RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 RANBP6O60518 1105 aaKnown RBP9.65□□□□□ -0.86
MARK3-210ENST00000556463 MFAP3LO75121 409 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 CAPN15O75808 1086 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 ZFYP08048 801 aaPredicted RBP9.65□□□□□ -0.86
MARK3-210ENST00000556463 SLC9C2Q5TAH2 1124 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 CCDC181Q5TID7 509 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 UBE3BQ7Z3V4 1068 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 FMNL3Q8IVF7 1028 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
MARK3-210ENST00000556463 IGSF5Q9NSI5 407 aa9.65□□□□□ -0.86
MARK3-210ENST00000556463 ERLIN1O75477 346 aa9.65□□□□□ -0.87
MARK3-210ENST00000556463 ELF1P32519 619 aa9.65□□□□□ -0.87
MARK3-210ENST00000556463 TIMM10P62072 90 aa9.65□□□□□ -0.87
MARK3-210ENST00000556463 RBL2Q08999 1139 aa9.65□□□□□ -0.87
MARK3-210ENST00000556463 SNX1Q13596 522 aa9.65□□□□□ -0.87
MARK3-210ENST00000556463 NEDD9Q14511 834 aa9.65□□□□□ -0.87
MARK3-210ENST00000556463 IMMTQ16891 758 aaKnown RBP9.65□□□□□ -0.87
MARK3-210ENST00000556463 ZNF662Q6ZS27 426 aa9.65□□□□□ -0.87
MARK3-210ENST00000556463 SGMS1Q86VZ5 419 aa9.65□□□□□ -0.87
MARK3-210ENST00000556463 NUP133Q8WUM0 1156 aa9.65□□□□□ -0.87
MARK3-210ENST00000556463 SAMSN1Q9NSI8 373 aaKnown RBP9.65□□□□□ -0.87
MARK3-210ENST00000556463 SPATS2LQ9NUQ6 558 aaKnown RBP9.65□□□□□ -0.87
MARK3-210ENST00000556463 TEX33O43247 280 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 PPFIA4O75335 1185 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 IGDCC4Q8TDY8 1250 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 MICAL1Q8TDZ2 1067 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 ALG1Q9BT22 464 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 GNL3LQ9NVN8 582 aaKnown RBP9.64□□□□□ -0.87
MARK3-210ENST00000556463 PHF8Q9UPP1 1060 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 UBN2Q6ZU65 1347 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 FER1L4A9Z1Z3 1794 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 CHD4Q14839 1912 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 A0A1B0GUA9 196 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 ABL1P00519 1130 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 LMBR1LQ6UX01 489 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 CEP120Q8N960 986 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 PLBD2Q8NHP8 589 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 KIF9Q9HAQ2 790 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 DACH1Q9UI36 760 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
MARK3-210ENST00000556463 MYO1FO00160 1098 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 GYPCP04921 128 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 KCNA6P17658 529 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 PIP4K2BP78356 416 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 NBPF20Q3BBV1 942 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 TTC39AQ5SRH9 613 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 TRAPPC11Q7Z392 1133 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 GBP3Q9H0R5 595 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 ANGEL1Q9UNK9 670 aaKnown RBP9.64□□□□□ -0.87
MARK3-210ENST00000556463 EID1Q9Y6B2 187 aa9.64□□□□□ -0.87
MARK3-210ENST00000556463 MYH8P13535 1937 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 EYA2O00167 538 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 GRIN1Q05586 938 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 SPATA1Q5VX52 437 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 APOA5Q6Q788 366 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 CYB5R4Q7L1T6 521 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 APPBP2Q92624 585 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 PUS7LQ9H0K6 701 aaKnown RBP9.63□□□□□ -0.87
MARK3-210ENST00000556463 GOPCQ9HD26 462 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 DOCK2Q92608 1830 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 A0A087WZG4 1122 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 TARSL2A2RTX5 802 aaKnown RBP9.63□□□□□ -0.87
MARK3-210ENST00000556463 KIF5CO60282 957 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 CDKL5O76039 1030 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 GSCP56915 257 aaPredicted RBP9.63□□□□□ -0.87
MARK3-210ENST00000556463 ERVK-24P63145 666 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 NOA1Q8NC60 698 aaKnown RBP9.63□□□□□ -0.87
MARK3-210ENST00000556463 ZNF496Q96IT1 587 aaPredicted RBP9.63□□□□□ -0.87
MARK3-210ENST00000556463 CTAGE9A4FU28 777 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 IFIT1P09914 478 aaKnown RBP9.63□□□□□ -0.87
MARK3-210ENST00000556463 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
MARK3-210ENST00000556463 EIF5P55010 431 aaKnown RBP9.63□□□□□ -0.87
MARK3-210ENST00000556463 KIF4BQ2VIQ3 1234 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 SLC35F6Q8N357 371 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 BCAS4Q8TDM0 211 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 TBC1D31Q96DN5 1066 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
MARK3-210ENST00000556463 SRPRBQ9Y5M8 271 aaKnown RBP9.63□□□□□ -0.87
MARK3-210ENST00000556463 CDHR2Q9BYE9 1310 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 AGPSO00116 658 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 PSMD14O00487 310 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 TFRCP02786 760 aaKnown RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 MYL6BP14649 208 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 CD44P16070 742 aaKnown RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 LRRC24Q50LG9 513 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 NOSTRINQ8IVI9 506 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 LZTFL1Q9NQ48 299 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.62□□□□□ -0.872e-7■■■■■ 28.3
MARK3-210ENST00000556463 DENND2AQ9ULE3 1009 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 HPCAL4Q9UM19 191 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 AXIN2Q9Y2T1 843 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 FAM169AQ9Y6X4 670 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 PPP1R3GB7ZBB8 358 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 SNRPA1P09661 255 aaKnown RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 RANBP1P43487 201 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 USP14P54578 494 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 KANK3Q6NY19 840 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 AFAP1L1Q8TED9 768 aa9.62□□□□□ -0.87
MARK3-210ENST00000556463 ZNF512BQ96KM6 892 aaPredicted RBP9.62□□□□□ -0.87
MARK3-210ENST00000556463 NAPGQ99747 312 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms