RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 SEC31AO94979 1220 aaKnown RBP11.37□□□□□ -0.59
PRKCH-211ENST00000555082 CTDNEP1O95476 244 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 CXCL9Q07325 125 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 DPCR1Q3MIW9 517 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 NFXL1Q6ZNB6 911 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 MICU3Q86XE3 530 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 TDRD3Q9H7E2 651 aaKnown RBP11.37□□□□□ -0.59
PRKCH-211ENST00000555082 LY9Q9HBG7 655 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 DNAI1Q9UI46 699 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 ANAPC4Q9UJX5 808 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 KIAA1551Q9HCM1 1747 aa11.37□□□□□ -0.59
PRKCH-211ENST00000555082 PTPDC1A2A3K4 754 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 BMS1Q14692 1282 aaKnown RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 ZSCAN16Q9H4T2 348 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 FAM53CQ9NYF3 392 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 ARPP21Q9UBL0 812 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 RCOR1Q9UKL0 485 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 ANGEL1Q9UNK9 670 aaKnown RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 FHOD1Q9Y613 1164 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 FAM196BA6NMK8 535 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 HNRNPH2P55795 449 aaKnown RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 CFAP100Q494V2 611 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 NEK11Q8NG66 645 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 KRT23Q9C075 422 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 ZNRF3Q9ULT6 936 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 CCDC88AQ3V6T2 1871 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 CLRN2A0PK11 232 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 UBE2Q2LH0YL09 131 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 CTAGE5O15320 804 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 PFKFB2O60825 505 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 CAVIN2O95810 425 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 PLA2G4AP47712 749 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 FAM160A1Q05DH4 1040 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 ZRSR1Q15695 479 aaKnown RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 RSBN1LQ6PCB5 846 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 CMTR1Q8N1G2 835 aaKnown RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 NSUN7Q8NE18 718 aaKnown RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 ENGASEQ8NFI3 743 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 RNF41Q9H4P4 317 aaPredicted RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 ZCCHC17Q9NP64 241 aaKnown RBP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 SUGT1Q9Y2Z0 365 aa11.36□□□□□ -0.59
PRKCH-211ENST00000555082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.36□□□□□ -0.59
PRKCH-211ENST00000555082 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 KIF13BQ9NQT8 1826 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 PNMA6AP0CW24 399 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-211ENST00000555082 PDIA4P13667 645 aaKnown RBP11.35□□□□□ -0.59
PRKCH-211ENST00000555082 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-211ENST00000555082 CDC27P30260 824 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 SBK1Q52WX2 424 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 HHIPL2Q6UWX4 724 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 CCDC82Q8N4S0 544 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 ESR2Q92731 530 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 CNNM2Q9H8M5 875 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 PCDHA7Q9UN72 937 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 TNKSO95271 1327 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 H2AFXP16104 143 aaPredicted RBP11.35□□□□□ -0.59
PRKCH-211ENST00000555082 CAPN2P17655 700 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 SFPQP23246 707 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRKCH-211ENST00000555082 NDUFA8P51970 172 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 MTMR7Q9Y216 660 aa11.35□□□□□ -0.59
PRKCH-211ENST00000555082 MAST2Q6P0Q8 1798 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 URI1O94763 535 aaPredicted RBP11.34□□□□□ -0.59
PRKCH-211ENST00000555082 EGFRP00533 1210 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 VIL1P09327 827 aaKnown RBP11.34□□□□□ -0.59
PRKCH-211ENST00000555082 TFAP4Q01664 338 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 RBM26Q5T8P6 1007 aaKnown RBP11.34□□□□□ -0.59
PRKCH-211ENST00000555082 SOGA3Q5TF21 947 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 APOA5Q6Q788 366 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 ARHGAP27Q6ZUM4 889 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 ENAHQ8N8S7 591 aaPredicted RBP11.34□□□□□ -0.59
PRKCH-211ENST00000555082 NUP133Q8WUM0 1156 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 JDP2Q8WYK2 163 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 ZDHHC15Q96MV8 337 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 UBAC1Q9BSL1 405 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 MKNK2Q9HBH9 465 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 GJB4Q9NTQ9 266 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 TSPY2A6NKD2 308 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 PLCG2P16885 1265 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 GSDMDP57764 484 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 WTAPQ15007 396 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 SF3A1Q15459 793 aaKnown RBP11.34□□□□□ -0.59
PRKCH-211ENST00000555082 CLEC10AQ8IUN9 316 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 GMLQ99445 158 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 CALCOCO1Q9P1Z2 691 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 GJA3Q9Y6H8 435 aa11.34□□□□□ -0.59
PRKCH-211ENST00000555082 ATP1A3P13637 1013 aa11.33□□□□□ -0.6
PRKCH-211ENST00000555082 CDK8P49336 464 aa11.33□□□□□ -0.6
PRKCH-211ENST00000555082 SHROOM1Q2M3G4 852 aaPredicted RBP11.33□□□□□ -0.6
PRKCH-211ENST00000555082 HSP90AA4PQ58FG1 418 aa11.33□□□□□ -0.6
PRKCH-211ENST00000555082 ZNF274Q96GC6 653 aaPredicted RBP11.33□□□□□ -0.6
PRKCH-211ENST00000555082 TMEM87BQ96K49 555 aa11.33□□□□□ -0.6
PRKCH-211ENST00000555082 ZNF396Q96N95 335 aaPredicted RBP11.33□□□□□ -0.6
PRKCH-211ENST00000555082 SYT17Q9BSW7 474 aa11.33□□□□□ -0.6
PRKCH-211ENST00000555082 CARD6Q9BX69 1037 aa11.33□□□□□ -0.6
PRKCH-211ENST00000555082 FAM198AQ9UFP1 575 aa11.33□□□□□ -0.6
PRKCH-211ENST00000555082 CLIC4Q9Y696 253 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms