RNA–Protein interactions for RNA: ENST00000555047.1

APAF1-213, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 5

Gene APAF1, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-213ENST00000555047 TM9SF2Q99805 663 aa6.54□□□□□ -1.36
APAF1-213ENST00000555047 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
APAF1-213ENST00000555047 CNTNAP4Q9C0A0 1308 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 LOC105371045A0A1W2PR82 267 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
APAF1-213ENST00000555047 U2SURPO15042 1029 aaKnown RBP6.53□□□□□ -1.36
APAF1-213ENST00000555047 KLF4O43474 513 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 CASP7P55210 303 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 IKZF1Q13422 519 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 RAB33AQ14088 237 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 NFE2L2Q16236 605 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 CCDC81Q6ZN84 652 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 LRP10Q7Z4F1 713 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 TMEM40Q8WWA1 233 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 FMNL2Q96PY5 1086 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 DPH2Q9BQC3 489 aaPredicted RBP6.53□□□□□ -1.36
APAF1-213ENST00000555047 TRIM55Q9BYV6 548 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 RC3H2Q9HBD1 1191 aaKnown RBP6.53□□□□□ -1.36
APAF1-213ENST00000555047 MBNL3Q9NUK0 354 aaKnown RBP6.53□□□□□ -1.36
APAF1-213ENST00000555047 GMIPQ9P107 970 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 ADAMTS6Q9UKP5 1117 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 SLC12A7Q9Y666 1083 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 MRVI1Q9Y6F6 885 aa6.53□□□□□ -1.36
APAF1-213ENST00000555047 PRR33A8MZF0 331 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 SMAD7O15105 426 aaKnown RBP6.52□□□□□ -1.37
APAF1-213ENST00000555047 GRIN3BO60391 1043 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 RNASE1P07998 156 aaKnown RBP6.52□□□□□ -1.37
APAF1-213ENST00000555047 JUNBP17275 347 aaPredicted RBP6.52□□□□□ -1.37
APAF1-213ENST00000555047 ITGB5P18084 799 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 PLCG1P19174 1290 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 CLCN7P51798 805 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 SERINC3Q13530 473 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 CCDC144BQ3MJ40 725 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 CDKAL1Q5VV42 579 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 SLC6A19Q695T7 634 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 ZNF746Q6NUN9 644 aaPredicted RBP6.52□□□□□ -1.37
APAF1-213ENST00000555047 CDH24Q86UP0 819 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 LSRQ86X29 649 aaPredicted RBP6.52□□□□□ -1.37
APAF1-213ENST00000555047 MRPL41Q8IXM3 137 aaKnown RBP6.52□□□□□ -1.37
APAF1-213ENST00000555047 MFSD4AQ8N468 514 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 ASIC4Q96FT7 647 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 TMEM87BQ96K49 555 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 REV1Q9UBZ9 1251 aa6.52□□□□□ -1.37
APAF1-213ENST00000555047 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
APAF1-213ENST00000555047 BIN1O00499 593 aa6.51□□□□□ -1.37
APAF1-213ENST00000555047 CBX7O95931 251 aa6.51□□□□□ -1.37
APAF1-213ENST00000555047 CYP7A1P22680 504 aa6.51□□□□□ -1.37
APAF1-213ENST00000555047 CANXP27824 592 aaKnown RBP6.51□□□□□ -1.37
APAF1-213ENST00000555047 INTS3Q68E01 1043 aaKnown RBP6.51□□□□□ -1.37
APAF1-213ENST00000555047 HSPA12BQ96MM6 686 aa6.51□□□□□ -1.37
APAF1-213ENST00000555047 PRDM7Q9NQW5 492 aa6.51□□□□□ -1.37
APAF1-213ENST00000555047 ACTR10Q9NZ32 417 aa6.51□□□□□ -1.37
APAF1-213ENST00000555047 CORINQ9Y5Q5 1042 aa6.51□□□□□ -1.37
APAF1-213ENST00000555047 PITPNM2Q9BZ72 1349 aa6.5□□□□□ -1.37
APAF1-213ENST00000555047 ZNF865P0CJ78 1059 aaPredicted RBP6.5□□□□□ -1.37
APAF1-213ENST00000555047 GUCY2CP25092 1073 aa6.5□□□□□ -1.37
APAF1-213ENST00000555047 ZP2Q05996 745 aa6.5□□□□□ -1.37
APAF1-213ENST00000555047 CDCP2Q5VXM1 449 aa6.5□□□□□ -1.37
APAF1-213ENST00000555047 SLC23A3Q6PIS1 610 aa6.5□□□□□ -1.37
APAF1-213ENST00000555047 C22orf34Q6ZV56 151 aa6.5□□□□□ -1.37
APAF1-213ENST00000555047 MCATQ8IVS2 390 aaKnown RBP6.5□□□□□ -1.37
APAF1-213ENST00000555047 FAM169BQ8N8A8 192 aa6.5□□□□□ -1.37
APAF1-213ENST00000555047 LRRN4CLQ8ND94 238 aa6.5□□□□□ -1.37
APAF1-213ENST00000555047 ACSF2Q96CM8 615 aaPredicted RBP6.5□□□□□ -1.37
APAF1-213ENST00000555047 ZSWIM4Q9H7M6 989 aa6.5□□□□□ -1.37
APAF1-213ENST00000555047 H3BS24 57 aa6.49□□□□□ -1.37
APAF1-213ENST00000555047 TNFRSF10CO14798 259 aa6.49□□□□□ -1.37
APAF1-213ENST00000555047 PAPLNO95428 1278 aa6.49□□□□□ -1.37
APAF1-213ENST00000555047 CCNFP41002 786 aa6.49□□□□□ -1.37
APAF1-213ENST00000555047 YARSP54577 528 aaKnown RBP6.49□□□□□ -1.37
APAF1-213ENST00000555047 FXNQ16595 210 aa6.49□□□□□ -1.37
APAF1-213ENST00000555047 HNRNPLLQ8WVV9 542 aaKnown RBP6.49□□□□□ -1.37
APAF1-213ENST00000555047 CNNM2Q9H8M5 875 aa6.49□□□□□ -1.37
APAF1-213ENST00000555047 ATP13A1Q9HD20 1204 aa6.49□□□□□ -1.37
APAF1-213ENST00000555047 CAPN6Q9Y6Q1 641 aa6.49□□□□□ -1.37
APAF1-213ENST00000555047 SLC22A31A6NKX4 558 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 NME1P15531 152 aaKnown RBP6.48□□□□□ -1.37
APAF1-213ENST00000555047 ETV3P41162 512 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 OVOS1Q6IE37 1185 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 NLRC3Q7RTR2 1065 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 ATG4DQ86TL0 474 aaPredicted RBP6.48□□□□□ -1.37
APAF1-213ENST00000555047 SLFN12Q8IYM2 578 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 FAM13CQ8NE31 585 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 ATG4CQ96DT6 458 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 MRFAP1L1Q96HT8 127 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 COX4I2Q96KJ9 171 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 GOLGA2P5Q9HBQ8 144 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 SEMA3GQ9NS98 782 aa6.48□□□□□ -1.37
APAF1-213ENST00000555047 TMA7Q9Y2S6 64 aaKnown RBP6.48□□□□□ -1.37
APAF1-213ENST00000555047 UPK3BL1B0FP48 263 aa6.47□□□□□ -1.37
APAF1-213ENST00000555047 UPK3BL2E5RIL1 263 aa6.47□□□□□ -1.37
APAF1-213ENST00000555047 RBAK-RBAKDNI3L0D1 243 aa6.47□□□□□ -1.37
APAF1-213ENST00000555047 KIR3DL1P43629 444 aa6.47□□□□□ -1.37
APAF1-213ENST00000555047 KRTAP4-12Q9BQ66 201 aa6.47□□□□□ -1.37
APAF1-213ENST00000555047 CCDC113Q9H0I3 377 aa6.47□□□□□ -1.37
APAF1-213ENST00000555047 CARS2Q9HA77 564 aaKnown RBP6.47□□□□□ -1.37
APAF1-213ENST00000555047 LMCD1Q9NZU5 365 aa6.47□□□□□ -1.37
APAF1-213ENST00000555047 CDK11AQ9UQ88 783 aaPredicted RBP6.47□□□□□ -1.37
APAF1-213ENST00000555047 MSRB2Q9Y3D2 182 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms