RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 IVNS1ABPQ9Y6Y0 642 aa9.4□□□□□ -0.9
ABCD4-220ENST00000553998 MYO5AQ9Y4I1 1855 aaKnown RBP9.4□□□□□ -0.91
ABCD4-220ENST00000553998 ATAD5Q96QE3 1844 aa9.4□□□□□ -0.91
ABCD4-220ENST00000553998 CDK5RAP2Q96SN8 1893 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 KIAA0355O15063 1070 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 COBLO75128 1261 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 CYP2E1P05181 493 aaPredicted RBP9.39□□□□□ -0.91
ABCD4-220ENST00000553998 ADCYAP1R1P41586 468 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 G3BP1Q13283 466 aaKnown RBP eCLIP9.39□□□□□ -0.91
ABCD4-220ENST00000553998 GRIN2CQ14957 1233 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 CERS3Q8IU89 383 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 ABRAQ8N0Z2 381 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 EXOC6Q8TAG9 804 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 MOV10L1Q9BXT6 1211 aaKnown RBP9.39□□□□□ -0.91
ABCD4-220ENST00000553998 TRIM34Q9BYJ4 488 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 HOXC10Q9NYD6 342 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 NRBP1Q9UHY1 535 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 PHF24Q9UPV7 400 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 MAST2Q6P0Q8 1798 aa9.39□□□□□ -0.91
ABCD4-220ENST00000553998 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.38□□□□□ -0.91
ABCD4-220ENST00000553998 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.38□□□□□ -0.91
ABCD4-220ENST00000553998 SURF6O75683 361 aaKnown RBP9.38□□□□□ -0.91
ABCD4-220ENST00000553998 ADORA2AP29274 412 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 GUCY1A2P33402 732 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 EPHB4P54760 987 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 TLE2Q04725 743 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 COG2Q14746 738 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 WDR78Q5VTH9 848 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 TMED8Q6PL24 325 aaPredicted RBP9.38□□□□□ -0.91
ABCD4-220ENST00000553998 DPP9Q86TI2 863 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 ERC1Q8IUD2 1116 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 SIRT2Q8IXJ6 389 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 USP38Q8NB14 1042 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 ACER1Q8TDN7 264 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 ATXN2LQ8WWM7 1075 aaKnown RBP9.38□□□□□ -0.91
ABCD4-220ENST00000553998 TOX2Q96NM4 488 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
ABCD4-220ENST00000553998 SERPINB13Q9UIV8 391 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 PCDHB15Q9Y5E8 787 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 SIPA1L1O43166 1804 aa9.38□□□□□ -0.91
ABCD4-220ENST00000553998 XIRP2A4UGR9 3374 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 NEFLP07196 543 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 CLTBP09497 229 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 HDAC1Q13547 482 aaPredicted RBP9.37□□□□□ -0.91
ABCD4-220ENST00000553998 ABCB5Q2M3G0 1257 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 CERKLQ49MI3 558 aaPredicted RBP9.37□□□□□ -0.91
ABCD4-220ENST00000553998 AKNAD1Q5T1N1 836 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 ANKRD33Q7Z3H0 272 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 MB21D1Q8N884 522 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 RNPC3Q96LT9 517 aaKnown RBP9.37□□□□□ -0.91
ABCD4-220ENST00000553998 SPATC1LQ9H0A9 340 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 MROH8Q9H579 483 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 ZNF576Q9H609 170 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 RPAP3Q9H6T3 665 aaPredicted RBP9.37□□□□□ -0.91
ABCD4-220ENST00000553998 SLC5A4Q9NY91 659 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 SAP30BPQ9UHR5 308 aaKnown RBP9.37□□□□□ -0.91
ABCD4-220ENST00000553998 FOCADQ5VW36 1801 aa9.37□□□□□ -0.91
ABCD4-220ENST00000553998 LTBP2Q14767 1821 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 A0A1W2PRG0 241 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 RAB11FIP3O75154 756 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 ERCC3P19447 782 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 DNAJB2P25686 324 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 SHMT1P34896 483 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 DYNLL1P63167 89 aaKnown RBP9.36□□□□□ -0.91
ABCD4-220ENST00000553998 GABPAQ06546 454 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 OS9Q13438 667 aaPredicted RBP9.36□□□□□ -0.91
ABCD4-220ENST00000553998 RAB3GAP1Q15042 981 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
ABCD4-220ENST00000553998 FAM47AQ5JRC9 791 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 CCDC158Q5M9N0 1113 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 PRAMEF19Q5SWL8 479 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 RASIP1Q5U651 963 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 MAML3Q96JK9 1138 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 FEZ1Q99689 392 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 TSEN34Q9BSV6 310 aaKnown RBP9.36□□□□□ -0.91
ABCD4-220ENST00000553998 CABP5Q9NP86 173 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 PIH1D3Q9NQM4 214 aaKnown RBP9.36□□□□□ -0.91
ABCD4-220ENST00000553998 SNRKQ9NRH2 765 aa9.36□□□□□ -0.91
ABCD4-220ENST00000553998 RAG1P15918 1043 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 CYP7A1P22680 504 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 DSG3P32926 999 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 ZAP70P43403 619 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 IRX6P78412 446 aaPredicted RBP9.35□□□□□ -0.91
ABCD4-220ENST00000553998 FPGSQ05932 587 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 FAAP100Q0VG06 881 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 TNNI3KQ59H18 835 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 TTC39AQ5SRH9 613 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 ERICH6BQ5W0A0 696 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 ANO1Q5XXA6 986 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 RNF180Q86T96 592 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 FERMT2Q96AC1 680 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 KIF1BPQ96EK5 621 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 ASB2Q96Q27 587 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 DBNDD2Q9BQY9 259 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 RWDD1Q9H446 243 aaPredicted RBP9.35□□□□□ -0.91
ABCD4-220ENST00000553998 DCTPP1Q9H773 170 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 ADAMTS5Q9UNA0 930 aa9.35□□□□□ -0.91
ABCD4-220ENST00000553998 DIS3Q9Y2L1 958 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms