RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CCNA1P78396 465 aa19.09■□□□□ 0.65
ACTN1-209ENST00000553659 RAB3GAP1Q15042 981 aa19.09■□□□□ 0.65
ACTN1-209ENST00000553659 ZYXQ15942 572 aaKnown RBP19.09■□□□□ 0.65
ACTN1-209ENST00000553659 ABCB5Q2M3G0 1257 aa19.09■□□□□ 0.65
ACTN1-209ENST00000553659 CATSPERGQ6ZRH7 1159 aa19.09■□□□□ 0.65
ACTN1-209ENST00000553659 KIAA1683Q9H0B3 1180 aa19.09■□□□□ 0.65
ACTN1-209ENST00000553659 PFASO15067 1338 aa19.08■□□□□ 0.65
ACTN1-209ENST00000553659 CNMDO75829 334 aa19.08■□□□□ 0.64
ACTN1-209ENST00000553659 GLRX3O76003 335 aaKnown RBP19.08■□□□□ 0.64
ACTN1-209ENST00000553659 COL6A1P12109 1028 aa19.08■□□□□ 0.64
ACTN1-209ENST00000553659 SYN1P17600 705 aa19.08■□□□□ 0.64
ACTN1-209ENST00000553659 CCND3P30281 292 aaPredicted RBP19.08■□□□□ 0.64
ACTN1-209ENST00000553659 MAP2K5Q13163 448 aa19.08■□□□□ 0.64
ACTN1-209ENST00000553659 LHX8Q68G74 356 aa19.08■□□□□ 0.64
ACTN1-209ENST00000553659 AACSQ86V21 672 aa19.08■□□□□ 0.64
ACTN1-209ENST00000553659 SNX21Q969T3 373 aa19.08■□□□□ 0.64
ACTN1-209ENST00000553659 EDC3Q96F86 508 aaKnown RBP19.08■□□□□ 0.64
ACTN1-209ENST00000553659 CWC22Q9HCG8 908 aaKnown RBP19.08■□□□□ 0.64
ACTN1-209ENST00000553659 CABP5Q9NP86 173 aa19.08■□□□□ 0.64
ACTN1-209ENST00000553659 NAV1Q8NEY1 1877 aa19.07■□□□□ 0.64
ACTN1-209ENST00000553659 PLCD1P51178 756 aa19.07■□□□□ 0.64
ACTN1-209ENST00000553659 LBX2Q6XYB7 198 aa19.07■□□□□ 0.64
ACTN1-209ENST00000553659 HSCBQ8IWL3 235 aa19.07■□□□□ 0.64
ACTN1-209ENST00000553659 ACER1Q8TDN7 264 aa19.07■□□□□ 0.64
ACTN1-209ENST00000553659 RIOK1Q9BRS2 568 aaKnown RBP19.07■□□□□ 0.64
ACTN1-209ENST00000553659 SLC15A5A6NIM6 579 aa19.06■□□□□ 0.64
ACTN1-209ENST00000553659 IFIT2P09913 472 aaKnown RBP19.06■□□□□ 0.64
ACTN1-209ENST00000553659 VCAM1P19320 739 aa19.06■□□□□ 0.64
ACTN1-209ENST00000553659 SHMT1P34896 483 aa19.06■□□□□ 0.64
ACTN1-209ENST00000553659 MAGEA10P43363 369 aaPredicted RBP19.06■□□□□ 0.64
ACTN1-209ENST00000553659 TTF1Q15361 905 aaPredicted RBP19.06■□□□□ 0.64
ACTN1-209ENST00000553659 GPR153Q6NV75 609 aa19.06■□□□□ 0.64
ACTN1-209ENST00000553659 IL1RAPL2Q9NP60 686 aa19.06■□□□□ 0.64
ACTN1-209ENST00000553659 MYH8P13535 1937 aa19.06■□□□□ 0.64
ACTN1-209ENST00000553659 MAGEB6P1A0A0J9YX57 407 aa19.05■□□□□ 0.64
ACTN1-209ENST00000553659 POLR3DP05423 398 aaPredicted RBP19.05■□□□□ 0.64
ACTN1-209ENST00000553659 PTPREP23469 700 aa19.05■□□□□ 0.64
ACTN1-209ENST00000553659 GUCY1A2P33402 732 aa19.05■□□□□ 0.64
ACTN1-209ENST00000553659 MFSD14CQ5VZR4 134 aa19.05■□□□□ 0.64
ACTN1-209ENST00000553659 TRIM6-TRIM34B2RNG4 842 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 GABPAQ06546 454 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 LRIT3Q3SXY7 679 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 WDR78Q5VTH9 848 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 TDHQ8IZJ6 230 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 SLC17A8Q8NDX2 589 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 BCL11AQ9H165 835 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 RPAP3Q9H6T3 665 aaPredicted RBP19.04■□□□□ 0.64
ACTN1-209ENST00000553659 ECHDC1Q9NTX5 307 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 FLRT1Q9NZU1 646 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 BTBD7Q9P203 1132 aa19.04■□□□□ 0.64
ACTN1-209ENST00000553659 HOXC6P09630 235 aa19.03■□□□□ 0.64
ACTN1-209ENST00000553659 MCCP23508 829 aa19.03■□□□□ 0.64
ACTN1-209ENST00000553659 RABEP1Q15276 862 aa19.03■□□□□ 0.64
ACTN1-209ENST00000553659 LRRC26Q2I0M4 334 aa19.03■□□□□ 0.64
ACTN1-209ENST00000553659 SLC9C2Q5TAH2 1124 aa19.03■□□□□ 0.64
ACTN1-209ENST00000553659 CRNKL1Q9BZJ0 848 aaKnown RBP19.03■□□□□ 0.64
ACTN1-209ENST00000553659 UBE2OQ9C0C9 1292 aaKnown RBP19.03■□□□□ 0.64
ACTN1-209ENST00000553659 IVNS1ABPQ9Y6Y0 642 aa19.03■□□□□ 0.64
ACTN1-209ENST00000553659 RLFQ13129 1914 aa19.03■□□□□ 0.64
ACTN1-209ENST00000553659 ZNFX1Q9P2E3 1918 aaKnown RBP19.03■□□□□ 0.64
ACTN1-209ENST00000553659 SPDYE16A6NNV3 312 aaPredicted RBP19.02■□□□□ 0.64
ACTN1-209ENST00000553659 PDE6AP16499 860 aa19.02■□□□□ 0.64
ACTN1-209ENST00000553659 ATP2B2Q01814 1243 aa19.02■□□□□ 0.64
ACTN1-209ENST00000553659 GRB14Q14449 540 aa19.02■□□□□ 0.64
ACTN1-209ENST00000553659 SEPT2Q15019 361 aa19.02■□□□□ 0.64
ACTN1-209ENST00000553659 PI4K2BQ8TCG2 481 aa19.02■□□□□ 0.64
ACTN1-209ENST00000553659 USP26Q9BXU7 913 aa19.02■□□□□ 0.64
ACTN1-209ENST00000553659 MCM9Q9NXL9 1143 aa19.02■□□□□ 0.64
ACTN1-209ENST00000553659 MSCO60682 206 aa19.01■□□□□ 0.63
ACTN1-209ENST00000553659 COG2Q14746 738 aa19.01■□□□□ 0.63
ACTN1-209ENST00000553659 NPLOC4Q8TAT6 608 aa19.01■□□□□ 0.63
ACTN1-209ENST00000553659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.01■□□□□ 0.63
ACTN1-209ENST00000553659 RILPL2Q969X0 211 aa19.01■□□□□ 0.63
ACTN1-209ENST00000553659 ESYT1Q9BSJ8 1104 aa19.01■□□□□ 0.63
ACTN1-209ENST00000553659 HOXC10Q9NYD6 342 aa19.01■□□□□ 0.63
ACTN1-209ENST00000553659 DDX20Q9UHI6 824 aaKnown RBP19.01■□□□□ 0.63
ACTN1-209ENST00000553659 BAZ2AQ9UIF9 1905 aaKnown RBP19■□□□□ 0.63
ACTN1-209ENST00000553659 A0A1W2PRG0 241 aa19■□□□□ 0.63
ACTN1-209ENST00000553659 HIP1O00291 1037 aa19■□□□□ 0.63
ACTN1-209ENST00000553659 CHMLP26374 656 aa19■□□□□ 0.63
ACTN1-209ENST00000553659 DEFB123Q8N688 67 aa19■□□□□ 0.63
ACTN1-209ENST00000553659 LPAR1Q92633 364 aa19■□□□□ 0.63
ACTN1-209ENST00000553659 ZNF532Q9HCE3 1301 aa19■□□□□ 0.63
ACTN1-209ENST00000553659 TCRBV5S4A2TA0A5A2 114 aa18.99■□□□□ 0.63
ACTN1-209ENST00000553659 MPHOSPH10O00566 681 aaKnown RBP18.99■□□□□ 0.63
ACTN1-209ENST00000553659 STRNO43815 780 aa18.99■□□□□ 0.63
ACTN1-209ENST00000553659 IGHA2P01877 340 aa18.99■□□□□ 0.63
ACTN1-209ENST00000553659 CNGA1P29973 690 aa18.99■□□□□ 0.63
ACTN1-209ENST00000553659 EVX2Q03828 476 aa18.99■□□□□ 0.63
ACTN1-209ENST00000553659 RUFY2Q8WXA3 655 aa18.99■□□□□ 0.63
ACTN1-209ENST00000553659 SENP6Q9GZR1 1112 aaPredicted RBP18.99■□□□□ 0.63
ACTN1-209ENST00000553659 DCP1AQ9NPI6 582 aaPredicted RBP18.99■□□□□ 0.63
ACTN1-209ENST00000553659 ZNF236Q9UL36 1845 aa18.99■□□□□ 0.63
ACTN1-209ENST00000553659 PARP14Q460N5 1801 aa18.98■□□□□ 0.63
ACTN1-209ENST00000553659 GOLIM4O00461 696 aa18.98■□□□□ 0.63
ACTN1-209ENST00000553659 CYP2C19P33261 490 aa18.98■□□□□ 0.63
ACTN1-209ENST00000553659 SLC4A3P48751 1232 aa18.98■□□□□ 0.63
ACTN1-209ENST00000553659 TMEM179Q6ZVK1 233 aa18.98■□□□□ 0.63
ACTN1-209ENST00000553659 DPP9Q86TI2 863 aa18.98■□□□□ 0.63
ACTN1-209ENST00000553659 SDR42E1Q8WUS8 393 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms