RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHD8-205ENST00000553651 PBX4Q9BYU1 374 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 PRDM12Q9H4Q4 367 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 RPAP3Q9H6T3 665 aaPredicted RBP11.84□□□□□ -0.51
CHD8-205ENST00000553651 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 MYH1P12882 1939 aa11.84□□□□□ -0.51
CHD8-205ENST00000553651 A0A1W2PQ45 241 aaPredicted RBP11.83□□□□□ -0.52
CHD8-205ENST00000553651 A0A1W2PQY0 241 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 GRXCR1A8MXD5 290 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 BAG3O95817 575 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 RAG1P15918 1043 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 ERCC3P19447 782 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 USP14P54578 494 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 DYNLL1P63167 89 aaKnown RBP11.83□□□□□ -0.52
CHD8-205ENST00000553651 ANKRD33Q7Z3H0 272 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 PPM1EQ8WY54 764 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 MAML3Q96JK9 1138 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 NEUROD6Q96NK8 337 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 NECAB3Q96P71 396 aaPredicted RBP11.83□□□□□ -0.52
CHD8-205ENST00000553651 FEZ1Q99689 392 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 SPATC1LQ9H0A9 340 aa11.83□□□□□ -0.52
CHD8-205ENST00000553651 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
CHD8-205ENST00000553651 ROBO3Q96MS0 1386 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 TCF20Q9UGU0 1960 aaKnown RBP11.82□□□□□ -0.52
CHD8-205ENST00000553651 PQBP1O60828 265 aaKnown RBP11.82□□□□□ -0.52
CHD8-205ENST00000553651 PGK1P00558 417 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
CHD8-205ENST00000553651 CYP2E1P05181 493 aaPredicted RBP11.82□□□□□ -0.52
CHD8-205ENST00000553651 ALDH1L2Q3SY69 923 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 KIAA1755Q5JYT7 1200 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 TMEM240Q5SV17 173 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 ABRAQ8N0Z2 381 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 TOX2Q96NM4 488 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 GAS2L1Q99501 681 aaPredicted RBP11.82□□□□□ -0.52
CHD8-205ENST00000553651 NOL10Q9BSC4 688 aaKnown RBP11.82□□□□□ -0.52
CHD8-205ENST00000553651 EHD4Q9H223 541 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 SNRKQ9NRH2 765 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 TBX21Q9UL17 535 aa11.82□□□□□ -0.52
CHD8-205ENST00000553651 A0A1W2PRG0 241 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 ADAMTS4O75173 837 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 HLA-DOAP06340 250 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 UQCRFS1P1P0C7P4 283 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 BMP1P13497 986 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 TAL1P17542 331 aaPredicted RBP11.81□□□□□ -0.52
CHD8-205ENST00000553651 SHMT1P34896 483 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 RAB3GAP1Q15042 981 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 TRIM34Q9BYJ4 488 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 XPNPEP3Q9NQH7 507 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 TMEM39AQ9NV64 488 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 NRBP1Q9UHY1 535 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 ARIH1Q9Y4X5 557 aaPredicted RBP11.81□□□□□ -0.52
CHD8-205ENST00000553651 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
CHD8-205ENST00000553651 MUC6Q6W4X9 2439 aa11.8□□□□□ -0.52
CHD8-205ENST00000553651 SRGAP3O43295 1099 aa11.8□□□□□ -0.52
CHD8-205ENST00000553651 TIMP1P01033 207 aa11.8□□□□□ -0.52
CHD8-205ENST00000553651 ZNF865P0CJ78 1059 aaPredicted RBP11.8□□□□□ -0.52
CHD8-205ENST00000553651 COG2Q14746 738 aa11.8□□□□□ -0.52
CHD8-205ENST00000553651 CCDC85BQ15834 202 aaPredicted RBP11.8□□□□□ -0.52
CHD8-205ENST00000553651 ABCB5Q2M3G0 1257 aa11.8□□□□□ -0.52
CHD8-205ENST00000553651 GORABQ5T7V8 394 aa11.8□□□□□ -0.52
CHD8-205ENST00000553651 CCSAPQ6IQ19 270 aaPredicted RBP11.8□□□□□ -0.52
CHD8-205ENST00000553651 SLC44A5Q8NCS7 719 aa11.8□□□□□ -0.52
CHD8-205ENST00000553651 LENG1Q96BZ8 264 aaPredicted RBP11.8□□□□□ -0.52
CHD8-205ENST00000553651 PIH1D3Q9NQM4 214 aaKnown RBP11.8□□□□□ -0.52
CHD8-205ENST00000553651 SERPINB13Q9UIV8 391 aa11.8□□□□□ -0.52
CHD8-205ENST00000553651 GBF1Q92538 1859 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 RARBP10826 455 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 GABPAQ06546 454 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 SEPT2Q15019 361 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 CERKLQ49MI3 558 aaPredicted RBP11.79□□□□□ -0.52
CHD8-205ENST00000553651 MFSD5Q6N075 450 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 ATF7IPQ6VMQ6 1270 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 KLHDC9Q8NEP7 349 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 TSEN34Q9BSV6 310 aaKnown RBP11.79□□□□□ -0.52
CHD8-205ENST00000553651 C1QTNF1Q9BXJ1 281 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 MROH8Q9H579 483 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 HOXC10Q9NYD6 342 aa11.79□□□□□ -0.52
CHD8-205ENST00000553651 CXXC1Q9P0U4 656 aaPredicted RBP11.79□□□□□ -0.52
CHD8-205ENST00000553651 IGSF3O75054 1194 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 DSG3P32926 999 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 CDK7P50613 346 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 PLCD1P51178 756 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 ACLYP53396 1101 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 EVX2Q03828 476 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 ZNF792Q3KQV3 632 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 RNF180Q86T96 592 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 ATG4CQ96DT6 458 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 LRFN3Q9BTN0 628 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 SMC4Q9NTJ3 1288 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 NOB1Q9ULX3 412 aaKnown RBP11.78□□□□□ -0.52
CHD8-205ENST00000553651 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
CHD8-205ENST00000553651 YBX2Q9Y2T7 364 aaKnown RBP11.78□□□□□ -0.52
CHD8-205ENST00000553651 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.52
CHD8-205ENST00000553651 PRRC2BQ5JSZ5 2229 aaKnown RBP11.77□□□□□ -0.53
CHD8-205ENST00000553651 PNMA6EA0A0J9YXQ4 647 aa11.77□□□□□ -0.53
CHD8-205ENST00000553651 DCDC2CA8MYV0 355 aa11.77□□□□□ -0.53
CHD8-205ENST00000553651 CSF2RAP15509 400 aa11.77□□□□□ -0.53
CHD8-205ENST00000553651 CYP7A1P22680 504 aa11.77□□□□□ -0.53
CHD8-205ENST00000553651 ZAP70P43403 619 aa11.77□□□□□ -0.53
CHD8-205ENST00000553651 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms