RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 GPR142Q7Z601 462 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 AMOTL1Q8IY63 956 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
ACTN1-208ENST00000553370 DDX27Q96GQ7 796 aaKnown RBP12.01□□□□□ -0.49
ACTN1-208ENST00000553370 TXNRD2Q9NNW7 524 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 IL1RAPL2Q9NP60 686 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 STAP2Q9UGK3 403 aa12.01□□□□□ -0.49
ACTN1-208ENST00000553370 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
ACTN1-208ENST00000553370 PARP14Q460N5 1801 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 MYH4Q9Y623 1939 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 RLBP1P12271 317 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 XRCC5P13010 732 aaKnown RBP12□□□□□ -0.49
ACTN1-208ENST00000553370 SYN1P17600 705 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 CNGA1P29973 690 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 JAG1P78504 1218 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 TMED8Q6PL24 325 aaPredicted RBP12□□□□□ -0.49
ACTN1-208ENST00000553370 CLASRPQ8N2M8 674 aaKnown RBP12□□□□□ -0.49
ACTN1-208ENST00000553370 TANGO6Q9C0B7 1094 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 EHD4Q9H223 541 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 PORCNQ9H237 461 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 EMILIN3Q9NT22 766 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 MCM9Q9NXL9 1143 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 GJD2Q9UKL4 321 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 RABGAP1Q9Y3P9 1069 aa12□□□□□ -0.49
ACTN1-208ENST00000553370 LAMA3Q16787 3333 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 GOLIM4O00461 696 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 VCAM1P19320 739 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 ATP2B2Q01814 1243 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 SLC9C2Q5TAH2 1124 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 METTL16Q86W50 562 aaKnown RBP11.99□□□□□ -0.49
ACTN1-208ENST00000553370 PANK1Q8TE04 598 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 DDRGK1Q96HY6 314 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 RPAP3Q9H6T3 665 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-208ENST00000553370 ANTXR1Q9H6X2 564 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 RBPJLQ9UBG7 517 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 ARIH1Q9Y4X5 557 aaPredicted RBP11.99□□□□□ -0.49
ACTN1-208ENST00000553370 SMCHD1A6NHR9 2005 aa11.99□□□□□ -0.49
ACTN1-208ENST00000553370 ZNF236Q9UL36 1845 aa11.98□□□□□ -0.49
ACTN1-208ENST00000553370 A0A0G2JMZ2 1700 aa11.98□□□□□ -0.49
ACTN1-208ENST00000553370 PDE6AP16499 860 aa11.98□□□□□ -0.49
ACTN1-208ENST00000553370 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
ACTN1-208ENST00000553370 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
ACTN1-208ENST00000553370 CCL14Q16627 93 aa11.98□□□□□ -0.49
ACTN1-208ENST00000553370 TATDN1Q6P1N9 297 aa11.98□□□□□ -0.49
ACTN1-208ENST00000553370 UBE2OQ9C0C9 1292 aaKnown RBP11.98□□□□□ -0.49
ACTN1-208ENST00000553370 KIAA1683Q9H0B3 1180 aa11.98□□□□□ -0.49
ACTN1-208ENST00000553370 OGDHLQ9ULD0 1010 aa11.98□□□□□ -0.49
ACTN1-208ENST00000553370 ZNF532Q9HCE3 1301 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 RAD21O60216 631 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 CCND3P30281 292 aaPredicted RBP11.97□□□□□ -0.49
ACTN1-208ENST00000553370 PLS1Q14651 629 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 Q3C1V9 767 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 MAP3K21Q5TCX8 1036 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 RHPN1Q8TCX5 695 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 ACER1Q8TDN7 264 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 KIF1BPQ96EK5 621 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 EDC3Q96F86 508 aaKnown RBP11.97□□□□□ -0.49
ACTN1-208ENST00000553370 C12orf42Q96LP6 360 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.97□□□□□ -0.495e-6■■■■■ 34.6
ACTN1-208ENST00000553370 SH2D4AQ9H788 454 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 PRKAG2Q9UGJ0 569 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 COL6A3P12111 3177 aa11.97□□□□□ -0.49
ACTN1-208ENST00000553370 RLFQ13129 1914 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 ZBED9Q6R2W3 1325 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 SLC15A5A6NIM6 579 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 ZMYND10O75800 440 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 SHMT1P34896 483 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 MAGEA10P43363 369 aaPredicted RBP11.96□□□□□ -0.49
ACTN1-208ENST00000553370 EVX2Q03828 476 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 SEPT2Q15019 361 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 MORN1Q5T089 497 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 CATSPERGQ6ZRH7 1159 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 DPP9Q86TI2 863 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 LRCH3Q96II8 777 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.49
ACTN1-208ENST00000553370 ARHGEF10LQ9HCE6 1279 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 SLC5A4Q9NY91 659 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 DDX19BQ9UMR2 479 aa11.96□□□□□ -0.49
ACTN1-208ENST00000553370 MCM3APO60318 1980 aa11.96□□□□□ -0.5
ACTN1-208ENST00000553370 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
ACTN1-208ENST00000553370 MYO9BQ13459 2157 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 SPDYE16A6NNV3 312 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-208ENST00000553370 MSCO60682 206 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 PLCD1P51178 756 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 DIEXFQ68CQ4 756 aaKnown RBP11.95□□□□□ -0.5
ACTN1-208ENST00000553370 TMEM179Q6ZVK1 233 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 SDR42E1Q8WUS8 393 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 LBHD1Q9BQE6 289 aaPredicted RBP11.95□□□□□ -0.5
ACTN1-208ENST00000553370 RIOK1Q9BRS2 568 aaKnown RBP11.95□□□□□ -0.5
ACTN1-208ENST00000553370 PRO3102Q9H379 93 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 PAG1Q9NWQ8 432 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 SWAP70Q9UH65 585 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 A0A0C4DFX4 3053 aa11.95□□□□□ -0.5
ACTN1-208ENST00000553370 PFASO15067 1338 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 KBTBD13C9JR72 458 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 SOX1O00570 391 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-208ENST00000553370 FLOT1O75955 427 aa11.94□□□□□ -0.5
ACTN1-208ENST00000553370 MBD4O95243 580 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms