RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 ADORA2AP29274 412 aa21.49■■□□□ 1.03
SYNE2-211ENST00000553801 GJC2Q5T442 439 aaPredicted RBP21.49■■□□□ 1.03
SYNE2-211ENST00000553801 TANGO6Q9C0B7 1094 aa21.49■■□□□ 1.03
SYNE2-211ENST00000553801 SPATC1LQ9H0A9 340 aa21.49■■□□□ 1.03
SYNE2-211ENST00000553801 MCM9Q9NXL9 1143 aa21.49■■□□□ 1.03
SYNE2-211ENST00000553801 ATP11BQ9Y2G3 1177 aa21.48■■□□□ 1.03
SYNE2-211ENST00000553801 SEPT4O43236 478 aa21.47■■□□□ 1.03
SYNE2-211ENST00000553801 ERCC3P19447 782 aa21.47■■□□□ 1.03
SYNE2-211ENST00000553801 HSP90AB4PQ58FF6 505 aa21.47■■□□□ 1.03
SYNE2-211ENST00000553801 SLC9C2Q5TAH2 1124 aa21.47■■□□□ 1.03
SYNE2-211ENST00000553801 ZNF697Q5TEC3 545 aa21.47■■□□□ 1.03
SYNE2-211ENST00000553801 SLC39A5Q6ZMH5 540 aa21.47■■□□□ 1.03
SYNE2-211ENST00000553801 MROH8Q9H579 483 aa21.47■■□□□ 1.03
SYNE2-211ENST00000553801 A0A1W2PRG0 241 aa21.46■■□□□ 1.03
SYNE2-211ENST00000553801 CEP85Q6P2H3 762 aa21.46■■□□□ 1.03
SYNE2-211ENST00000553801 TMEM179Q6ZVK1 233 aa21.46■■□□□ 1.03
SYNE2-211ENST00000553801 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.46■■□□□ 1.03
SYNE2-211ENST00000553801 ABRAQ8N0Z2 381 aa21.46■■□□□ 1.03
SYNE2-211ENST00000553801 GUCD1Q96NT3 240 aa21.46■■□□□ 1.03
SYNE2-211ENST00000553801 SWAP70Q9UH65 585 aa21.46■■□□□ 1.03
SYNE2-211ENST00000553801 EXOC6BQ9Y2D4 811 aa21.46■■□□□ 1.03
SYNE2-211ENST00000553801 ZNF236Q9UL36 1845 aa21.45■■□□□ 1.03
SYNE2-211ENST00000553801 PDE6AP16499 860 aa21.45■■□□□ 1.02
SYNE2-211ENST00000553801 DSG3P32926 999 aa21.45■■□□□ 1.02
SYNE2-211ENST00000553801 PLS1Q14651 629 aa21.45■■□□□ 1.02
SYNE2-211ENST00000553801 FAM161BQ96MY7 647 aa21.45■■□□□ 1.02
SYNE2-211ENST00000553801 SH2D4AQ9H788 454 aa21.45■■□□□ 1.02
SYNE2-211ENST00000553801 ARHGEF10LQ9HCE6 1279 aa21.45■■□□□ 1.02
SYNE2-211ENST00000553801 NAV1Q8NEY1 1877 aa21.44■■□□□ 1.02
SYNE2-211ENST00000553801 COBLO75128 1261 aa21.44■■□□□ 1.02
SYNE2-211ENST00000553801 MYCNP04198 464 aaPredicted RBP21.44■■□□□ 1.02
SYNE2-211ENST00000553801 NCAPG2Q86XI2 1143 aa21.44■■□□□ 1.02
SYNE2-211ENST00000553801 DCP1AQ9NPI6 582 aaPredicted RBP21.44■■□□□ 1.02
SYNE2-211ENST00000553801 PRDM5Q9NQX1 630 aaPredicted RBP21.44■■□□□ 1.02
SYNE2-211ENST00000553801 RLFQ13129 1914 aa21.44■■□□□ 1.02
SYNE2-211ENST00000553801 FLOT1O75955 427 aa21.43■■□□□ 1.02
SYNE2-211ENST00000553801 RLBP1P12271 317 aa21.43■■□□□ 1.02
SYNE2-211ENST00000553801 ANO1Q5XXA6 986 aa21.43■■□□□ 1.02
SYNE2-211ENST00000553801 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.43■■□□□ 1.02
SYNE2-211ENST00000553801 COL25A1Q9BXS0 654 aaPredicted RBP21.43■■□□□ 1.02
SYNE2-211ENST00000553801 ZNF532Q9HCE3 1301 aa21.43■■□□□ 1.02
SYNE2-211ENST00000553801 FCER1AP12319 257 aa21.42■■□□□ 1.02
SYNE2-211ENST00000553801 SNX17Q15036 470 aa21.42■■□□□ 1.02
SYNE2-211ENST00000553801 SHHQ15465 462 aa21.42■■□□□ 1.02
SYNE2-211ENST00000553801 CLASRPQ8N2M8 674 aaKnown RBP21.42■■□□□ 1.02
SYNE2-211ENST00000553801 RHPN1Q8TCX5 695 aa21.42■■□□□ 1.02
SYNE2-211ENST00000553801 SDR42E1Q8WUS8 393 aa21.42■■□□□ 1.02
SYNE2-211ENST00000553801 IL1RAPL2Q9NP60 686 aa21.42■■□□□ 1.02
SYNE2-211ENST00000553801 TMX2Q9Y320 296 aa21.42■■□□□ 1.02
SYNE2-211ENST00000553801 DNAH12Q6ZR08 3092 aa21.42■■□□□ 1.02
SYNE2-211ENST00000553801 SLC25A27O95847 323 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 ADCYAP1R1P41586 468 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 LRRC41Q15345 812 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 TRIM60Q495X7 471 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 PRAMEF19Q5SWL8 479 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 C1orf53Q5VUE5 145 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 BADQ92934 168 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 ATG4CQ96DT6 458 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 MAML3Q96JK9 1138 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 CCDC17Q96LX7 622 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 VCPKMTQ9H867 229 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 NRBP1Q9UHY1 535 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 LTBP2Q14767 1821 aa21.41■■□□□ 1.02
SYNE2-211ENST00000553801 GOLIM4O00461 696 aa21.4■■□□□ 1.02
SYNE2-211ENST00000553801 EVX2Q03828 476 aa21.4■■□□□ 1.02
SYNE2-211ENST00000553801 ICA1Q05084 483 aa21.4■■□□□ 1.02
SYNE2-211ENST00000553801 KIAA1755Q5JYT7 1200 aa21.4■■□□□ 1.02
SYNE2-211ENST00000553801 AMOTL1Q8IY63 956 aa21.4■■□□□ 1.02
SYNE2-211ENST00000553801 LCORLQ8N3X6 602 aa21.4■■□□□ 1.02
SYNE2-211ENST00000553801 SLC44A5Q8NCS7 719 aa21.4■■□□□ 1.02
SYNE2-211ENST00000553801 DNAJC2Q99543 621 aaKnown RBP21.4■■□□□ 1.02
SYNE2-211ENST00000553801 PDLIM7Q9NR12 457 aa21.4■■□□□ 1.02
SYNE2-211ENST00000553801 ZNFX1Q9P2E3 1918 aaKnown RBP21.39■■□□□ 1.02
SYNE2-211ENST00000553801 A0A0G2JMZ2 1700 aa21.39■■□□□ 1.01
SYNE2-211ENST00000553801 TCRBV5S4A2TA0A5A2 114 aa21.39■■□□□ 1.01
SYNE2-211ENST00000553801 WDR46O15213 610 aaKnown RBP21.39■■□□□ 1.01
SYNE2-211ENST00000553801 IFIT2P09913 472 aaKnown RBP21.39■■□□□ 1.01
SYNE2-211ENST00000553801 CYP2D6P10635 497 aa21.39■■□□□ 1.01
SYNE2-211ENST00000553801 SMAD3P84022 425 aaKnown RBP21.39■■□□□ 1.01
SYNE2-211ENST00000553801 SPICE1Q8N0Z3 855 aa21.39■■□□□ 1.01
SYNE2-211ENST00000553801 FERMT2Q96AC1 680 aa21.39■■□□□ 1.01
SYNE2-211ENST00000553801 KIF1BPQ96EK5 621 aa21.39■■□□□ 1.01
SYNE2-211ENST00000553801 DYNLL2Q96FJ2 89 aa21.39■■□□□ 1.01
SYNE2-211ENST00000553801 CDX2Q99626 313 aaPredicted RBP21.39■■□□□ 1.01
SYNE2-211ENST00000553801 SEMA6BQ9H3T3 888 aa21.39■■□□□ 1.01
SYNE2-211ENST00000553801 ATP8A2Q9NTI2 1148 aa21.39■■□□□ 1.01
SYNE2-211ENST00000553801 MYH8P13535 1937 aa21.38■■□□□ 1.01
SYNE2-211ENST00000553801 RARBP10826 455 aa21.38■■□□□ 1.01
SYNE2-211ENST00000553801 AKR1B1P15121 316 aa21.38■■□□□ 1.01
SYNE2-211ENST00000553801 FAM47AQ5JRC9 791 aa21.38■■□□□ 1.01
SYNE2-211ENST00000553801 C9orf50Q5SZB4 431 aa21.38■■□□□ 1.01
SYNE2-211ENST00000553801 SAMD1Q6SPF0 538 aaPredicted RBP21.38■■□□□ 1.01
SYNE2-211ENST00000553801 SIAH1Q8IUQ4 282 aa21.38■■□□□ 1.01
SYNE2-211ENST00000553801 ARMT1Q9H993 441 aa21.38■■□□□ 1.01
SYNE2-211ENST00000553801 TACC3Q9Y6A5 838 aa21.38■■□□□ 1.01
SYNE2-211ENST00000553801 SMCHD1A6NHR9 2005 aa21.38■■□□□ 1.01
SYNE2-211ENST00000553801 TMEM132BQ14DG7 1078 aa21.37■■□□□ 1.01
SYNE2-211ENST00000553801 RNF180Q86T96 592 aa21.37■■□□□ 1.01
SYNE2-211ENST00000553801 DDRGK1Q96HY6 314 aa21.37■■□□□ 1.01
SYNE2-211ENST00000553801 MMP19Q99542 508 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms