RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 BCRP11274 1271 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 USP17L24Q0WX57 530 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 KIAA1755Q5JYT7 1200 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 CASC1Q6TDU7 716 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 KIAA1211Q6ZU35 1233 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 CLIP2Q9UDT6 1046 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 MGAMO43451 1857 aa29.08■■■□□ 2.25
SDR39U1-221ENST00000556707 TTLL1O95922 423 aa29.07■■■□□ 2.24
SDR39U1-221ENST00000556707 RLFQ13129 1914 aa29.07■■■□□ 2.24
SDR39U1-221ENST00000556707 CATSPERGQ6ZRH7 1159 aa29.07■■■□□ 2.24
SDR39U1-221ENST00000556707 MAP4K1Q92918 833 aa29.07■■■□□ 2.24
SDR39U1-221ENST00000556707 MKL1Q969V6 931 aa29.07■■■□□ 2.24
SDR39U1-221ENST00000556707 P2RX7Q99572 595 aaKnown RBP29.07■■■□□ 2.24
SDR39U1-221ENST00000556707 RPAP3Q9H6T3 665 aaPredicted RBP29.07■■■□□ 2.24
SDR39U1-221ENST00000556707 GOPCQ9HD26 462 aa29.07■■■□□ 2.24
SDR39U1-221ENST00000556707 PARP14Q460N5 1801 aa29.06■■■□□ 2.24
SDR39U1-221ENST00000556707 GCLCP48506 637 aaPredicted RBP29.06■■■□□ 2.24
SDR39U1-221ENST00000556707 PPP4R3BQ5MIZ7 849 aa29.06■■■□□ 2.24
SDR39U1-221ENST00000556707 CD99L2Q8TCZ2 262 aa29.06■■■□□ 2.24
SDR39U1-221ENST00000556707 IL17RBQ9NRM6 502 aa29.06■■■□□ 2.24
SDR39U1-221ENST00000556707 DOCK3Q8IZD9 2030 aa29.05■■■□□ 2.24
SDR39U1-221ENST00000556707 NEDD4P46934 1319 aa29.05■■■□□ 2.24
SDR39U1-221ENST00000556707 NT5C2P49902 561 aa29.05■■■□□ 2.24
SDR39U1-221ENST00000556707 CTU1Q7Z7A3 348 aaKnown RBP29.05■■■□□ 2.24
SDR39U1-221ENST00000556707 SPICE1Q8N0Z3 855 aa29.05■■■□□ 2.24
SDR39U1-221ENST00000556707 LSG1Q9H089 658 aaKnown RBP29.05■■■□□ 2.24
SDR39U1-221ENST00000556707 SYNPO2Q9UMS6 1093 aa29.05■■■□□ 2.24
SDR39U1-221ENST00000556707 ZSWIM8A7E2V4 1837 aa29.05■■■□□ 2.24
SDR39U1-221ENST00000556707 HERVK_113P62684 666 aa29.04■■■□□ 2.24
SDR39U1-221ENST00000556707 LACTBP83111 547 aaPredicted RBP29.04■■■□□ 2.24
SDR39U1-221ENST00000556707 ESR2Q92731 530 aa29.04■■■□□ 2.24
SDR39U1-221ENST00000556707 WDR46O15213 610 aaKnown RBP29.03■■■□□ 2.24
SDR39U1-221ENST00000556707 NMT2O60551 498 aa29.03■■■□□ 2.24
SDR39U1-221ENST00000556707 ANKRD13CQ8N6S4 541 aa29.03■■■□□ 2.24
SDR39U1-221ENST00000556707 TCP11L1Q9NUJ3 509 aa29.03■■■□□ 2.24
SDR39U1-221ENST00000556707 RBM8AQ9Y5S9 174 aaKnown RBP29.03■■■□□ 2.24
SDR39U1-221ENST00000556707 CYP21A2P08686 494 aa29.02■■■□□ 2.24
SDR39U1-221ENST00000556707 CAP1Q01518 475 aa29.02■■■□□ 2.24
SDR39U1-221ENST00000556707 KIF22Q14807 665 aa29.02■■■□□ 2.24
SDR39U1-221ENST00000556707 FAM110CQ1W6H9 321 aa29.02■■■□□ 2.24
SDR39U1-221ENST00000556707 NKX2-3Q8TAU0 364 aa29.02■■■□□ 2.24
SDR39U1-221ENST00000556707 GTF3C2Q8WUA4 911 aaPredicted RBP29.02■■■□□ 2.24
SDR39U1-221ENST00000556707 TANGO6Q9C0B7 1094 aa29.02■■■□□ 2.24
SDR39U1-221ENST00000556707 ANO2Q9NQ90 1003 aa29.02■■■□□ 2.24
SDR39U1-221ENST00000556707 F5H6K3 240 aa29.01■■■□□ 2.23
SDR39U1-221ENST00000556707 RAD21O60216 631 aa29.01■■■□□ 2.23
SDR39U1-221ENST00000556707 NOVP48745 357 aa29.01■■■□□ 2.23
SDR39U1-221ENST00000556707 KLRC3Q07444 240 aa29.01■■■□□ 2.23
SDR39U1-221ENST00000556707 ARHGEF6Q15052 776 aa29.01■■■□□ 2.23
SDR39U1-221ENST00000556707 LRRC47Q8N1G4 583 aaKnown RBP29.01■■■□□ 2.23
SDR39U1-221ENST00000556707 CNNM2Q9H8M5 875 aa29.01■■■□□ 2.23
SDR39U1-221ENST00000556707 STX8Q9UNK0 236 aa29.01■■■□□ 2.23
SDR39U1-221ENST00000556707 GMCL1P1Q8NEA9 526 aa29■■■□□ 2.23
SDR39U1-221ENST00000556707 KRT23Q9C075 422 aa29■■■□□ 2.23
SDR39U1-221ENST00000556707 EFCC1Q9HA90 598 aa29■■■□□ 2.23
SDR39U1-221ENST00000556707 B4E1Z4 1266 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 KDM4AO75164 1064 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 NDUFB10O96000 172 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 COG2Q14746 738 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 LBX2Q6XYB7 198 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 OTOP1Q7RTM1 612 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 TNS4Q8IZW8 715 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 ARHGAP39Q9C0H5 1083 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 MORF4L1Q9UBU8 362 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 TRIM17Q9Y577 477 aa28.99■■■□□ 2.23
SDR39U1-221ENST00000556707 PKN2Q16513 984 aaKnown RBP28.98■■■□□ 2.23
SDR39U1-221ENST00000556707 MCOLN1Q9GZU1 580 aa28.98■■■□□ 2.23
SDR39U1-221ENST00000556707 HOXC10Q9NYD6 342 aa28.98■■■□□ 2.23
SDR39U1-221ENST00000556707 RBPJLQ9UBG7 517 aa28.98■■■□□ 2.23
SDR39U1-221ENST00000556707 SPDYE16A6NNV3 312 aaPredicted RBP28.97■■■□□ 2.23
SDR39U1-221ENST00000556707 PSMC4P43686 418 aa28.97■■■□□ 2.23
SDR39U1-221ENST00000556707 FAM83BQ5T0W9 1011 aa28.97■■■□□ 2.23
SDR39U1-221ENST00000556707 POTEEQ6S8J3 1075 aa28.97■■■□□ 2.23
SDR39U1-221ENST00000556707 TXNRD2Q9NNW7 524 aa28.97■■■□□ 2.23
SDR39U1-221ENST00000556707 COL11A1P12107 1806 aaPredicted RBP28.97■■■□□ 2.23
SDR39U1-221ENST00000556707 FLOT1O75955 427 aa28.96■■■□□ 2.23
SDR39U1-221ENST00000556707 CTGFP29279 349 aa28.96■■■□□ 2.23
SDR39U1-221ENST00000556707 IQCA1Q86XH1 822 aa28.96■■■□□ 2.23
SDR39U1-221ENST00000556707 TTC14Q96N46 770 aa28.96■■■□□ 2.23
SDR39U1-221ENST00000556707 NUP88Q99567 741 aaPredicted RBP28.96■■■□□ 2.23
SDR39U1-221ENST00000556707 ZSWIM5Q9P217 1185 aa28.96■■■□□ 2.23
SDR39U1-221ENST00000556707 RABGAP1Q9Y3P9 1069 aa28.96■■■□□ 2.23
SDR39U1-221ENST00000556707 TAF6LQ9Y6J9 622 aa28.96■■■□□ 2.23
SDR39U1-221ENST00000556707 A0A0G2JMZ2 1700 aa28.96■■■□□ 2.23
SDR39U1-221ENST00000556707 MYPNQ86TC9 1320 aa28.95■■■□□ 2.23
SDR39U1-221ENST00000556707 GNRH1P01148 92 aa28.95■■■□□ 2.22
SDR39U1-221ENST00000556707 DSG3P32926 999 aa28.95■■■□□ 2.22
SDR39U1-221ENST00000556707 TRDNQ13061 729 aa28.95■■■□□ 2.22
SDR39U1-221ENST00000556707 NECTIN1Q15223 517 aa28.95■■■□□ 2.22
SDR39U1-221ENST00000556707 CCDC178Q5BJE1 867 aa28.95■■■□□ 2.22
SDR39U1-221ENST00000556707 SLFN13Q68D06 897 aa28.95■■■□□ 2.22
SDR39U1-221ENST00000556707 GPRC5AQ8NFJ5 357 aa28.95■■■□□ 2.22
SDR39U1-221ENST00000556707 TRIM47Q96LD4 638 aa28.95■■■□□ 2.22
SDR39U1-221ENST00000556707 PAGR1Q9BTK6 254 aa28.95■■■□□ 2.22
SDR39U1-221ENST00000556707 E7EWF7 191 aa28.94■■■□□ 2.22
SDR39U1-221ENST00000556707 PEX10O60683 326 aa28.94■■■□□ 2.22
SDR39U1-221ENST00000556707 ECM2O94769 699 aaPredicted RBP28.94■■■□□ 2.22
SDR39U1-221ENST00000556707 TOP1P11387 765 aaKnown RBP28.94■■■□□ 2.22
SDR39U1-221ENST00000556707 FCGRTP55899 365 aa28.94■■■□□ 2.22
SDR39U1-221ENST00000556707 ERVK-9P63128 1117 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms