RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 SHISA3A0PJX4 238 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 ZBTB7CA1YPR0 619 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 RGS13O14921 159 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 UBOX5O94941 541 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 ERVFC1P60507 584 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 EGR3Q06889 387 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 MLECQ14165 292 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 ZNF124Q15973 351 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 BCL11AQ9H165 835 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 ADAMTS10Q9H324 1103 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 FAM53CQ9NYF3 392 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 GMIPQ9P107 970 aa7.95□□□□□ -1.14
LINC00648-203ENST00000556923 RAG1P15918 1043 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 GBP1P32455 592 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 HK2P52789 917 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 JAG1P78504 1218 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 SEZ6Q53EL9 994 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 TMEM67Q5HYA8 995 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 OVOS1Q6IE37 1185 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 TMEM87AQ8NBN3 555 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 EHMT1Q9H9B1 1298 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 PCDHA11Q9Y5I1 949 aa7.94□□□□□ -1.14
LINC00648-203ENST00000556923 RBM47A0AV96 593 aaKnown RBP7.93□□□□□ -1.14
LINC00648-203ENST00000556923 POLR2BP30876 1174 aaKnown RBP7.93□□□□□ -1.14
LINC00648-203ENST00000556923 CLCQ05315 142 aa7.93□□□□□ -1.14
LINC00648-203ENST00000556923 APOBRQ0VD83 1088 aa7.93□□□□□ -1.14
LINC00648-203ENST00000556923 PRR23BQ6ZRT6 265 aa7.93□□□□□ -1.14
LINC00648-203ENST00000556923 HPXP02790 462 aa7.92□□□□□ -1.14
LINC00648-203ENST00000556923 RAC2P15153 192 aa7.92□□□□□ -1.14
LINC00648-203ENST00000556923 LTKP29376 864 aa7.92□□□□□ -1.14
LINC00648-203ENST00000556923 MFAP1P55081 439 aaKnown RBP7.92□□□□□ -1.14
LINC00648-203ENST00000556923 FZD5Q13467 585 aa7.92□□□□□ -1.14
LINC00648-203ENST00000556923 MPZL3Q6UWV2 235 aa7.92□□□□□ -1.14
LINC00648-203ENST00000556923 GK5Q6ZS86 529 aa7.92□□□□□ -1.14
LINC00648-203ENST00000556923 KSR1Q8IVT5 923 aa7.92□□□□□ -1.14
LINC00648-203ENST00000556923 ABHD4Q8TB40 342 aa7.92□□□□□ -1.14
LINC00648-203ENST00000556923 ZGLP1P0C6A0 271 aa7.91□□□□□ -1.14
LINC00648-203ENST00000556923 CDCP2Q5VXM1 449 aa7.91□□□□□ -1.14
LINC00648-203ENST00000556923 REXO1Q8N1G1 1221 aaKnown RBP7.91□□□□□ -1.14
LINC00648-203ENST00000556923 ATG4CQ96DT6 458 aa7.91□□□□□ -1.14
LINC00648-203ENST00000556923 EAF1Q96JC9 268 aaPredicted RBP7.91□□□□□ -1.14
LINC00648-203ENST00000556923 FAM84AQ96KN4 292 aa7.91□□□□□ -1.14
LINC00648-203ENST00000556923 NT5C1AQ9BXI3 368 aa7.91□□□□□ -1.14
LINC00648-203ENST00000556923 BACH2Q9BYV9 841 aa7.91□□□□□ -1.14
LINC00648-203ENST00000556923 CNNM2Q9H8M5 875 aa7.91□□□□□ -1.14
LINC00648-203ENST00000556923 SP110Q9HB58 689 aa7.91□□□□□ -1.14
LINC00648-203ENST00000556923 MCM4P33991 863 aa7.9□□□□□ -1.14
LINC00648-203ENST00000556923 CHMP4BP1P59074 171 aa7.9□□□□□ -1.14
LINC00648-203ENST00000556923 NLRC3Q7RTR2 1065 aa7.9□□□□□ -1.14
LINC00648-203ENST00000556923 SLITRK4Q8IW52 837 aa7.9□□□□□ -1.14
LINC00648-203ENST00000556923 MYLIPQ8WY64 445 aa7.9□□□□□ -1.14
LINC00648-203ENST00000556923 NKD1Q969G9 470 aa7.9□□□□□ -1.14
LINC00648-203ENST00000556923 SLC38A3Q99624 504 aa7.9□□□□□ -1.14
LINC00648-203ENST00000556923 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.9□□□□□ -1.14
LINC00648-203ENST00000556923 ANTXR1Q9H6X2 564 aa7.9□□□□□ -1.14
LINC00648-203ENST00000556923 TRHRP34981 398 aaPredicted RBP7.89□□□□□ -1.15
LINC00648-203ENST00000556923 ZNF76P36508 570 aa7.89□□□□□ -1.15
LINC00648-203ENST00000556923 RNF4P78317 190 aa7.89□□□□□ -1.15
LINC00648-203ENST00000556923 FANCCQ00597 558 aa7.89□□□□□ -1.15
LINC00648-203ENST00000556923 TEKQ02763 1124 aa7.89□□□□□ -1.15
LINC00648-203ENST00000556923 NMIQ13287 307 aaPredicted RBP7.89□□□□□ -1.15
LINC00648-203ENST00000556923 CLEC16AQ2KHT3 1053 aa7.89□□□□□ -1.15
LINC00648-203ENST00000556923 KIAA0825Q8IV33 1275 aa7.89□□□□□ -1.15
LINC00648-203ENST00000556923 PDZD8Q8NEN9 1154 aa7.89□□□□□ -1.15
LINC00648-203ENST00000556923 SPON2Q9BUD6 331 aa7.89□□□□□ -1.15
LINC00648-203ENST00000556923 ZNF165P49910 485 aa7.88□□□□□ -1.15
LINC00648-203ENST00000556923 PKN1Q16512 942 aa7.88□□□□□ -1.15
LINC00648-203ENST00000556923 NBPF12Q5TAG4 269 aaPredicted RBP7.88□□□□□ -1.15
LINC00648-203ENST00000556923 HDAC8Q9BY41 377 aa7.88□□□□□ -1.15
LINC00648-203ENST00000556923 EBF1Q9UH73 591 aa7.88□□□□□ -1.15
LINC00648-203ENST00000556923 MEIS3P2A8K0S8 358 aa7.87□□□□□ -1.15
LINC00648-203ENST00000556923 SNW1Q13573 536 aaKnown RBP7.87□□□□□ -1.15
LINC00648-203ENST00000556923 NBPF9Q3BBW0 867 aa7.87□□□□□ -1.15
LINC00648-203ENST00000556923 TIGD5Q53EQ6 642 aa7.87□□□□□ -1.15
LINC00648-203ENST00000556923 ZNF394Q53GI3 561 aa7.87□□□□□ -1.15
LINC00648-203ENST00000556923 TMC3Q7Z5M5 1100 aa7.87□□□□□ -1.15
LINC00648-203ENST00000556923 BHLHE22Q8NFJ8 381 aaPredicted RBP7.87□□□□□ -1.15
LINC00648-203ENST00000556923 ENOX1Q8TC92 643 aaKnown RBP7.87□□□□□ -1.15
LINC00648-203ENST00000556923 SYTL5Q8TDW5 730 aaPredicted RBP7.87□□□□□ -1.15
LINC00648-203ENST00000556923 DIRC2Q96SL1 478 aa7.87□□□□□ -1.15
LINC00648-203ENST00000556923 RNF32Q9H0A6 362 aa7.87□□□□□ -1.15
LINC00648-203ENST00000556923 ASCC2Q9H1I8 757 aaPredicted RBP7.87□□□□□ -1.15
LINC00648-203ENST00000556923 NSUN3Q9H649 340 aaKnown RBP7.87□□□□□ -1.15
LINC00648-203ENST00000556923 C19orf44Q9H6X5 657 aa7.87□□□□□ -1.15
LINC00648-203ENST00000556923 DBX1A6NMT0 343 aa7.86□□□□□ -1.15
LINC00648-203ENST00000556923 NME1P15531 152 aaKnown RBP7.86□□□□□ -1.15
LINC00648-203ENST00000556923 CCNFP41002 786 aa7.86□□□□□ -1.15
LINC00648-203ENST00000556923 USP48Q86UV5 1035 aa7.86□□□□□ -1.15
LINC00648-203ENST00000556923 DHX38Q92620 1227 aaKnown RBP7.86□□□□□ -1.15
LINC00648-203ENST00000556923 ZNF512BQ96KM6 892 aaPredicted RBP7.86□□□□□ -1.15
LINC00648-203ENST00000556923 KCNK12Q9HB15 430 aa7.86□□□□□ -1.15
LINC00648-203ENST00000556923 METTL5Q9NRN9 209 aaKnown RBP7.86□□□□□ -1.15
LINC00648-203ENST00000556923 ZNF281Q9Y2X9 895 aa7.86□□□□□ -1.15
LINC00648-203ENST00000556923 PCDHGB7Q9Y5F8 929 aa7.86□□□□□ -1.15
LINC00648-203ENST00000556923 FITM1A5D6W6 292 aa7.85□□□□□ -1.15
LINC00648-203ENST00000556923 TNFRSF10CO14798 259 aa7.85□□□□□ -1.15
LINC00648-203ENST00000556923 CLEC3AO75596 197 aa7.85□□□□□ -1.15
LINC00648-203ENST00000556923 RAD51AP2Q09MP3 1159 aa7.85□□□□□ -1.15
LINC00648-203ENST00000556923 LRRFIP1Q32MZ4 808 aaKnown RBP7.85□□□□□ -1.15
LINC00648-203ENST00000556923 SYDE1Q6ZW31 735 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms