RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 RBM6P78332 1123 aaKnown RBP11.61□□□□□ -0.55
TMEM260-211ENST00000556648 MDM2Q00987 491 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-211ENST00000556648 ZRSR1Q15695 479 aaKnown RBP11.61□□□□□ -0.55
TMEM260-211ENST00000556648 PFKFB3Q16875 520 aaPredicted RBP11.61□□□□□ -0.55
TMEM260-211ENST00000556648 TYW1BQ6NUM6 668 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 DGKHQ86XP1 1220 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 SP8Q8IXZ3 490 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 CERS5Q8N5B7 392 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 PDILTQ8N807 584 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 CACTINQ8WUQ7 758 aaKnown RBP11.61□□□□□ -0.55
TMEM260-211ENST00000556648 ANKS1AQ92625 1134 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 MRFAP1L1Q96HT8 127 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 HSD3B7Q9H2F3 369 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 CPVLQ9H3G5 476 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 MAD2L2Q9UI95 211 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 DAGLAQ9Y4D2 1042 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 PCDHA5Q9Y5H7 936 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 SRPRBQ9Y5M8 271 aaKnown RBP11.61□□□□□ -0.55
TMEM260-211ENST00000556648 GAKO14976 1311 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 FAM205AQ6ZU69 1335 aa11.61□□□□□ -0.55
TMEM260-211ENST00000556648 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
TMEM260-211ENST00000556648 TPM3P06753 285 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 SRGNP10124 158 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 CDK8P49336 464 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 DOK7Q18PE1 504 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 TMEM47Q9BQJ4 181 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 FAM13BQ9NYF5 915 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 ATP6V0A2Q9Y487 856 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 CYTH3O43739 400 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 APBA3O96018 575 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 MMP10P09238 476 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 GOLGA8HP0CJ92 632 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 NLRP5P59047 1200 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 TTC38Q5R3I4 469 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 PIK3AP1Q6ZUJ8 805 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 C16orf86Q6ZW13 317 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 AMOTL1Q8IY63 956 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 ZNF444Q8N0Y2 327 aaPredicted RBP11.6□□□□□ -0.55
TMEM260-211ENST00000556648 RASGRP4Q8TDF6 673 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 EPSTI1Q96J88 318 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 MAN1B1Q9UKM7 699 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 STX8Q9UNK0 236 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
TMEM260-211ENST00000556648 KIF5BP33176 963 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 PICALMQ13492 652 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
TMEM260-211ENST00000556648 EYA3Q99504 573 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 TCP11L1Q9NUJ3 509 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 IFNKQ9P0W0 207 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 CEP131Q9UPN4 1083 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 IGSF3O75054 1194 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 ATP1A3P13637 1013 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
TMEM260-211ENST00000556648 POSTNQ15063 836 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 WWC2Q6AWC2 1192 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 SYMPKQ92797 1274 aaKnown RBP11.59□□□□□ -0.55
TMEM260-211ENST00000556648 DHX58Q96C10 678 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 FAM163AQ96GL9 167 aaPredicted RBP11.59□□□□□ -0.55
TMEM260-211ENST00000556648 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
TMEM260-211ENST00000556648 BRMS1Q9HCU9 246 aa11.59□□□□□ -0.55
TMEM260-211ENST00000556648 DDX4Q9NQI0 724 aaKnown RBP11.59□□□□□ -0.55
TMEM260-211ENST00000556648 SMC2O95347 1197 aa11.58□□□□□ -0.56
TMEM260-211ENST00000556648 NPR1P16066 1061 aa11.58□□□□□ -0.56
TMEM260-211ENST00000556648 CASP1P29466 404 aa11.58□□□□□ -0.56
TMEM260-211ENST00000556648 SCNN1DP51172 638 aa11.58□□□□□ -0.56
TMEM260-211ENST00000556648 IL17AQ16552 155 aa11.58□□□□□ -0.56
TMEM260-211ENST00000556648 DNTTIP2Q5QJE6 756 aaKnown RBP11.58□□□□□ -0.56
TMEM260-211ENST00000556648 FILIP1Q7Z7B0 1213 aa11.58□□□□□ -0.56
TMEM260-211ENST00000556648 CLEC10AQ8IUN9 316 aa11.58□□□□□ -0.56
TMEM260-211ENST00000556648 TBC1D22AQ8WUA7 517 aa11.58□□□□□ -0.56
TMEM260-211ENST00000556648 TNS1Q9HBL0 1735 aaKnown RBP11.57□□□□□ -0.56
TMEM260-211ENST00000556648 VWA3AA6NCI4 1184 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 SLURP2P0DP57 97 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 MCM7P33993 719 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 ATP2C1P98194 919 aaPredicted RBP11.57□□□□□ -0.56
TMEM260-211ENST00000556648 PTGDRQ13258 359 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 DPF2Q92785 391 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 CEP95Q96GE4 821 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 COA1Q9GZY4 146 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
TMEM260-211ENST00000556648 STXBP3O00186 592 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 PLCG2P16885 1265 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 FMR1Q06787 632 aaKnown RBP eCLIP11.57□□□□□ -0.56
TMEM260-211ENST00000556648 PTPN21Q16825 1174 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 USP17L2Q6R6M4 530 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 DPP8Q6V1X1 898 aaPredicted RBP11.57□□□□□ -0.56
TMEM260-211ENST00000556648 TMC4Q7Z404 712 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 HEATR3Q7Z4Q2 680 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 BLIDQ8IZY5 108 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 NLGN1Q8N2Q7 840 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 NEDD1Q8NHV4 660 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 KCNQ5Q9NR82 932 aa11.57□□□□□ -0.56
TMEM260-211ENST00000556648 UQCRHLA0A096LP55 91 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 SMTNL1A8MU46 457 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 IKBKBO14920 756 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 PLSCR1O15162 318 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 UQCRHP07919 91 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 TPM2P07951 284 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 AFMP43652 599 aa11.56□□□□□ -0.56
TMEM260-211ENST00000556648 SARSP49591 514 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms