RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CYP2C19P33261 490 aa17.43■□□□□ 0.38
CHMP4BP1-201ENST00000556017 CCNA1P78396 465 aa17.43■□□□□ 0.38
CHMP4BP1-201ENST00000556017 EYSQ5T1H1 3165 aa17.43■□□□□ 0.38
CHMP4BP1-201ENST00000556017 GOLIM4O00461 696 aa17.42■□□□□ 0.38
CHMP4BP1-201ENST00000556017 PRKAB2O43741 272 aa17.42■□□□□ 0.38
CHMP4BP1-201ENST00000556017 POLR3DP05423 398 aaPredicted RBP17.42■□□□□ 0.38
CHMP4BP1-201ENST00000556017 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
CHMP4BP1-201ENST00000556017 DYNLL2Q96FJ2 89 aa17.42■□□□□ 0.38
CHMP4BP1-201ENST00000556017 CRNKL1Q9BZJ0 848 aaKnown RBP17.42■□□□□ 0.38
CHMP4BP1-201ENST00000556017 CABP5Q9NP86 173 aa17.42■□□□□ 0.38
CHMP4BP1-201ENST00000556017 MCM9Q9NXL9 1143 aa17.42■□□□□ 0.38
CHMP4BP1-201ENST00000556017 DDX20Q9UHI6 824 aaKnown RBP17.42■□□□□ 0.38
CHMP4BP1-201ENST00000556017 COBLO75128 1261 aa17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 COG2Q14746 738 aa17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 TTF1Q15361 905 aaPredicted RBP17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 WDR78Q5VTH9 848 aa17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 MFSD14CQ5VZR4 134 aa17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 UBE2OQ9C0C9 1292 aaKnown RBP17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 SPATC1LQ9H0A9 340 aa17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 ARMT1Q9H993 441 aa17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 ZBTB40Q9NUA8 1239 aa17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 MTMR10Q9NXD2 777 aa17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 PLXNA1Q9UIW2 1896 aa17.41■□□□□ 0.38
CHMP4BP1-201ENST00000556017 CDH23Q9H251 3354 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 CYP2D7A0A087X1C5 515 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 GLRX3O76003 335 aaKnown RBP17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 AKR1B1P15121 316 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 ADORA2AP29274 412 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 ADD2P35612 726 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 MDM2Q00987 491 aaPredicted RBP17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 DEFB123Q8N688 67 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 SLC17A8Q8NDX2 589 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 LPAR1Q92633 364 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 KIF1BPQ96EK5 621 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 SENP6Q9GZR1 1112 aaPredicted RBP17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 ZBED9Q6R2W3 1325 aa17.4■□□□□ 0.38
CHMP4BP1-201ENST00000556017 APBB1O00213 710 aa17.39■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ERCC3P19447 782 aa17.39■□□□□ 0.37
CHMP4BP1-201ENST00000556017 DSG3P32926 999 aa17.39■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ATP2B2Q01814 1243 aa17.39■□□□□ 0.37
CHMP4BP1-201ENST00000556017 OLFML2BQ68BL8 750 aa17.39■□□□□ 0.37
CHMP4BP1-201ENST00000556017 DNAJC2Q99543 621 aaKnown RBP17.39■□□□□ 0.37
CHMP4BP1-201ENST00000556017 TMX2Q9Y320 296 aa17.39■□□□□ 0.37
CHMP4BP1-201ENST00000556017 MPHOSPH10O00566 681 aaKnown RBP17.38■□□□□ 0.37
CHMP4BP1-201ENST00000556017 HSP90AB4PQ58FF6 505 aa17.38■□□□□ 0.37
CHMP4BP1-201ENST00000556017 TMEM179Q6ZVK1 233 aa17.38■□□□□ 0.37
CHMP4BP1-201ENST00000556017 RPAP2Q8IXW5 612 aaPredicted RBP17.38■□□□□ 0.37
CHMP4BP1-201ENST00000556017 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
CHMP4BP1-201ENST00000556017 SHCBP1Q8NEM2 672 aa17.38■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ATG4CQ96DT6 458 aa17.38■□□□□ 0.37
CHMP4BP1-201ENST00000556017 HOXC10Q9NYD6 342 aa17.38■□□□□ 0.37
CHMP4BP1-201ENST00000556017 IVNS1ABPQ9Y6Y0 642 aa17.38■□□□□ 0.37
CHMP4BP1-201ENST00000556017 POTEB2H3BUK9 544 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 DNM1LO00429 736 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 MBD4O95243 580 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ATP5JP18859 108 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ATN1P54259 1190 aaPredicted RBP17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 C12orf60Q5U649 245 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 SPICE1Q8N0Z3 855 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 TANGO6Q9C0B7 1094 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 VCPKMTQ9H867 229 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ADAMTS5Q9UNA0 930 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 COG6Q9Y2V7 657 aa17.37■□□□□ 0.37
CHMP4BP1-201ENST00000556017 VCANP13611 3396 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 STRNO43815 780 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 MSCO60682 206 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 CNGA1P29973 690 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 CDK8P49336 464 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 SNX17Q15036 470 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 PRAMEF19Q5SWL8 479 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 GJC2Q5T442 439 aaPredicted RBP17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ANO1Q5XXA6 986 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 HAUS7Q99871 368 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 FBXO28Q9NVF7 368 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 PAG1Q9NWQ8 432 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 SWAP70Q9UH65 585 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 STXBP5LQ9Y2K9 1186 aa17.36■□□□□ 0.37
CHMP4BP1-201ENST00000556017 SPTBN5Q9NRC6 3674 aaKnown RBP17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 USP17L12C9JPN9 530 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 USP17L21D6R901 530 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 DLL1O00548 723 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 IFIT2P09913 472 aaKnown RBP17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 RTP1P59025 263 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 TMEM132BQ14DG7 1078 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 C16orf86Q6ZW13 317 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 DPP9Q86TI2 863 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 MAML3Q96JK9 1138 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ATP8A2Q9NTI2 1148 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 PRUNE2Q8WUY3 3088 aa17.35■□□□□ 0.37
CHMP4BP1-201ENST00000556017 SEPT4O43236 478 aa17.34■□□□□ 0.37
CHMP4BP1-201ENST00000556017 RAB11FIP3O75154 756 aa17.34■□□□□ 0.37
CHMP4BP1-201ENST00000556017 FLOT1O75955 427 aa17.34■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ICA1Q05084 483 aa17.34■□□□□ 0.37
CHMP4BP1-201ENST00000556017 SLC39A5Q6ZMH5 540 aa17.34■□□□□ 0.37
CHMP4BP1-201ENST00000556017 ABRAQ8N0Z2 381 aa17.34■□□□□ 0.37
CHMP4BP1-201ENST00000556017 MB21D1Q8N884 522 aa17.34■□□□□ 0.37
CHMP4BP1-201ENST00000556017 REPS2Q8NFH8 660 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms