RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PDE3AQ14432 1141 aa16.08■□□□□ 0.16
TGFB3-204ENST00000556285 CLEC10AQ8IUN9 316 aa16.08■□□□□ 0.16
TGFB3-204ENST00000556285 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
TGFB3-204ENST00000556285 GTF3C2Q8WUA4 911 aaPredicted RBP16.08■□□□□ 0.16
TGFB3-204ENST00000556285 PAG1Q9NWQ8 432 aa16.08■□□□□ 0.16
TGFB3-204ENST00000556285 LAMA2P24043 3122 aaKnown RBP16.07■□□□□ 0.16
TGFB3-204ENST00000556285 SPDYE16A6NNV3 312 aaPredicted RBP16.07■□□□□ 0.16
TGFB3-204ENST00000556285 COL6A1P12109 1028 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 CAPN2P17655 700 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 ATP5JP18859 108 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 ADD2P35612 726 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 RGS2P41220 211 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 MAGEA10P43363 369 aaPredicted RBP16.07■□□□□ 0.16
TGFB3-204ENST00000556285 USP14P54578 494 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 WDR78Q5VTH9 848 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 Q7L0L9 218 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 SIAH1Q8IUQ4 282 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 NBPF3Q9H094 633 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 ZNF236Q9UL36 1845 aa16.07■□□□□ 0.16
TGFB3-204ENST00000556285 A0A1W2PPC1 479 aa16.06■□□□□ 0.16
TGFB3-204ENST00000556285 MAP2K5Q13163 448 aa16.06■□□□□ 0.16
TGFB3-204ENST00000556285 LRRC26Q2I0M4 334 aa16.06■□□□□ 0.16
TGFB3-204ENST00000556285 LBX2Q6XYB7 198 aa16.06■□□□□ 0.16
TGFB3-204ENST00000556285 APBA2Q99767 749 aa16.06■□□□□ 0.16
TGFB3-204ENST00000556285 HAUS7Q99871 368 aa16.06■□□□□ 0.16
TGFB3-204ENST00000556285 PLXNA1Q9UIW2 1896 aa16.05■□□□□ 0.16
TGFB3-204ENST00000556285 AKR1B1P15121 316 aa16.05■□□□□ 0.16
TGFB3-204ENST00000556285 PTPREP23469 700 aa16.05■□□□□ 0.16
TGFB3-204ENST00000556285 BMP8BP34820 402 aa16.05■□□□□ 0.16
TGFB3-204ENST00000556285 NPLOC4Q8TAT6 608 aa16.05■□□□□ 0.16
TGFB3-204ENST00000556285 CWC22Q9HCG8 908 aaKnown RBP16.05■□□□□ 0.16
TGFB3-204ENST00000556285 SMCHD1A6NHR9 2005 aa16.05■□□□□ 0.16
TGFB3-204ENST00000556285 TRMT44Q8IYL2 757 aaKnown RBP16.04■□□□□ 0.16
TGFB3-204ENST00000556285 TRPV1Q8NER1 839 aa16.04■□□□□ 0.16
TGFB3-204ENST00000556285 RNF216Q9NWF9 866 aaPredicted RBP16.04■□□□□ 0.16
TGFB3-204ENST00000556285 SLC15A5A6NIM6 579 aa16.03■□□□□ 0.16
TGFB3-204ENST00000556285 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
TGFB3-204ENST00000556285 USP17L21D6R901 530 aa16.03■□□□□ 0.16
TGFB3-204ENST00000556285 CCNA1P78396 465 aa16.03■□□□□ 0.16
TGFB3-204ENST00000556285 C12orf60Q5U649 245 aa16.03■□□□□ 0.16
TGFB3-204ENST00000556285 TMEM179Q6ZVK1 233 aa16.03■□□□□ 0.16
TGFB3-204ENST00000556285 SPICE1Q8N0Z3 855 aa16.03■□□□□ 0.16
TGFB3-204ENST00000556285 MOV10L1Q9BXT6 1211 aaKnown RBP16.03■□□□□ 0.16
TGFB3-204ENST00000556285 TANGO6Q9C0B7 1094 aa16.03■□□□□ 0.16
TGFB3-204ENST00000556285 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
TGFB3-204ENST00000556285 IGHA2P01877 340 aa16.02■□□□□ 0.16
TGFB3-204ENST00000556285 CYP2C19P33261 490 aa16.02■□□□□ 0.16
TGFB3-204ENST00000556285 CDK8P49336 464 aa16.02■□□□□ 0.16
TGFB3-204ENST00000556285 GRB14Q14449 540 aa16.02■□□□□ 0.16
TGFB3-204ENST00000556285 COG2Q14746 738 aa16.02■□□□□ 0.16
TGFB3-204ENST00000556285 LRRCC1Q9C099 1032 aa16.02■□□□□ 0.16
TGFB3-204ENST00000556285 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.16
TGFB3-204ENST00000556285 ATP8A2Q9NTI2 1148 aa16.02■□□□□ 0.16
TGFB3-204ENST00000556285 SWAP70Q9UH65 585 aa16.02■□□□□ 0.16
TGFB3-204ENST00000556285 SLC4A4Q9Y6R1 1079 aa16.02■□□□□ 0.16
TGFB3-204ENST00000556285 GREB1LQ9C091 1923 aaPredicted RBP16.02■□□□□ 0.15
TGFB3-204ENST00000556285 EYSQ5T1H1 3165 aa16.01■□□□□ 0.15
TGFB3-204ENST00000556285 GLRX3O76003 335 aaKnown RBP16.01■□□□□ 0.15
TGFB3-204ENST00000556285 HOXC6P09630 235 aa16.01■□□□□ 0.15
TGFB3-204ENST00000556285 MDM2Q00987 491 aaPredicted RBP16.01■□□□□ 0.15
TGFB3-204ENST00000556285 UBE3CQ15386 1083 aa16.01■□□□□ 0.15
TGFB3-204ENST00000556285 TSHZ3Q63HK5 1081 aa16.01■□□□□ 0.15
TGFB3-204ENST00000556285 TMX2Q9Y320 296 aa16.01■□□□□ 0.15
TGFB3-204ENST00000556285 UNC80Q8N2C7 3258 aa16■□□□□ 0.15
TGFB3-204ENST00000556285 ATP2B2Q01814 1243 aa16■□□□□ 0.15
TGFB3-204ENST00000556285 ICA1Q05084 483 aa16■□□□□ 0.15
TGFB3-204ENST00000556285 MFSD14CQ5VZR4 134 aa16■□□□□ 0.15
TGFB3-204ENST00000556285 CTR9Q6PD62 1173 aa16■□□□□ 0.15
TGFB3-204ENST00000556285 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
TGFB3-204ENST00000556285 ATG4CQ96DT6 458 aa16■□□□□ 0.15
TGFB3-204ENST00000556285 SPATC1LQ9H0A9 340 aa16■□□□□ 0.15
TGFB3-204ENST00000556285 CHMP4BQ9H444 224 aaKnown RBP16■□□□□ 0.15
TGFB3-204ENST00000556285 HOXC10Q9NYD6 342 aa16■□□□□ 0.15
TGFB3-204ENST00000556285 IVNS1ABPQ9Y6Y0 642 aa16■□□□□ 0.15
TGFB3-204ENST00000556285 COBLO75128 1261 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 EEF2P13639 858 aaKnown RBP15.99■□□□□ 0.15
TGFB3-204ENST00000556285 ERCC3P19447 782 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 ADORA2AP29274 412 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 CNGA1P29973 690 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 DSG3P32926 999 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 ANO1Q5XXA6 986 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 C16orf86Q6ZW13 317 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 TDHQ8IZJ6 230 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 SLC17A8Q8NDX2 589 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 VCPKMTQ9H867 229 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 ARHGEF10LQ9HCE6 1279 aa15.99■□□□□ 0.15
TGFB3-204ENST00000556285 FLOT1O75955 427 aa15.98■□□□□ 0.15
TGFB3-204ENST00000556285 PLS1Q14651 629 aa15.98■□□□□ 0.15
TGFB3-204ENST00000556285 LRIT3Q3SXY7 679 aa15.98■□□□□ 0.15
TGFB3-204ENST00000556285 STK11IPQ8N1F8 1099 aa15.98■□□□□ 0.15
TGFB3-204ENST00000556285 DEFB123Q8N688 67 aa15.98■□□□□ 0.15
TGFB3-204ENST00000556285 CCDC17Q96LX7 622 aa15.98■□□□□ 0.15
TGFB3-204ENST00000556285 STRBPQ96SI9 672 aaKnown RBP15.98■□□□□ 0.15
TGFB3-204ENST00000556285 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.98■□□□□ 0.15
TGFB3-204ENST00000556285 UBE2OQ9C0C9 1292 aaKnown RBP15.98■□□□□ 0.15
TGFB3-204ENST00000556285 ECHDC1Q9NTX5 307 aa15.98■□□□□ 0.15
TGFB3-204ENST00000556285 FBXO28Q9NVF7 368 aa15.98■□□□□ 0.15
TGFB3-204ENST00000556285 DDX20Q9UHI6 824 aaKnown RBP15.98■□□□□ 0.15
TGFB3-204ENST00000556285 A0A0C4DFX4 3053 aa15.97■□□□□ 0.15
TGFB3-204ENST00000556285 GSG1L2A8MUP6 293 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms