RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 TRIM14Q14142 442 aa18.09■□□□□ 0.49
MARK3-209ENST00000555235 AKNAD1Q5T1N1 836 aa18.09■□□□□ 0.49
MARK3-209ENST00000555235 NOA1Q8NC60 698 aaKnown RBP18.09■□□□□ 0.49
MARK3-209ENST00000555235 ACRBPQ8NEB7 543 aa18.09■□□□□ 0.49
MARK3-209ENST00000555235 KRT23Q9C075 422 aa18.09■□□□□ 0.49
MARK3-209ENST00000555235 KCNJ14Q9UNX9 436 aa18.09■□□□□ 0.49
MARK3-209ENST00000555235 TIAM2Q8IVF5 1701 aa18.08■□□□□ 0.49
MARK3-209ENST00000555235 UBAP1LF5GYI3 381 aa18.08■□□□□ 0.48
MARK3-209ENST00000555235 TOM1O60784 492 aa18.08■□□□□ 0.48
MARK3-209ENST00000555235 MBD4O95243 580 aa18.08■□□□□ 0.48
MARK3-209ENST00000555235 CPP00450 1065 aa18.08■□□□□ 0.48
MARK3-209ENST00000555235 DNAJC21Q5F1R6 531 aaKnown RBP18.08■□□□□ 0.48
MARK3-209ENST00000555235 TRIM22Q8IYM9 498 aa18.08■□□□□ 0.48
MARK3-209ENST00000555235 LPIN2Q92539 896 aa18.08■□□□□ 0.48
MARK3-209ENST00000555235 FXR1P51114 621 aaKnown RBP eCLIP18.07■□□□□ 0.48
MARK3-209ENST00000555235 PUM3Q15397 648 aaKnown RBP18.07■□□□□ 0.48
MARK3-209ENST00000555235 PIGBQ92521 554 aa18.07■□□□□ 0.48
MARK3-209ENST00000555235 ABHD10Q9NUJ1 306 aa18.07■□□□□ 0.48
MARK3-209ENST00000555235 GSG1L2A8MUP6 293 aa18.07■□□□□ 0.48
MARK3-209ENST00000555235 ARHGAP25P42331 645 aa18.07■□□□□ 0.48
MARK3-209ENST00000555235 RTN1Q16799 776 aa18.07■□□□□ 0.48
MARK3-209ENST00000555235 KLHL10Q6JEL2 608 aa18.07■□□□□ 0.48
MARK3-209ENST00000555235 MAGEB6Q8N7X4 407 aa18.07■□□□□ 0.48
MARK3-209ENST00000555235 SPATA5Q8NB90 893 aa18.07■□□□□ 0.48
MARK3-209ENST00000555235 GSDMAQ96QA5 445 aa18.07■□□□□ 0.48
MARK3-209ENST00000555235 GEMIN8Q9NWZ8 242 aaKnown RBP18.07■□□□□ 0.48
MARK3-209ENST00000555235 PDE8AO60658 829 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 PRPF6O94906 941 aaKnown RBP18.06■□□□□ 0.48
MARK3-209ENST00000555235 ERVK-24P63145 666 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 MFSD6Q6ZSS7 791 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 BRINP3Q76B58 766 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 ARMT1Q9H993 441 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 SEC31BQ9NQW1 1179 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 TRMT112Q9UI30 125 aaKnown RBP18.06■□□□□ 0.48
MARK3-209ENST00000555235 PCDHB6Q9Y5E3 794 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 SYF2O95926 243 aaKnown RBP18.06■□□□□ 0.48
MARK3-209ENST00000555235 TFRCP02786 760 aaKnown RBP18.06■□□□□ 0.48
MARK3-209ENST00000555235 GUCY2CP25092 1073 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 USP14P54578 494 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 EIF5P55010 431 aaKnown RBP18.06■□□□□ 0.48
MARK3-209ENST00000555235 MAP3K12Q12852 859 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 CRACR2BQ8N4Y2 399 aaPredicted RBP18.06■□□□□ 0.48
MARK3-209ENST00000555235 STAG1Q8WVM7 1258 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 RPGRIP1Q96KN7 1286 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 CSRNP2Q9H175 543 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 AATFQ9NY61 560 aaKnown RBP eCLIP18.06■□□□□ 0.48
MARK3-209ENST00000555235 MYH3P11055 1940 aa18.06■□□□□ 0.48
MARK3-209ENST00000555235 TARSL2A2RTX5 802 aaKnown RBP18.05■□□□□ 0.48
MARK3-209ENST00000555235 DEXIO95424 95 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 CD44P16070 742 aaKnown RBP18.05■□□□□ 0.48
MARK3-209ENST00000555235 STX17P56962 302 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 STRN4Q9NRL3 753 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 MROH5Q6ZUA9 1318 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 LRP5O75197 1615 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 AKAP17AQ02040 695 aaKnown RBP18.05■□□□□ 0.48
MARK3-209ENST00000555235 SPAG1Q07617 926 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 NR5A1Q13285 461 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 WTAPQ15007 396 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 NCAPH2Q6IBW4 605 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 TRAPPC11Q7Z392 1133 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 HELBQ8NG08 1087 aaPredicted RBP18.05■□□□□ 0.48
MARK3-209ENST00000555235 MTA3Q9BTC8 594 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 DEF6Q9H4E7 631 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 HPCAL4Q9UM19 191 aa18.05■□□□□ 0.48
MARK3-209ENST00000555235 ARAP2Q8WZ64 1704 aa18.04■□□□□ 0.48
MARK3-209ENST00000555235 CHD4Q14839 1912 aa18.04■□□□□ 0.48
MARK3-209ENST00000555235 A0A087WUV0 522 aaPredicted RBP18.04■□□□□ 0.48
MARK3-209ENST00000555235 PRKAB2O43741 272 aa18.04■□□□□ 0.48
MARK3-209ENST00000555235 RASGRF1Q13972 1273 aa18.04■□□□□ 0.48
MARK3-209ENST00000555235 SH3RF1Q7Z6J0 888 aa18.04■□□□□ 0.48
MARK3-209ENST00000555235 TADA2BQ86TJ2 420 aa18.04■□□□□ 0.48
MARK3-209ENST00000555235 SMARCC1Q92922 1105 aaPredicted RBP18.04■□□□□ 0.48
MARK3-209ENST00000555235 NUP88Q99567 741 aaPredicted RBP18.04■□□□□ 0.48
MARK3-209ENST00000555235 LIMA1Q9UHB6 759 aaKnown RBP18.04■□□□□ 0.48
MARK3-209ENST00000555235 LRRC10BA6NIK2 292 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 PSMD14O00487 310 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 ATP2B1P20020 1258 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 RCAN1P53805 252 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 SART3Q15020 963 aaKnown RBP18.03■□□□□ 0.48
MARK3-209ENST00000555235 CERS3Q8IU89 383 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 SUGP1Q8IWZ8 645 aaKnown RBP18.03■□□□□ 0.48
MARK3-209ENST00000555235 ANKRD20A12PQ8NF67 263 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 OXER1Q8TDS5 423 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 COG1Q8WTW3 980 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 ZKSCAN3Q9BRR0 538 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 BCL9LQ86UU0 1499 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 DOCK2Q92608 1830 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 PPP1R3GB7ZBB8 358 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 N4BP3O15049 544 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 ABL1P00519 1130 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 SLC5A1P13866 664 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 RRP12Q5JTH9 1297 aaKnown RBP18.03■□□□□ 0.48
MARK3-209ENST00000555235 USP49Q70CQ1 688 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 ZBTB9Q96C00 473 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 PAGE5Q96GU1 130 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 HAUS4Q9H6D7 363 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 ANKRD36CQ5JPF3 1778 aa18.03■□□□□ 0.48
MARK3-209ENST00000555235 CCDC196A0A1B0GTZ2 297 aa18.02■□□□□ 0.48
MARK3-209ENST00000555235 SHOX2O60902 331 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms