H1C4 597 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 DHX36Q9H2U1 1008 aaKnown RBP10.66□□□□□ -0.7
VRK1-206ENST00000557222 GPR108Q9NPR9 543 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 PAK6Q9NQU5 681 aaPredicted RBP10.66□□□□□ -0.7
VRK1-206ENST00000557222 HMG20BQ9P0W2 317 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 DOCK1Q14185 1865 aa10.66□□□□□ -0.7
VRK1-206ENST00000557222 PHIPQ8WWQ0 1821 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 DOCK3Q8IZD9 2030 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 USP17L5A8MUK1 530 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 ZBTB7BO15156 539 aaPredicted RBP10.65□□□□□ -0.7
VRK1-206ENST00000557222 TFRCP02786 760 aaKnown RBP10.65□□□□□ -0.7
VRK1-206ENST00000557222 GNAI2P04899 355 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 INHAP05111 366 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 CAP2P40123 477 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 G3BP1Q13283 466 aaKnown RBP eCLIP10.65□□□□□ -0.7
VRK1-206ENST00000557222 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 NEUROD6Q96NK8 337 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 WDR18Q9BV38 432 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 AS3MTQ9HBK9 375 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 PI4KBQ9UBF8 816 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 A0A0C4DFX4 3053 aa10.65□□□□□ -0.7
VRK1-206ENST00000557222 BAG3O95817 575 aa10.64□□□□□ -0.71
VRK1-206ENST00000557222 TRIM32Q13049 653 aa10.64□□□□□ -0.71
VRK1-206ENST00000557222 SPP2Q13103 211 aa10.64□□□□□ -0.71
VRK1-206ENST00000557222 TREML2Q5T2D2 321 aa10.64□□□□□ -0.71
VRK1-206ENST00000557222 METTL16Q86W50 562 aaKnown RBP10.64□□□□□ -0.71
VRK1-206ENST00000557222 ANKRD13CQ8N6S4 541 aa10.64□□□□□ -0.71
VRK1-206ENST00000557222 NOL10Q9BSC4 688 aaKnown RBP10.64□□□□□ -0.71
VRK1-206ENST00000557222 RAI14Q9P0K7 980 aa10.64□□□□□ -0.71
VRK1-206ENST00000557222 C19orf81C9J6K1 198 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 CCER2I3L3R5 266 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 HMGCRP04035 888 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 ASNSP08243 561 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 ELNP15502 786 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 HOXA7P31268 230 aaPredicted RBP10.63□□□□□ -0.71
VRK1-206ENST00000557222 TMED8Q6PL24 325 aaPredicted RBP10.63□□□□□ -0.71
VRK1-206ENST00000557222 NECAB2Q7Z6G3 386 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 FOXP4Q8IVH2 680 aaPredicted RBP10.63□□□□□ -0.71
VRK1-206ENST00000557222 TEX11Q8IYF3 940 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 GTF3C2Q8WUA4 911 aaPredicted RBP10.63□□□□□ -0.71
VRK1-206ENST00000557222 ZNF512BQ96KM6 892 aaPredicted RBP10.63□□□□□ -0.71
VRK1-206ENST00000557222 DEFB118Q96PH6 123 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 LRP2BPQ9P2M1 347 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 MORF4L1Q9UBU8 362 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 GJD2Q9UKL4 321 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 LAMA3Q16787 3333 aa10.63□□□□□ -0.71
VRK1-206ENST00000557222 RPTORQ8N122 1335 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 SPTLC1O15269 473 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 DGAT1O75907 488 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 MCAMP43121 646 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 HMGCS2P54868 508 aa10.62□□□□□ -0.71
VRK1-206ENST00000557222 BACE1P56817 501 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms