RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 VCPKMTQ9H867 229 aa21.41■■□□□ 1.02
XRCC3-217ENST00000556980 BIN2Q9UBW5 565 aaPredicted RBP21.41■■□□□ 1.02
XRCC3-217ENST00000556980 RABGAP1Q9Y3P9 1069 aa21.41■■□□□ 1.02
XRCC3-217ENST00000556980 FOXP2O15409 715 aa21.4■■□□□ 1.02
XRCC3-217ENST00000556980 PDE4BQ07343 736 aa21.4■■□□□ 1.02
XRCC3-217ENST00000556980 IRF5Q13568 498 aa21.4■■□□□ 1.02
XRCC3-217ENST00000556980 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.4■■□□□ 1.02
XRCC3-217ENST00000556980 POTEFA5A3E0 1075 aa21.39■■□□□ 1.01
XRCC3-217ENST00000556980 RAD21O60216 631 aa21.39■■□□□ 1.01
XRCC3-217ENST00000556980 ADCY3O60266 1144 aa21.39■■□□□ 1.01
XRCC3-217ENST00000556980 SDSP20132 328 aa21.39■■□□□ 1.01
XRCC3-217ENST00000556980 MAPK4P31152 587 aa21.39■■□□□ 1.01
XRCC3-217ENST00000556980 KIAA1755Q5JYT7 1200 aa21.39■■□□□ 1.01
XRCC3-217ENST00000556980 VPS53Q5VIR6 699 aa21.39■■□□□ 1.01
XRCC3-217ENST00000556980 GOPCQ9HD26 462 aa21.39■■□□□ 1.01
XRCC3-217ENST00000556980 MYH8P13535 1937 aa21.39■■□□□ 1.01
XRCC3-217ENST00000556980 SPDYE16A6NNV3 312 aaPredicted RBP21.38■■□□□ 1.01
XRCC3-217ENST00000556980 CCNA1P78396 465 aa21.38■■□□□ 1.01
XRCC3-217ENST00000556980 COG2Q14746 738 aa21.38■■□□□ 1.01
XRCC3-217ENST00000556980 POTEEQ6S8J3 1075 aa21.38■■□□□ 1.01
XRCC3-217ENST00000556980 LBX2Q6XYB7 198 aa21.38■■□□□ 1.01
XRCC3-217ENST00000556980 CWC22Q9HCG8 908 aaKnown RBP21.38■■□□□ 1.01
XRCC3-217ENST00000556980 DIAPH3Q9NSV4 1193 aa21.38■■□□□ 1.01
XRCC3-217ENST00000556980 CCDC171Q6TFL3 1326 aa21.37■■□□□ 1.01
XRCC3-217ENST00000556980 WDR46O15213 610 aaKnown RBP21.37■■□□□ 1.01
XRCC3-217ENST00000556980 ELNP15502 786 aa21.37■■□□□ 1.01
XRCC3-217ENST00000556980 MFAP1P55081 439 aaKnown RBP21.37■■□□□ 1.01
XRCC3-217ENST00000556980 UBXN2AP68543 259 aa21.37■■□□□ 1.01
XRCC3-217ENST00000556980 Q3C1V9 767 aa21.37■■□□□ 1.01
XRCC3-217ENST00000556980 PXYLP1Q8TE99 480 aa21.37■■□□□ 1.01
XRCC3-217ENST00000556980 HOXC10Q9NYD6 342 aa21.37■■□□□ 1.01
XRCC3-217ENST00000556980 HIP1O00291 1037 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 CNMDO75829 334 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 FLOT1O75955 427 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 TSPY3P0CV98 308 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 TSPY8P0CW00 308 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 PDE4AP27815 886 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 ALX1Q15699 326 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 ZNF589Q86UQ0 364 aaPredicted RBP21.36■■□□□ 1.01
XRCC3-217ENST00000556980 SOCS4Q8WXH5 440 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 PORCNQ9H237 461 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 NYAP2Q9P242 653 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 MGAMO43451 1857 aa21.36■■□□□ 1.01
XRCC3-217ENST00000556980 CTDSPL2Q05D32 466 aa21.35■■□□□ 1.01
XRCC3-217ENST00000556980 WDR78Q5VTH9 848 aa21.35■■□□□ 1.01
XRCC3-217ENST00000556980 SAMD1Q6SPF0 538 aaPredicted RBP21.35■■□□□ 1.01
XRCC3-217ENST00000556980 BTBD7Q9P203 1132 aa21.35■■□□□ 1.01
XRCC3-217ENST00000556980 IGKV6D-41A0A0C4DH26 115 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 INHAP05111 366 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 HSPD1P10809 573 aaKnown RBP21.34■■□□□ 1.01
XRCC3-217ENST00000556980 CCL5P13501 91 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 EN2P19622 333 aaPredicted RBP21.34■■□□□ 1.01
XRCC3-217ENST00000556980 TFAP4Q01664 338 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 MTFR1Q15390 333 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 FAM47AQ5JRC9 791 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 CWC27Q6UX04 472 aaKnown RBP21.34■■□□□ 1.01
XRCC3-217ENST00000556980 GPR142Q7Z601 462 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 PLEKHH3Q7Z736 793 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 NEDD1Q8NHV4 660 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 CEP95Q96GE4 821 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 NUDT12Q9BQG2 462 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 CLIP2Q9UDT6 1046 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 ANAPC4Q9UJX5 808 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 GJD2Q9UKL4 321 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 PLIN4Q96Q06 1357 aa21.34■■□□□ 1.01
XRCC3-217ENST00000556980 FGAP02671 866 aa21.33■■□□□ 1.01
XRCC3-217ENST00000556980 DSG3P32926 999 aa21.33■■□□□ 1.01
XRCC3-217ENST00000556980 TTC22Q5TAA0 569 aa21.33■■□□□ 1.01
XRCC3-217ENST00000556980 MB21D1Q8N884 522 aa21.33■■□□□ 1.01
XRCC3-217ENST00000556980 RNF208Q9H0X6 261 aa21.33■■□□□ 1.01
XRCC3-217ENST00000556980 MTMR4Q9NYA4 1195 aa21.33■■□□□ 1.01
XRCC3-217ENST00000556980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.33■■□□□ 1.01
XRCC3-217ENST00000556980 ZMYM6O95789 1325 aa21.32■■□□□ 1
XRCC3-217ENST00000556980 CENPFP49454 3210 aa21.32■■□□□ 1
XRCC3-217ENST00000556980 TSPY2A6NKD2 308 aa21.32■■□□□ 1
XRCC3-217ENST00000556980 TTLL1O95922 423 aa21.32■■□□□ 1
XRCC3-217ENST00000556980 FAM83BQ5T0W9 1011 aa21.32■■□□□ 1
XRCC3-217ENST00000556980 ATG4CQ96DT6 458 aa21.32■■□□□ 1
XRCC3-217ENST00000556980 IVNS1ABPQ9Y6Y0 642 aa21.32■■□□□ 1
XRCC3-217ENST00000556980 GREB1LQ9C091 1923 aaPredicted RBP21.31■■□□□ 1
XRCC3-217ENST00000556980 F5H6K3 240 aa21.31■■□□□ 1
XRCC3-217ENST00000556980 NDUFB10O96000 172 aa21.31■■□□□ 1
XRCC3-217ENST00000556980 HMGCRP04035 888 aa21.31■■□□□ 1
XRCC3-217ENST00000556980 CYP2B6P20813 491 aa21.31■■□□□ 1
XRCC3-217ENST00000556980 KLRC3Q07444 240 aa21.31■■□□□ 1
XRCC3-217ENST00000556980 PPP4R3BQ5MIZ7 849 aa21.31■■□□□ 1
XRCC3-217ENST00000556980 UNC93B1Q9H1C4 597 aa21.31■■□□□ 1
XRCC3-217ENST00000556980 TOMM22Q9NS69 142 aa21.31■■□□□ 1
XRCC3-217ENST00000556980 SYNPO2Q9UMS6 1093 aa21.31■■□□□ 1
XRCC3-217ENST00000556980 RANBP6O60518 1105 aaKnown RBP21.3■■□□□ 1
XRCC3-217ENST00000556980 GSPT1P15170 499 aaKnown RBP21.3■■□□□ 1
XRCC3-217ENST00000556980 RGS2P41220 211 aa21.3■■□□□ 1
XRCC3-217ENST00000556980 PLS1Q14651 629 aa21.3■■□□□ 1
XRCC3-217ENST00000556980 LRRC47Q8N1G4 583 aaKnown RBP21.3■■□□□ 1
XRCC3-217ENST00000556980 NKX2-3Q8TAU0 364 aa21.3■■□□□ 1
XRCC3-217ENST00000556980 NUP88Q99567 741 aaPredicted RBP21.3■■□□□ 1
XRCC3-217ENST00000556980 MOV10L1Q9BXT6 1211 aaKnown RBP21.3■■□□□ 1
XRCC3-217ENST00000556980 SPATC1LQ9H0A9 340 aa21.3■■□□□ 1
XRCC3-217ENST00000556980 INCENPQ9NQS7 918 aa21.3■■□□□ 1
XRCC3-217ENST00000556980 FBXO28Q9NVF7 368 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms